prot_P-littoralis_Contig12.137.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.137.3
Unique Nameprot_P-littoralis_Contig12.137.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length171
Homology
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 2.670e-116
Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170
            MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRN+QEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTH+HLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ
Sbjct:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.020e-95
Identity = 133/168 (79.17%), Postives = 154/168 (91.67%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTLRPYL  IR TLDA+LCLRNFPSQTVERHNKPEVE +SSKELLLNP+TICRN+QE+CL+E+S+NSVRVSI VKQADEIE+ILC KFT FLMQR+EQF+VMRRK A G+DISFL+TH HLE +WKHKL+DF+I+FMEDIDKEISGMKIAINAR RI+A +++ QF
Sbjct:    1 MANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 275 bits (703), Expect = 1.560e-92
Identity = 133/168 (79.17%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYL AIR +LDAALCLRNFPSQ VERHNKPEVE R SKELLLNP+ I RN+ EKCLIE S+NS RVSI +KQADEIETILCHKFT FLMQRAEQF++MRR P EG+ +SFL+THTHLE L+KHKLIDFIIQFMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 MANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNENEKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 273 bits (697), Expect = 1.280e-91
Identity = 127/168 (75.60%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE R SKEL+L P+ ICRN+ EKC IE S+NS RVSI +KQADEIE+ILCHKF+ FLMQRAEQF+++RRKP EG+D+SFL+TH+HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    1 MANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNENEKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 271 bits (693), Expect = 5.380e-91
Identity = 129/168 (76.79%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLDAALCL+NFPSQ VERHNKPE+E   S+ELLLNPV ICRN+ EKC IE S+NS RVSI++KQADEIETILCHKF+ FLMQRAEQF++MRRK  EG+ ISFL+ HTHLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    1 MANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNENEKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.410e-90
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRN+ E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ HTHLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:   50 MANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 269 bits (688), Expect = 2.910e-90
Identity = 130/167 (77.84%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYL AIR +LD+ALCLRNFPSQ VERHNKPEVE R SKELLLNP+ ICRN+ EKCLIE SVNS RVSI +KQADEIETILCHKF  FLMQRA+QF++MRR P EG+D+SFLV HTHLE ++KHKLIDFII FMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNETEKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.270e-90
Identity = 125/169 (73.96%), Postives = 149/169 (88.17%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFV 169
            MA+TL+PYL  +R TL+A LCLRNFPSQTVERHNKPEVE R SKELLLNP+TICR D+E+CLIE SVNSVR+SI +KQADE+E +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK KLIDF+IQFMEDIDKEIS MK+A+N+R R +AQ+F+ +FV
Sbjct:    1 MASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDKERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREFV 169          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.720e-89
Identity = 124/168 (73.81%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MA TLRPYLN IR TLDAALCLRNFPSQ VERHNKPE+E + +KELLLNP+TICR   E+CLIE SVNSVR+SI +KQADEIE +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK+KLIDFII FMEDID+EIS MK+A+NAR R++A++F+ +F
Sbjct:   11 MAATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKTERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178          
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 270 bits (690), Expect = 4.760e-89
Identity = 128/167 (76.65%), Postives = 145/167 (86.83%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRN+ E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ HTHLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.137.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI2.670e-11698.82Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA1.020e-9579.17Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A2D4BNX3_PYTIN1.560e-9279.17Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A067C4Y9_SAPPC1.280e-9175.60Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
W4GJL2_9STRA5.380e-9176.79Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
A0A024TP77_9STRA1.410e-9076.79Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
K3WN29_GLOUD2.910e-9077.84Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
A0A7S2CG59_9STRA6.270e-9073.96Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A7S2BQQ1_9STRA1.720e-8973.81Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A3R6WI01_9STRA4.760e-8976.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 1..165
e-value: 3.6E-79
score: 264.2
IPR008384Actin-related protein 2/3 complex subunit 4PIRSFPIRSF039100ARPC4coord: 1..170
e-value: 6.3E-84
score: 277.8
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 1..166
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..168
e-value: 2.0E-82
score: 276.7
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 3..168
NoneNo IPR availablePANTHERPTHR22629:SF1ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4coord: 1..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:579727..598444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.137.3mRNA_P-littoralis_Contig12.137.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 579344..600255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.137.3 ID=prot_P-littoralis_Contig12.137.3|Name=mRNA_P-littoralis_Contig12.137.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=171bp
MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNP
VTICRNDQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQ
FVVMRRKPAEGFDISFLVTHTHLEKLWKHKLIDFIIQFMEDIDKEISGMK
IAINARGRIIAQQFMLQFVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR034666ARPC2/4