prot_P-littoralis_Contig82.100.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig82.100.1
Unique Nameprot_P-littoralis_Contig82.100.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length226
Homology
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BLAST of mRNA_P-littoralis_Contig82.100.1 vs. uniprot
Match: D7FJI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI4_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.120e-36
Identity = 102/221 (46.15%), Postives = 124/221 (56.11%), Query Frame = 0 
Query:   13 LGVRKPERRRRSFL-----GRLACFSTASSAEENVASPTKEHAAQLQQKHQGLRQPSFGSLTLPRWTPPLSPSSKSSTKLIRSLSSSPPALLGKEN---QLVSPEDALAALRTPGMPALEDLRRIRQMAGAASRKWLRDFLIRGGRRHVNDKVSEMAALMDKEANTRPRKGVLVPSVFNRRKSDCNGNGKGGLPPRAPALREIAEVREELMRLVLFLHLRE 225
            L  +K   RRRS L     GR+     +  A +N  +   +  +  QQK    R PSFG     +WTPPLSP +                   KEN   +  +PE A+  LRT G+P L DL+ IRQMAGAASR W+RDFLIRGGR  VN+KV EMA L + EA     K  L+P VF        G+GKG LPPR P  RE++EVREELM+LVLFLHLRE
Sbjct:   11 LSTKKRPHRRRSLLAFASNGRVTSSPASLGAFQN--NRLSQGTSTNQQKRL-QRAPSFGGF---KWTPPLSPGND------------------KENAELKPTTPEQAIVLLRTRGLPPLADLKSIRQMAGAASRTWIRDFLIRGGRGCVNEKVREMAQL-EMEARKHRPKLALLPKVF--------GSGKGDLPPR-PTPREVSEVREELMQLVLFLHLRE 197
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI4_ECTSI1.120e-3646.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig82contigP-littoralis_Contig82:474172..489661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig82.100.1mRNA_P-littoralis_Contig82.100.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig82 473880..491892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig82.100.1 ID=prot_P-littoralis_Contig82.100.1|Name=mRNA_P-littoralis_Contig82.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=226bp
MEFFAQQPDCSTLGVRKPERRRRSFLGRLACFSTASSAEENVASPTKEHA
AQLQQKHQGLRQPSFGSLTLPRWTPPLSPSSKSSTKLIRSLSSSPPALLG
KENQLVSPEDALAALRTPGMPALEDLRRIRQMAGAASRKWLRDFLIRGGR
RHVNDKVSEMAALMDKEANTRPRKGVLVPSVFNRRKSDCNGNGKGGLPPR
APALREIAEVREELMRLVLFLHLRE*
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