mRNA_P-littoralis_Contig82.57.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.300e-76 Identity = 196/437 (44.85%), Postives = 251/437 (57.44%), Query Frame = 1
Query: 724 KQPKARAPRKRRTIKGERNSXXXXXXXXXXXXXXXLAEEPAGESTGASKSKPPPVEIAAGRKAAFERARLAGVARRAKEGGGVRPEATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSGASTFQWQEAVTSSQFTWKELSGPALPEGFPSGSGTDGRESGAIASAEATASSANAKKVKAARRKGQRQRAQ---QGHHHPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIEIDLNQFGPEQVQECAHEVVFHLYKQFRPMFGGKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQY 2025
K PKA+APRKRR +GE + E G + A+++ P + RKA+FERAR AGVARR +EGGGV ++ S XXXXX XXXXX V S F W+EA T FTW++ P +P+ F GSG DG + GA Q HPVLG VADL +KRVYV+S EAL K RVWE+ARTLRPVHA EIF+ K IEA++L++++ K ++ L Q YV G+VDGQHRL AL +L++ +W+ SERNVVVEVFD KDE++IEEL+AEIN+AEP++IDL+ GP++V +CA EVV HLYK L+R+G+IERHEL+ P LLLD+LLRVNEM+S+R++ W LMVG EEG Y
Sbjct: 323 KAPKAKAPRKRRGGQGESSRSPNAGPKDA---------ERKGAAANAAEAGTDP-RVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEG----------SVPDESPFPWKEAETP-PFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKE----EKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLYK------------------------LIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCY 710
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE) HSP 1 Score: 251 bits (640), Expect = 4.780e-69 Identity = 182/382 (47.64%), Postives = 229/382 (59.95%), Query Frame = 1
Query: 724 KQPKARAPRKRRTIKGERNSXXXXXXXXXXXXXXXLAEEPAGESTGASKSKPPPVEIAAGRKAAFERARLAGVARRAKEGGGVRPEATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSGASTFQWQEAVTSSQFTWKELSGPALPEGFPSGSGTDGRESGAIASAEA--TASSANAKKVKAARRKGQRQRAQQGHHHPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQK--------------AKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIEIDLNQFGPEQVQECAHEVVFHLYKQFRP 1821
K PKA+APRKRR G+ S A + A E T + RKA+FERAR AGVARR ++GGGV ++ S XXXXXXXXXXXX S F W+EA T FTW++ P +P+ F +GSG DG + GA A AEA T A + A+ + +GH PVLG VADL +KRVYVTS EAL K RVWE+ARTLRPVHA EIF+ K IEA++L++++ AK MPGVITLY+RPLLPL Q YV G+VDGQHRL AL +L++ +W++SERNVV+EVFD KDE++IEEL AEP++IDL+ GP++V +CA EVV HLYK +P
Sbjct: 323 KAPKAKAPRKRRG--GQSESARSPNAGPTDAERKRAAADAAEEGTDP--------RVPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGSEADSXXXXXXXXXXXX------------SPFPWKEAETP-PFTWQDPDAPVVPKPFLAGSGADGEKGGAAAGAEAKITGGXXKASSLAASESSSCERIVVEGH--PVLGFLVADLKYKRVYVTSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVTEDGKEEKDENLVAKGMPGVITLYRRPLLPLTKRNQSYVLGVVDGQHRLRALKMLADAKMWDQSERNVVIEVFDAKDERDIEEL------AEPVQIDLDIPGPQEVYKCAEEVVLHLYKDTQP 673
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A0G4J5N5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5N5_PLABS) HSP 1 Score: 130 bits (326), Expect = 8.820e-30 Identity = 86/267 (32.21%), Postives = 143/267 (53.56%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIE-IDLNQFGPEQV-QECAHEVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEKAWM 2106
HPVLG D+T+KRV+ TS AL VW + RTL AVEI Q +++ +PGVITL+++ S K G+VDGQHRL A+ LL +G W+ N+ V++F D+ +I +LF++IN+AEP+ +DL + G + +E + + + +F MF ++ R P+L+ ++ + +S ++++ + N L YLL N + +R QW + R+ AL KA++N +L ++K+W+
Sbjct: 46 HPVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEISQ---------HLKQRPRLPGVITLFEKV-----SSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINRAEPVLLVDLPESGADDTTKEKLNRAIEQIRAKFPTMFRPSQQCRPPHLNVDVLRDEIWQSDLLDKVPVDN---LSQYLLDANHAMHERTDAQWRKALS------GKSRAFKKALTKARDNACYLALDKSWL 289
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A5J4YPW0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPW0_PORPP) HSP 1 Score: 131 bits (329), Expect = 1.070e-28 Identity = 97/268 (36.19%), Postives = 144/268 (53.73%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPI-EIDLN--QFGPEQVQECAHEVVFHLYKQFRPMFGGK-RIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEKAWM 2106
H G VADL +K+VY+ S E L VW + R RP+ A I Q K R + +PGVI+ Y+ S + GI+DGQHR GAL+ ++E W S ++V+VEVF K+E +I+ELF EINKAEP+ ++DL E+ +E + V L QF MF R R P++HA ++ L +S + R+ + + +L+ LLRVN +++ W V + G+ L ALKKA + F+LG+++ WM
Sbjct: 232 HKHFGRLVADLGYKKVYLASIERLRGLDVWRRNRAYRPMRASAIAQDKINSGWRKSV-----LPGVISCYE-----CASNGET---GILDGQHRRGALMYMAERSEWPES-KSVLVEVFQLKNEDQIKELFIEINKAEPVLDVDLPGLSVADEEAKEAINYAVGQLEAQFEMMFKQTIRCRPPHVHADKLRDELFQSDFMGRYNAFTGKEVLESLLRVNSEMAECNYSSW---VNKWNGKDYM---LKKALKKASDTGFYLGVDRQWM 479
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.750e-26 Identity = 89/270 (32.96%), Postives = 142/270 (52.59%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIEI-DLNQFGPEQVQECAHEVVFHLYKQFRPMFGGK-RIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLV--ALKKAKNNRFWLGMEKAWMVV 2112
HPV G V DLT+K++Y TS + L +WE+ R R A + A I+A +LQ KA ++PG +T+Y+ E+ G++DGQHRLGAL LL + G+ ++VEVF K +++++ LF EIN A+P+ I D+ +E + L +F MF R P+++ ++ L +S ++ R N + LL+++ N++L+ R+ W Y R+ V A+ KA++N F+LGME WM V
Sbjct: 107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLL--ANDIKA-KLQEGKALTLPGSLTVYEM------GEE----IGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRA-------YKGRKPEAVEKAVLKARDNHFFLGMEPNWMDV 356
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A7S2WKL6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKL6_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.500e-25 Identity = 89/280 (31.79%), Postives = 143/280 (51.07%), Query Frame = 1
Query: 1318 PVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAK----SMPGVITLYQRPLLPLRSEKQPYV-----------FGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPI-EIDLNQFGPEQVQECAHEVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEKAWM 2106
P LG + +L K++Y+ +L VWE+ R R AV KI A++L K+ S PGVIT+Y + +P S +Q +GI+DGQHR+GA+ L +G ++ + V+VEV++ +E+ + ELF +INKAEP+ ++DL E +E + V L QF F + R+PN++ ++ + RS +I RH + + LL+ LL+ N+ LS+R W Y + AL K + F+LG+E+ W+
Sbjct: 135 PFLGTCIGELGPKKLYLMDIPSLKSIPVWERQRVYRKERAV------KIAADKLSKLKSSGQPISFPGVITIYAKGWVPPLSPEQIAGDKAALAAARDRYGILDGQHRVGAMRQLHRQGHFDET---VLVEVYELANEELVSELFTDINKAEPVKDVDLPGSVNEVEREILNSAVSALAGQFPAFFKESTKPRKPNVNFDNLRDAIFRSHLISRHGVRTDQQLLELLLQKNDELSRRPDSDWLT--------YNKSKGFPTALNKCRTQGFYLGLEEDWL 397
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A7S0ZE62_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE62_9RHOD) HSP 1 Score: 118 bits (296), Expect = 3.170e-25 Identity = 88/276 (31.88%), Postives = 133/276 (48.19%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFG-------------IVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIE-IDLNQFGPEQVQECAHEVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEK 2097
HPV G V DL +K+VYVTS +L VW R R A I + K R +K +PG+I+ ++ +K+ + I+DGQHR GAL+ +SE +W +V++EVF E ++LF EINK EP+ IDL G V+E + L + MF R R P+L+ F++ L +S ++ R L + +L YL VN+ + R ++QW+ E S L A+ KAK F+LG+++
Sbjct: 95 HPVFGELVVDLGYKQVYVTSVSSLKGIGVWNLNRAYRQNRAAAIAKDKIASGWR-----SKVLPGIISCFEFVPRDEAIDKELFTEDESQSKSANQSDTKILDGQHRRGALIFMSERKIWEEENASVLLEVFKLCSETGAKQLFTEINKMEPVRLIDLPDMGSIDVKEALNYAAEKLESDYPEMFKTSSRCRIPHLNVDVFRDELFQSDILTRFHLRTGDDVLQYLKNVNKKMEARSLEQWK------EVYKGSASELEKAITKAKKFGFFLGIDR 359
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A7S0RPI8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RPI8_9CHLO) HSP 1 Score: 113 bits (283), Expect = 5.580e-23 Identity = 84/265 (31.70%), Postives = 138/265 (52.08%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARV---WEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIE-IDLNQFGPEQVQECAHEVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGME 2094
HP+LG + D +K+VY L+ ++V WE R+ R A +I +AK+ + Q+ PGVITL+ + K V+ I+DGQHR+GAL +L EEG + + V+VEVF K ++E LF EIN+A+P++ +D+ + L +F MF +R P+L+ K+ L ++ ++ R +L + LLD++L N L++R D+W + G + + L AL KA++ F+LG +
Sbjct: 191 HPLLGTLLQDFGYKQVYSLKMSQLIDSKVLPVWESQRSFREDRAKKIVKAKQTD------QRFGVFPGVITLWSDA-----NSKDAKVYKILDGQHRVGALRILMEEGEV-KPDDEVMVEVFRLKGDEEAAALFTEINQAQPVKLVDMPGVTDAATRVALEGAAASLKAKFPAMFKTSERCLPPHLNVDVLKDKLFQADVMPRFKLTTSKQLLDWMLEQNVKLAERSDDEWIELRGPKGSSKKKEETFLKALIKARDTEFYLGSD 443
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A835Z013_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z013_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.320e-21 Identity = 98/379 (25.86%), Postives = 159/379 (41.95%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQ-----------------------------------RPLLPLRSEKQPYVF--------------------------GIVDGQHRLGALLLLSEEGLWNRSERNVVVEVFDTKDEQEIEELFAEINKAEPIE-IDL-------------NQFGPEQVQECAH-------------------------------------EVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNEMLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEKAWMVV 2112
H + G V DL +K++Y+TS E L++A +W++ R LRP A + + A++++ +K MPGVITLYQ L L ++ YV IVDGQHR+ AL+++SE G W+++ NV V+V T DEQE +LF EINKAEP+ +D+ + F +H E L + + M R + P+++ F++ + +S ++ RH+L+ LL +L N+ L +R+ QW + G+ + S ALKKA+ + F+LG++KAW+ +
Sbjct: 103 HAIYGELVHDLGYKQIYLTSVERLVRAPIWQRQRILRPERA------QAMAADKMRGKKFNGMPGVITLYQDRQAEVSWECRLAHVNVDATRSAPRHKSWDTWCCNTARLRLYMSRRKYVSVWRGVRSADVDRRQQLICESSDPTDSAIVDGQHRVAALMIMSEAGAWDKAAHNVAVDVVPTSDEQEGCDLFTEINKAEPVRLVDMPGEGAVAHLLDSDSDFDSWWYVPPSHATAQVXXXXXXXXXXXXXXXXXXXXXXXXXXQRAVLAEAAAALAEAYPAMVKQSSRCKAPHINLDVFRDDIFQSELMARHKLHTTAQLLAWLQEANDTLGQRDEAQWAQALS---GRTTAASS--AALKKARAHGFYLGLDKAWLHI 470
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Match: A0A7S1V5L2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5L2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.360e-18 Identity = 84/277 (30.32%), Postives = 132/277 (47.65%), Query Frame = 1
Query: 1315 HPVLGHFVADLTHKRVYVTSAEALLKARVWEKARTLRPVHAVEIFQAKKIEAERLQIQKAKSMPGVITLYQRPLLPLRSEKQPYVFGIVDGQHRLGALLLLSEEGLWNR------SERNVVVEVF----DTKDEQEIEELFAEINKAEPIE-IDLNQFGPEQVQECAHEVVFHLYKQFRPMFG-GKRIRRPNLHAATFKEHLMRSGMIERHELYNPELLLDYLLRVNE-MLSKREMDQWELMVGQEEGQYASRRSLLVALKKAKNNRFWLGMEKAWM 2106
HP+LG VADL +KR++ A L +WEK R R A+ + + K A+ +Q+ PGVI L+ E + ++DGQHR+G + L + S NV+VEV+ D KD ++ LF EINKAEP++ +D+ V+ V L + + MF ++ R PN++ ++ L S +++RH+L L +++L NE M K D + G KKAK N+F+LG++ AW+
Sbjct: 20 HPILGPVVADLGYKRIHFVPAAQLSTIAIWEKQRIYRNDRAISMAKEK---AKAMQL----GFPGVICLH---------EDEAGKLCVIDGQHRIGMMAWLQQXXXXXXXXXXXSSFDNVLVEVYTHLQDEKDHKKA--LFLEINKAEPVKLVDMPGVAKAGVRNVITGAVDKLQEAYPKMFSPSQKCRTPNVNVDNLRDSLFASDVMKRHKLTTTTKLYNWILEQNEKMEDKYNADLIQDPTFSPPG-----------WKKAKANKFYLGLDSAWL 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.57.1 >prot_P-littoralis_Contig82.57.1 ID=prot_P-littoralis_Contig82.57.1|Name=mRNA_P-littoralis_Contig82.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=677bp MFSSKMIRRGRSSLAVLSTAKRCNAVGLGRVATAGQQRSPPGGAGGAAAAback to top mRNA from alignment at P-littoralis_Contig82:316963..323888- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.57.1 ID=mRNA_P-littoralis_Contig82.57.1|Name=mRNA_P-littoralis_Contig82.57.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6926bp|location=Sequence derived from alignment at P-littoralis_Contig82:316963..323888- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:316963..323888- >mRNA_P-littoralis_Contig82.57.1 ID=mRNA_P-littoralis_Contig82.57.1|Name=mRNA_P-littoralis_Contig82.57.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2031bp|location=Sequence derived from alignment at P-littoralis_Contig82:316963..323888- (Pylaiella littoralis U1_48)back to top |