mRNA_P-littoralis_Contig82.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A6H5K243_9PHAE (VKc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K243_9PHAE) HSP 1 Score: 586 bits (1511), Expect = 1.830e-200 Identity = 322/425 (75.76%), Postives = 353/425 (83.06%), Query Frame = 1
Query: 718 MTIRSPPCSPALLQVLALVLAAFTLIPGNHAFVATTTATCGRPSLRTQQQRCISS--MFLRPRGDGA-------GGAAATAALTWGKRRRSASVAADATRLRMGA----EDGDGDAGAPDPSYAEWPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLCGASGGCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFIKGEA--VDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETALDIRQAEASPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIVGLSPSKG 1947
MT+R+PPCSPALL+ +ALVLA T+IP + AFVAT++ GR S +TQ RC S MF R R + GG++ ++ G ATRL MGA ED DG+ Y+ WP+INRKAIGA+A VG+LESA+LTYQK+HPAGLDLLCGASGGC+DVLNGPYSNVLGVPLSAFGTLGYL+AA LAVVPLF K E+ VD+T+RSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMC +AW KRAVPEKTKAAVVGACTTLITAFACL +FVVTETALDIRQAEASPGELVG+ LVA P IDT SSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAA+IPGFPTWDIDGKLYPGEQTLEELEEIVGL+P KG
Sbjct: 1 MTMRAPPCSPALLRFVALVLATLTVIPSSLAFVATSS---GRLSFKTQP-RCGGSSVMFSRARRPSSNANRRPVGGSSVGGSVRGGT---------TATRLIMGAGNISEDADGE---ESSDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWTKRAVPEKTKAAVVGACTTLITAFACLAVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAADIPGFPTWDIDGKLYPGEQTLEELEEIVGLAPYKG 409
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: D7G9E2_ECTSI (Possible vitamin K epoxide reductase, plastid protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E2_ECTSI) HSP 1 Score: 545 bits (1405), Expect = 6.760e-186 Identity = 276/316 (87.34%), Postives = 294/316 (93.04%), Query Frame = 1
Query: 1006 EDGDGDAGAPDPSYAEWPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLCGASGGCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFIKGEA--VDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETALDIRQAEASPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIVGLSPSKG 1947
EDGDG+ Y+ WP+INRKAIGA+A VG+LESA+LTYQK+HPAGLDLLCGASGGC+DVLNGPYSNVLGVPLSAFGTLGYL+AA LAVVPLF K E+ VD+T+RSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMC +AWMKRAVPEKTKAAVVGACTTLITAFACLT+FVVTETALDIRQAEASPGELVG+ LVA P IDT SSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGK+ MSKVKYIECSNRGVDNQVDMCKAA+IPGFPTWDIDGKLYPGEQTLEELEEIVGL+P G
Sbjct: 8 EDGDGE---ESSDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCVVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKQVMSKVKYIECSNRGVDNQVDMCKAADIPGFPTWDIDGKLYPGEQTLEELEEIVGLAPYTG 320
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A0G4EVC6_VITBC (VKc domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EVC6_VITBC) HSP 1 Score: 231 bits (589), Expect = 1.540e-63 Identity = 126/326 (38.65%), Postives = 197/326 (60.43%), Query Frame = 1
Query: 1039 PSYAEWPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLCGASGGCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFIKGEAVDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETA-------------LDIRQAEASPGELVGLNL---------VAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSK-VKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIVGLSPSKG 1947
PS + WP+INRK + + GVG +E+AFLTY KL A + +C +GGC VL GPYS V G+PL+A L Y L+++PL + ++ +R +LL +TTAM FS+YL+S+L F++ CP+C SAGLSL++ ++W+ VP+ ++ ++ T ++ A L ++ V E + +E G G L P I T SS ++LR+ KKL+++ A+MYGAYWC HC++QK+ GKEA ++Y+EC+ G++++ D C ++PG+PTW+I+G+LYPGE++L LE+I G++P G
Sbjct: 83 PSPSPWPAINRKLMAFVGGVGLVETAFLTYTKLF-ASVASIC-PTGGCYTVLGGPYSTVFGIPLTAPAMLAYGLVTYLSLLPL--SKPSAEQWTRPMLLALTTAMATFSVYLMSVLVFQLQEFCPYCYLSAGLSLTLFLMSWLWSIVPDGLQSRIIRYATAVVMAVMSLGVYSVQEPGNLAAVVAFVRNPVASLAGSEGEEGYEAGWFLDRLFESEGPFVPPEITTASSARSLRLAKKLQTMGARMYGAYWCPHCYDQKQTFGKEAFEGYIEYVECAREGLNSERDRCDKRDVPGYPTWEINGELYPGEKSLATLEKIAGIAPPDG 404
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: W7TFV8_9STRA (Vitamin K epoxide reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFV8_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.350e-62 Identity = 128/308 (41.56%), Postives = 181/308 (58.77%), Query Frame = 1
Query: 1036 DPSYAEWPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLC----GASGGCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFIKGEA------VDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETALDIR-QAEASPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIV 1926
D S WP NR+ +G + G+G LE+A+LTYQKL L LC G S C DVLN Y++ LGVPL+ G + Y + LA+ P+ E D SR+ LL VTT M FS YL+ +L ++ CP+CL SA LS SM AL W+K+ P TK+ V A ++T L F + + Q GE+ G P I T S+ ++ + +L+ LDA+MYGA+WC+HC+ QK+ LG+EA ++ YIEC+ G ++ +CKA IPG+PTW+I G+LYPGE++L++LE+IV
Sbjct: 88 DLSVGVWPRENRQLLGLLGGLGFLETAYLTYQKLTTDDLTSLCTSVAGLSMRCGDVLNSEYASFLGVPLTLPGAVAYGTVTALALWPILAGNEGSRERAEADLNSRAPLLTVTTGMATFSAYLMWVLATQVRELCPYCLASASLSFSMAALTWVKQVEPNATKSLVYKAGAVVVTGLFSLGAFAYASARIMVMSQGPGEGGEVGGSR---PPPITTHSTARSEALALRLQDLDARMYGAFWCSHCYEQKQSLGQEAYRRIAYIECAPDGFASESKICKARKIPGYPTWEIKGELYPGEKSLDQLEDIV 392
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A1Z5JS18_FISSO (VKc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS18_FISSO) HSP 1 Score: 224 bits (571), Expect = 2.410e-62 Identity = 126/301 (41.86%), Postives = 189/301 (62.79%), Query Frame = 1
Query: 1054 WPSINRKAIGAMAGVGSLESAFLTYQKL-HPAGLDLLCGASGG-CMDVLNGPYSNVLG--VPLSAFGTLGYLSAALLAVVPLFIKGEAVDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETA-LDIRQAEASPGELVG--LNLVAA---PAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIV 1926
W R+ +G +A G+LE++FLTY KL + + LC +GG C VLNGPY+ + G +PL+A G + Y++ A LA+ P D +R LL V T+MGVFS++L++LL + C +C+ SA S+SM L W+ +PE+ A G ++ + F +V T+ + A G+LVG +LVA P I T SS +A+ + KK++++D + YGA+WC+HCF+QK+ +GKEAM+ + YIECS G++ Q +CK ++PG+PTW+I+GKLYPGE+TL+ELEEIV
Sbjct: 44 WNPRLRRIVGGIAVAGTLETSFLTYSKLAESSAAEQLCSITGGSCSSVLNGPYAVIPGSEIPLAAVGVVAYVTVAALALGPTLANSPKDDTDNRILLTAVATSMGVFSVFLMTLLFGVLKESCAFCVASAIFSISMAKLLWLGGCLPEEN--AKTGVSASISSGFVAFMAAIVLFTSNIPPTSAVNFAGQLVGSSTSLVAGESPPTITTTSSTKAMVLAKKMQTMDTRFYGAFWCSHCFDQKQAMGKEAMAMIPYIECSRDGLNAQTKLCKEKDVPGYPTWEINGKLYPGEKTLDELEEIV 342
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A7S2RXM7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXM7_9STRA) HSP 1 Score: 217 bits (553), Expect = 2.080e-59 Identity = 129/303 (42.57%), Postives = 179/303 (59.08%), Query Frame = 1
Query: 1024 AGAPDPSYAEWPSINRKAIGAMAGVGSLESAFLTYQK--LHPAGLDLLCGASGGCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFI-KGEAVDR-TSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETALDIRQAEASPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEE 1920
AGA S A +RK IG +AG+G LE+ ++ K L +G L G S C +VLNGP+S+V GVPL+ G Y +AALLA+ PL + +G R ++ L+ VT+AM FS YL+ +L K+G CPWC SA LS + W + V + + +V A T + + A +FVVT T + + +A E L P I SS +AL + K L++ AKMYGAYWC+HCF+QK+ LG EAM ++ Y+EC+ GV++Q +C+ IPG+PTW I GK +PGE TL ELEE
Sbjct: 80 AGAASGSPAGLTDDDRKIIGTLAGLGVLETGYINAFKAGLLGSGAPLCAGMS--CSEVLNGPWSSVFGVPLTVPGMAAYATAALLALAPLVVSRGNMPTRIATQKGLIAVTSAMATFSTYLMLVLFLKLGSWCPWCFFSACLSTLLATFTWFRTGVKDSWRVGLVSAGATAVLSAA---LFVVTSTDVALAEARGYLDERAQDILYTPPPITRHSSERALSVAKALEAKGAKMYGAYWCSHCFDQKQSLGMEAMGRIPYVECAKDGVNSQTKLCRENKIPGYPTWVIGGKQHPGEMTLSELEE 377
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A7S2K3D4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3D4_9STRA) HSP 1 Score: 216 bits (549), Expect = 9.830e-59 Identity = 125/323 (38.70%), Postives = 182/323 (56.35%), Query Frame = 1
Query: 1036 DPSYAEWPSINRKAIGAMAGVGSLESAFLTYQKL--HPAGLDLLCGASG----GCMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLFIKGE--------AVDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTK-AAVVGACTTLITAFACLTIFVVTETALDIRQAEA-----------SPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIV 1926
D + W RK + A+A +G+ E+AFLT K ++ +C SG GC DVL+ PY+N+ G+PL+AFG Y + A+L+++PL K E D +R LL ++T M FS +L+SLL + CP+C+ SA LSL + + W A +TK AA+ G + +IT + E D + + +P EL + PAI SS +A+ + K L +LDAK +GA+WC+HC+ QK+ LGK+AM+K+ YIEC G ++Q CK IPG+PTW+I G L+PGEQTL+ELE+IV
Sbjct: 65 DANGTVWNPSARKTLAALATIGAAETAFLTGVKTLGGEGAINSICSVSGNALGGCSDVLSSPYANIAGIPLTAFGFAAYTTVAILSILPLLNKEENDSSSTAGGDDSFNRLALLTISTGMATFSAFLMSLLLLVLKEMCPYCILSAVLSLGLGTVTWFGGAASNQTKRAAIAGLSSVMITTLTMFGLVFTAEANYDASSSSSGSTTALLAQGETPPELTNQS---PPAITQDSSDRAMILAKDLNALDAKFFGAFWCSHCYEQKQTLGKQAMAKIPYIECDKDGKNSQRGFCKEKKIPGYPTWEIAGTLHPGEQTLDELEQIV 384
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A7S0J935_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J935_9EUKA) HSP 1 Score: 210 bits (535), Expect = 6.400e-58 Identity = 128/299 (42.81%), Postives = 176/299 (58.86%), Query Frame = 1
Query: 1069 RKAIGAMAGVGSLESAFLTYQKLHPAG--LDLLCGASGG-CMDVLNGPYSNVLGVPLSAFGTLGYLSAALLAVVPLF----------IKGEAVDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKTKAAVVGACTTLITAFACLTIFVVTETALDIRQAEASPGELVGLNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIV 1926
R A+G +AG G +E+A +TY KL G ++ LC GG C DVLNGP+S VLG+PLSA G LGY +AALLA PLF G A D S LL+ ++ M FS L++LL + SA S +MCA+AW +P +T+A+VV A L+T +FV+ L++ QA+ P AP I VSS +A I +L + D +M+GAYWC+HC NQKE LG EA K++Y+EC G D+Q +C+A + G+PTW +DG L+PGE+TL+ELE ++
Sbjct: 6 RAAVGGLAGAGVVETALITYDKLWGDGSAVESLCAVGGGGCADVLNGPWSTVLGLPLSALGLLGYSAAALLAAAPLFDGSAAGGRARAGGAAEDTFSAEALLLCSSVMATFSACLMALLV-ALRSXXXXXXASALTSAAMCAVAWRAPLLPSRTEASVVVASGALVTVAVAGGLFVLKTRELEL-QADELPRR--------APPIIAVSSARATAIAARLAAHDGRMFGAYWCSHCLNQKETLGAEAFRKLQYVECDEDGDDSQRLLCRAEGVRGYPTWQLDGLLFPGERTLDELEALL 294
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A7S4VPD6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPD6_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.010e-56 Identity = 134/336 (39.88%), Postives = 192/336 (57.14%), Query Frame = 1
Query: 1054 WPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLCGASGGCMDVLNGPYSNV-----LGVPLSAFGTLGYLSAALLAVVPLFI-----KGEAVDRTSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVPEKT---------KAAVVGACTTL----ITAFACLTIFV-VTETALDIRQAEASPGELVGLNLVAA--------------PAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSK-VKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIVGLSPSK 1944
W RK +G ++ +G+LE+ FLTY KL DL CG +GGC VLN PY+ + L VPL+A G L Y + A+L++ P+ +G + +R LL +TT+M FS++ +S + + C +CL+SA LS+++ L+W +P + K V+G T+L +T L +F V ETAL + S G G L+A+ P I T SSP+AL + L+ L+AKMYGAYWC+HC+ QK+ G EAM + V Y+EC G+++Q +CKA +IPG+PTW+IDGKLYPGEQ L+ELE+IV SK
Sbjct: 78 WNPSLRKTMGTLSTLGALETGFLTYVKLFSDSADL-CGTNGGCGSVLNSPYATIHLGEGLDVPLAALGFLAYSTVAVLSLTPVLASSSSQEGNDGEDWNRIGLLALTTSMATFSVFCMSFIYGVLHTSCTYCLSSAILSITLGILSWTGGVLPATSVDNNESNDPKMRVLGLQTSLGGFALTTIMALVLFTGVDETALASYGGDGS-GNTFGSTLLASTSSTNTKELVLKIPPPITTTSSPRALSLATDLQKLNAKMYGAYWCSHCYEQKQKFGLEAMRQYVPYVECDREGINSQGKLCKAMDIPGYPTWEIDGKLYPGEQELDELEDIVKEIMSK 411
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Match: A0A7S3P7K1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7K1_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.720e-54 Identity = 127/314 (40.45%), Postives = 180/314 (57.32%), Query Frame = 1
Query: 1054 WPSINRKAIGAMAGVGSLESAFLTYQKLHPAGLDLLCGASGGCMDVLNGPYSNV--LGVPLSAFGTLGYLSAALLAVVPLFIKGEAVDR---TSRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCALAWMKRAVP-EKTKAAV---VGACTTLITAFACLTIFVVTETALDIRQAEASPGELVG--------------LNLVAAPAIDTVSSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKAANIPGFPTWDIDGKLYPGEQTLEELEEIV 1926
W RK +G +A +G +E+++LT+ K+ AG + CGA C VL+GPY+ V LG+P++ G Y A LA+ PL + G D+ +R L ++T MGVFS++L++LL + CP+C+ SA LS+S+ L+W+ P E+ K + VG + L V + + A G L G I T SSP+AL I +L +L+AKMYGAYWC+HCF+QKE LGKEAM ++ YIECS G ++QV +CK IPG+PTW+I+GKL+PGEQ L+EL EIV
Sbjct: 98 WNPRLRKTLGIIASLGIIETSYLTWTKVA-AGGETFCGAD--CASVLSGPYATVPGLGIPVATLGLAAYTCVASLALGPL-VFGTTADKEEENNRLALTALSTTMGVFSVFLMTLLFGVLKESCPFCVFSAVLSISLAKLSWLGGVPPPERLKDGIKYSVGGGLAAVLGILVLYAGVPEDATSQVNFA----GTLAGGRDSXXXXXXXXXXXXXXXXXXISTSSSPRALEISNELATLNAKMYGAYWCSHCFDQKEQLGKEAMQRIPYIECSREGTNSQVSLCKEKQIPGYPTWEINGKLFPGEQALDELFEIV 403 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.31.1 >prot_P-littoralis_Contig82.31.1 ID=prot_P-littoralis_Contig82.31.1|Name=mRNA_P-littoralis_Contig82.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=442bp MKRALATAAPAAAAAAAALPPSSRQRRRPVSMTIRSPPCSPALLQVLALVback to top mRNA from alignment at P-littoralis_Contig82:171917..180272+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.31.1 ID=mRNA_P-littoralis_Contig82.31.1|Name=mRNA_P-littoralis_Contig82.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8356bp|location=Sequence derived from alignment at P-littoralis_Contig82:171917..180272+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:171917..180272+ >mRNA_P-littoralis_Contig82.31.1 ID=mRNA_P-littoralis_Contig82.31.1|Name=mRNA_P-littoralis_Contig82.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1326bp|location=Sequence derived from alignment at P-littoralis_Contig82:171917..180272+ (Pylaiella littoralis U1_48)back to top |