prot_P-littoralis_Contig12.108.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig12.108.1
Unique Name	prot_P-littoralis_Contig12.108.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	290

Homology

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BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Match: D7G670_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G670_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 3.540e-92
Identity = 177/304 (58.22%), Postives = 199/304 (65.46%), Query Frame = 0

Query:    1 MALESSVLGCGSDDWSVDSDYAFQGFADDIKQHQDKQ-RGEPFPQPL----APTLDRSDAPNSLKPSSADAVASPENNLNTGSTSLLHGPPTKAREAEATGQMATVAEGEGVASGRMLVLEYGEM--AREDTKDERLGGGNPPNPLMCNTRLFVDPGSSTDSAHILRLEQRMFLKAAFQLLEERDRLFPASIGSWSNGGAG------VPMGGGGSNLRDHRGVFVNGSAITAGKTGEGVRFQFQ-HESGNTMNRPRLLMSGTLRKATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGKR 290
            +ALESSVLGCGSDDWSVDSDYAFQ FADD+K HQ +Q R E   Q L    +PT +RS  PN   P +   V S ++N     T+ LH  P  A  A A     T    +          E GE+  +R  +  E  G  N  +P++ NTRLF DPGSS+DS HILRLEQRMFLKAAFQLLEERDRLFPASIGSW   G G             SNLRD RG +VNG A++AGK GEG RF FQ HE     NRPR+L SGTLRKATARSVGRL KTTWKTKYVELTPGSFAYSDNGP V+GKR
Sbjct:    2 IALESSVLGCGSDDWSVDSDYAFQDFADDVKHHQQQQARHEKSEQNLLQSSSPTRERSAVPNPGTPINKRVVGSLDDNSRA-ETTELHEHPEAAEGARA--DTLTAGGAQAXXXXXXXXPEEGEVGGSRRGSASE-AGKDNRHHPVLSNTRLFGDPGSSSDSTHILRLEQRMFLKAAFQLLEERDRLFPASIGSWGTAGGGWVXXXXXXXXXXXSNLRDRRGGYVNGGAVSAGKAGEGARFHFQQHEPNFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGKR 301

[Close]

BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Match: A0A6H5KYB1_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB1_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 6.620e-50
Identity = 96/132 (72.73%), Postives = 102/132 (77.27%), Query Frame = 0

Query:  165 MFLKAAFQLLEERDRLFPASIGSWSNGGAG-VPMGGGG-----SNLRDHRGVFVNGSAITAGKTGEGVRFQFQ-HESGNTMNRPRLLMSGTLRKATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGK 289
            MFLKAAFQLLEERDRLFPASIGSW     G VP          SNLRD RG +VNG+A++AGK GEG RF FQ HE     NRPR+L SGTLRKATARSVGRL KTTWKTKYVELTPGSFAYSDNGP V+GK
Sbjct:    1 MFLKAAFQLLEERDRLFPASIGSWGTAAGGWVPXXXXXXXXXXSNLRDQRGGYVNGAAVSAGKAGEGPRFHFQQHEPTFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGK 132

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G670_ECTSI	3.540e-92	58.22	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KYB1_9PHAE	6.620e-50	72.73	PH domain-containing protein n=1 Tax=Ectocarpus sp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig12	contig	P-littoralis_Contig12:483973..485297 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig12.108.1	mRNA_P-littoralis_Contig12.108.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig12 483970..485297 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig12.108.1 ID=prot_P-littoralis_Contig12.108.1|Name=mRNA_P-littoralis_Contig12.108.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MALESSVLGCGSDDWSVDSDYAFQGFADDIKQHQDKQRGEPFPQPLAPTL
DRSDAPNSLKPSSADAVASPENNLNTGSTSLLHGPPTKAREAEATGQMAT
VAEGEGVASGRMLVLEYGEMAREDTKDERLGGGNPPNPLMCNTRLFVDPG
SSTDSAHILRLEQRMFLKAAFQLLEERDRLFPASIGSWSNGGAGVPMGGG
GSNLRDHRGVFVNGSAITAGKTGEGVRFQFQHESGNTMNRPRLLMSGTLR
KATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGKR