mRNA_P-littoralis_Contig814.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig814.7.1
Unique NamemRNA_P-littoralis_Contig814.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: D7FLR4_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR4_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 3.370e-33
Identity = 57/74 (77.03%), Postives = 69/74 (93.24%), Query Frame = 1
Query:   19 GSVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            GSV+T++PNVFFFLIDDMG+GD+GYQSTDLS++TPN+DALAAGG+KLSNYY+  +CTP R S+MTGRYPVR GM
Sbjct:  210 GSVSTSKPNVFFFLIDDMGFGDMGYQSTDLSEITPNLDALAAGGVKLSNYYTMTLCTPARASIMTGRYPVRYGM 283          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A6H5K4V1_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4V1_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 8.120e-30
Identity = 54/74 (72.97%), Postives = 67/74 (90.54%), Query Frame = 1
Query:   19 GSVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            GSV+T++PNVFFFL+DDMG+GD+GYQSTDLS++TPN+DALAAGG  LSNYY+  +CTP R S+MTGRYPVR G+
Sbjct:  182 GSVSTSKPNVFFFLVDDMGFGDMGYQSTDLSEITPNLDALAAGG--LSNYYTMTLCTPARASIMTGRYPVRYGL 253          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A6H5JIE9_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.950e-26
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1
Query:    7 GDTNGSVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            G+ N    T +PNVFF ++DDMG+ DIGYQS DL  +TP++D LAAGG+K++NYY+ PICTP R SLMTGRY  R G+
Sbjct:  141 GEPNPQAETAKPNVFFIMVDDMGWNDIGYQSVDLQGVTPHLDRLAAGGVKMTNYYTLPICTPARASLMTGRYVFRYGL 218          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: D7G1A6_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A6_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.080e-24
Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 1
Query:   22 SVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            S     PNVFF +IDDMG+ DIGY STDL+++TPN+D L+A G+K+S YYS  ICTP R +LMTGRYPVR G+
Sbjct:  106 SSTADNPNVFFIMIDDMGWNDIGYHSTDLANVTPNLDRLSASGVKVSQYYSMSICTPARAALMTGRYPVRYGL 178          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A6H5L6W1_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6W1_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.150e-24
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query:   16 NGSVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            N +V   RPNVFF +IDDMG+ DIGYQS DL  +TP +D LAAGG+K++NYY+   CTP R SLMTGRY VR GM
Sbjct:   52 NTAVAEARPNVFFIMIDDMGWDDIGYQSVDLKRVTPVLDKLAAGGVKMTNYYTMNTCTPARASLMTGRYTVRYGM 126          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A6H5JFF9_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF9_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 4.670e-23
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1
Query:   37 RPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLG 237
            +PNVFF +IDDMG+ D+GYQSTD+  +TPN++ LA  G+KLS YYS  ICTP R +LMTGRYPVR G
Sbjct:   96 KPNVFFIIIDDMGWNDMGYQSTDMHAVTPNLNRLAESGVKLSQYYSMSICTPARAALMTGRYPVRYG 162          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A7S2DHD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHD1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.030e-22
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 1
Query:   43 NVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            ++FFFLIDDMGY DIGYQS DL   TP MD LA+ G+ L++YY+ P CTP R +LMTG+YP  +GM
Sbjct:  135 SIFFFLIDDMGYNDIGYQSVDLPHATPTMDRLASSGVTLTSYYTIPSCTPTRAALMTGKYPHNIGM 200          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A7T6Z8_NEMVE (Predicted protein n=4 Tax=Nematostella vectensis TaxID=45351 RepID=A7T6Z8_NEMVE)

HSP 1 Score: 91.7 bits (226), Expect = 8.630e-21
Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 1
Query:   31 TTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            T  P++ F L+DD+G+ D+GY +   +  TPN+D LA+ G+KL +YYSQP+CTP RG+LMTG+YP+ LGM
Sbjct:   22 TKPPHILFILMDDLGWSDVGYHNISHAVKTPNIDKLASQGVKLMSYYSQPMCTPSRGALMTGKYPIHLGM 91          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A7S2D7A6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7A6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.950e-20
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query:   43 NVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLGM 240
            ++ F L DD G+ D+GY S DL  LTP +D+LA  GIKL  YY Q +CTP RG+LMTG+YP+ +G+
Sbjct:   65 HIVFVLADDQGFNDVGYSSNDLEGLTPTLDSLAGQGIKLMQYYGQQLCTPARGALMTGKYPIHIGL 130          
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Match: A0A7S1WNY3_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WNY3_ALECA)

HSP 1 Score: 86.3 bits (212), Expect = 8.760e-20
Identity = 36/66 (54.55%), Postives = 52/66 (78.79%), Query Frame = 1
Query:   40 PNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGGIKLSNYYSQPICTPGRGSLMTGRYPVRLG 237
            PN+ FFL DD+GY ++G+ ++    +TP++DA+A+ GI L NYY QPIC+P R +L+TGRYP+RLG
Sbjct:   39 PNIVFFLADDLGYNEMGFMNSSRGLITPHLDAMASEGIVLRNYYVQPICSPTRSALVTGRYPLRLG 104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig814.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLR4_ECTSI3.370e-3377.03Formylglycine-dependent sulfatase n=1 Tax=Ectocarp... [more]
A0A6H5K4V1_9PHAE8.120e-3072.97Sulfatase domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JIE9_9PHAE4.950e-2660.26Sulfatase domain-containing protein n=2 Tax=Ectoca... [more]
D7G1A6_ECTSI2.080e-2463.01Formylglycine-dependent sulfatase n=1 Tax=Ectocarp... [more]
A0A6H5L6W1_9PHAE5.150e-2464.00Sulfatase domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JFF9_9PHAE4.670e-2365.67Sulfatase domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2DHD1_9STRA7.030e-2262.12Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A7T6Z8_NEMVE8.630e-2154.29Predicted protein n=4 Tax=Nematostella vectensis T... [more]
A0A7S2D7A6_9STRA2.950e-2054.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1WNY3_ALECA8.760e-2054.55Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig814contigP-littoralis_Contig814:108942..110055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FLR4
PFAMsSulfatase
Model size240
Max annot lvl2759|Eukaryota
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.52e-34
EggNOG OGsCOG3119@1|root,KOG3867@2759|Eukaryota
EC3.4.14.10
Descriptionsulfuric ester hydrolase activity
Cds size240
COG categoryP
BRITEko00000,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791668.2549772-CDS-P-littoralis_Contig814:108941..1090971680791668.2549772-CDS-P-littoralis_Contig814:108941..109097Pylaiella littoralis U1_48CDSP-littoralis_Contig814 108942..109097 +
1680791668.2684636-CDS-P-littoralis_Contig814:109971..1100551680791668.2684636-CDS-P-littoralis_Contig814:109971..110055Pylaiella littoralis U1_48CDSP-littoralis_Contig814 109972..110055 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig814.7.1prot_P-littoralis_Contig814.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig814 108942..110055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig814.7.1

>prot_P-littoralis_Contig814.7.1 ID=prot_P-littoralis_Contig814.7.1|Name=mRNA_P-littoralis_Contig814.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=80bp
ARGDTNGSVNTTRPNVFFFLIDDMGYGDIGYQSTDLSDLTPNMDALAAGG
IKLSNYYSQPICTPGRGSLMTGRYPVRLGM
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mRNA from alignment at P-littoralis_Contig814:108942..110055+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig814.7.1 ID=mRNA_P-littoralis_Contig814.7.1|Name=mRNA_P-littoralis_Contig814.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1114bp|location=Sequence derived from alignment at P-littoralis_Contig814:108942..110055+ (Pylaiella littoralis U1_48)
GCGAGAGGTGATACCAACGGTTCCGTCAATACCACCAGGCCGAACGTCTT CTTCTTTTTGATCGATGACATGGGCTACGGGGACATTGGATACCAATCCA CGGACCTGTCAGACCTCACCCCGAACATGGACGCGCTCGCGGCCGGTGGC ATTAAGGTACACTGTAAGAATTGTATGTTCCCATCAGCAATCTCGCAAAT TGGTTGTAAATCATAGTGTAGTCCCCGGGTAGGGGTACGTAACAGTAGTT CGATCGATGCGCTCTCGCTCCCGTCGGCGTTGATGACGTGGTTCGGCCCG AATTTCTTTGTTCACTCGAAAGGAAGAAGGGCTGATTGTATTGTTGGAGA CTCCCAACTGCTGTACGTGTTGTTTTCGCCCGCGACTCTCTCTCTAACTT GATATTAAGCTATTACGCTGTAATAATTGTGTGGTTACGCTCTCTATTTC TCAATTTTCATTCTGTTTCATCTTCTTCGTGTTTTCCTTTTACTTTGTTT TGCTCGCTACAAAAATTGGAATATGCTGTGCTTCAAATCGTCCATTTTTT TCCTGACAGGCGCACGCACACACAGCGGCTACCCGTCCACAACGACCTTG TGTTTACCTTGTGCTCTATTGTCAGATACCATTCCCGATCGATTGGTTGC CTGTTGGAGGCTAACGTCTAAGTATTTTGGTAGCGGAGCGACGCGAACTC GGCTCCTCAGCAGGGGCAATACCATCACCTCCCGAGCGGGACATGCAGCG TACCGAGTGCAGCATTGGCCGCCGGTCTCTGAATTATCCTTCGCTTTGGT CGTAGATCGCGGAAAAAGCAGATGTACGACGAAAAATGGTCAAAACCTCG ACACTCCCTGAGAACATGTGGACGCGTATAATGCAGCGGGTATTGTCAGT CTCGGCCTTTAAAGCGATTTCTTTCACCTATCCTCGATAACCCTCTTGCC CATTTTCCATCATCTCTGGCCACGAAACAAGCTATATTTCAATGTTTTTC GGATTCCCTTTCTTTGCCGTGAATCTGCAGCTTTCCAACTACTACTCCCA GCCAATCTGCACCCCGGGGAGAGGTAGCTTGATGACAGGCCGGTACCCCG TCAGGCTCGGGATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig814:108942..110055+

>mRNA_P-littoralis_Contig814.7.1 ID=mRNA_P-littoralis_Contig814.7.1|Name=mRNA_P-littoralis_Contig814.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=240bp|location=Sequence derived from alignment at P-littoralis_Contig814:108942..110055+ (Pylaiella littoralis U1_48)
GCGAGAGGTGATACCAACGGTTCCGTCAATACCACCAGGCCGAACGTCTT
CTTCTTTTTGATCGATGACATGGGCTACGGGGACATTGGATACCAATCCA
CGGACCTGTCAGACCTCACCCCGAACATGGACGCGCTCGCGGCCGGTGGC
ATTAAGCTTTCCAACTACTACTCCCAGCCAATCTGCACCCCGGGGAGAGG
TAGCTTGATGACAGGCCGGTACCCCGTCAGGCTCGGGATG
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