prot_P-littoralis_Contig813.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig813.6.1
Unique Name	prot_P-littoralis_Contig813.6.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	278

Homology

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BLAST of mRNA_P-littoralis_Contig813.6.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.660e-7
Identity = 77/271 (28.41%), Postives = 110/271 (40.59%), Query Frame = 0

Query:   11 RPCRTKALPAKLQGAGEPGAAAGHGQAQLRQPAAAALAATGGRRTAGGQRAASTQREPVRLAKAPVRAGSPRAHVTTSSPPSSLGTSLQQRSPVSCGSVGVEIDVENDTALTAXXXXXXXXXXXXXXXXXXXXXXDGSNEVDADGGGVFSDEALEALLTACEGNGSKSPRSGRESGESSVVDARSNLARSDVVDSSDDSSPTNVNGKGKGKARTESVGGRRNPHQ---ASAEKAKGKGYQLWALGFLQRACSYRDIPRMSQQKSKEAIAEA 278
            RP RTK +P +LQG GE GAAAGHG AQ+  PA A                       V+L  AP  +G  R  V +   P    T  QQ  P   G +   +D E   A                         D S+    D  G  +  +  +   + E + + S    +E G+    D+       + +     +     +GK K  A   +VG R +      ASA+KA+GK Y LWA   L+R C++R IPRMS++  K  + +A
Sbjct:   11 RPSRTKTVPLRLQGGGESGAAAGHGVAQI-TPAGA-----------------------VQLQPAP--SGMVRQAVHSRVTPH---TDTQQGVPPGAGLMPGLMDTEGTKARRVAVSMILNDKQFGEASGKNWSESDSSD----DDNGKDAPMSSGSSNVSVEESSAPSDIISQEPGDVESGDSVFAKEIREAIFGGGGAGRKKTHGKRKASAGGSAVGNRNSTKASLGASAKKARGKDYPLWAAHLLRRTCAHRKIPRMSKEGDKHVLVQA 248

[Close]

BLAST of mRNA_P-littoralis_Contig813.6.1 vs. uniprot
Match: A0A6H5K825_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K825_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.100e-6
Identity = 76/271 (28.04%), Postives = 108/271 (39.85%), Query Frame = 0

Query:   11 RPCRTKALPAKLQGAGEPGAAAGHGQAQLRQPAAAALAATGGRRTAGGQRAASTQREPVRLAKAPVRAGSPRAHVTTSSPPSSLGTSLQQRSPVSCGSVGVEIDVENDTALTAXXXXXXXXXXXXXXXXXXXXXXDGSNEVDADGGGVFSDEALEALLTACEGNGSKSPRSGRESGESSVVDARSNLARSDVVDSSDDSSPTNVNGKGKGKARTESVGGRRNPHQ---ASAEKAKGKGYQLWALGFLQRACSYRDIPRMSQQKSKEAIAEA 278
            RP RTK +P +LQG GE GAAAGHG AQ+  PA A                       V+L  AP  +G  R  V +   P    T  QQ  P   G +   +D E   A                         D S+    D  G  +  +  +   + E +   S    +E G+    D+       + +     +     + K K  A   +VG R +      ASA+KA+GK Y LWA   L+R C++R IPRMS++  K  + +A
Sbjct:   11 RPSRTKTVPLRLQGGGESGAAAGHGVAQI-TPAGA-----------------------VQLQPAP--SGMVRQAVHSRVTPH---TDTQQGVPPGAGLMPGLMDTEGTKARRVAVSMILNDKQFGEASGKNWSESDSSD----DDNGKDAPMSSGSSNVSVEESSVPSDIGSQEPGDVESGDSVFAKEIREAIFGGGGAGRKKTHRKRKASAGGSAVGNRNSTKASLGASAKKARGKDYPLWAAHLLRRTCAHRKIPRMSKEGDKHVLVQA 248

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig813.6.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig813.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KKV3_9PHAE	4.660e-7	28.41	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K825_9PHAE	3.100e-6	28.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig813	contig	P-littoralis_Contig813:55681..56514 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig813.6.1	mRNA_P-littoralis_Contig813.6.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig813 55681..56612 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig813.6.1 ID=prot_P-littoralis_Contig813.6.1|Name=mRNA_P-littoralis_Contig813.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp
MDEDNSLRTSRPCRTKALPAKLQGAGEPGAAAGHGQAQLRQPAAAALAAT
GGRRTAGGQRAASTQREPVRLAKAPVRAGSPRAHVTTSSPPSSLGTSLQQ
RSPVSCGSVGVEIDVENDTALTATGTGGQARVLETEAGAGTDSSSDGSNE
VDADGGGVFSDEALEALLTACEGNGSKSPRSGRESGESSVVDARSNLARS
DVVDSSDDSSPTNVNGKGKGKARTESVGGRRNPHQASAEKAKGKGYQLWA
LGFLQRACSYRDIPRMSQQKSKEAIAEA