prot_P-littoralis_Contig810.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig810.4.1
Unique Nameprot_P-littoralis_Contig810.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length280
Homology
BLAST of mRNA_P-littoralis_Contig810.4.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.400e-74
Identity = 134/155 (86.45%), Postives = 138/155 (89.03%), Query Frame = 0
Query:   10 PPRDPEELDEMVKSVQAVLGGAGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEGRLPPQVASLNRGLRRAWKGKKGELDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDXXXXXXX----REVGVGGRGG-GADLETVRRVNQLVRQ 159
            PPRDPEEL+EMVKSVQAVLGG GEPGGLGEGFVEACLSVLGWSPQGVIEAVLE RLPPQVA+LNRGLRRAWKGKKG+LDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDD           REV VGG GG G+D ETVRRVNQLVRQ
Sbjct:  336 PPRDPEELEEMVKSVQAVLGGTGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDYDDQAWREYDDREVDVGGGGGRGSDFETVRRVNQLVRQ 490          
BLAST of mRNA_P-littoralis_Contig810.4.1 vs. uniprot
Match: A0A4D9DC10_9STRA (CUE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC10_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.690e-9
Identity = 54/154 (35.06%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   12 RDPEELDEMVKSVQAVLGGAGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEGR-LPPQVASLNRGLRRAWKG----KKGELDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDXXXXXXXREVGVGGRGGGADLETVRRVNQLVRQE 160
            R    ++ MV+ V+ V  G      LGEGFV ACL+V+G++   V+ A+LEG  LP  + +L+R L          KKG  +     D++  A +   L  MEK  E+DAYLL  EYDDD        +          D E +R+ N L+R+E
Sbjct:  415 RPARSVEAMVQEVRQVCPG------LGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGREEAEEARDEEFIARQKAYLRQMEKDAEEDAYLLQ-EYDDDFDDQYAGEQTMFSRDTTREDFEAIRKYNNLMRKE 561          
BLAST of mRNA_P-littoralis_Contig810.4.1 vs. uniprot
Match: A0A7S2AVJ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVJ1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.550e-7
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 0
Query:   36 GLGEGFVEACLSVLGWSPQGVIEAVLEGRLPPQVASLNRGLRRAWKGKKG--ELDKAYRV-----DKDLAAAEAKRLIA-MEKRQEDDAYLLSREYDDD 126
            GLG GFVEA L    +S   V+ AVL+  LPPQ+  ++R L R    +K   ++D  Y V     D D+   + ++LI  M++ +ED+A++LSREYDDD
Sbjct:    1 GLGAGFVEAMLVFHDFSVARVVAAVLDDNLPPQLEGMDRKLGRYRVSRKDLKDIDAGYSVGSQARDDDVLREKQRQLIRNMDRDEEDNAWVLSREYDDD 99          
BLAST of mRNA_P-littoralis_Contig810.4.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.480e-5
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0
Query:   13 DPEELDEMVKSVQAVLGGAGEPGGLGEGFVEACLSVLGWSPQ 54
            D + L  M+  VQ V GG  + GG+GEGFVEACLS++GWSPQ
Sbjct:  730 DADTLAAMIAEVQEVFGGPEQEGGVGEGFVEACLSLMGWSPQ 771          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig810.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6J2_9PHAE1.400e-7486.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DC10_9STRA7.690e-935.06CUE domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2AVJ1_9STRA2.550e-741.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CBT6_9STRA2.480e-559.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 16..65
e-value: 3.1E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..280
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 36..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig810contigP-littoralis_Contig810:18165..21680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig810.4.1mRNA_P-littoralis_Contig810.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig810 18165..21680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig810.4.1 ID=prot_P-littoralis_Contig810.4.1|Name=mRNA_P-littoralis_Contig810.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=280bp
GDAGGGGGNPPRDPEELDEMVKSVQAVLGGAGEPGGLGEGFVEACLSVLG
WSPQGVIEAVLEGRLPPQVASLNRGLRRAWKGKKGELDKAYRVDKDLAAA
EAKRLIAMEKRQEDDAYLLSREYDDDYDDQYDDREVGVGGRGGGADLETV
RRVNQLVRQEEEEDAWWENNKNNNLSVAAPKGGGWRARAHRDAEEEDAQG
GGEDGASSATAGGRGGGGRGAGGGGRGRSGGRENSRGRGGGGGGGGGRTG
GKERGRGGGRGGRGSRGGQGDGGGGRGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf