prot_P-littoralis_Contig81.146.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig81.146.3
Unique Nameprot_P-littoralis_Contig81.146.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length386
Homology
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A6H5KL44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL44_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 4.700e-168
Identity = 235/304 (77.30%), Postives = 267/304 (87.83%), Query Frame = 0
Query:    8 QAAGAS-LLAVGLATVCWYAFGALGREKSRSPPGSIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTRQALV 310
            QAA A  LLA+G+A   W      GR+   S    IR+LRGFEP E+LKDEDDGRVVTFLGRF WQKEGEVALVKLIAKP++L  L+DNLSRL+ +LKS+SGAEY+FYDCS+SLW TFLRG+EGNSYSLEVVAPASERTVNRNRPVTTAM+ ETAEMHASVT PH+D +VGDG++LSWLFNVLSK+KEA+RVL ED DPEHGF+LNIDTKWRTHPDIST P+ EW GHPSV ELYCLAI H+RGIRTLRDLR++HVPMLKE+Y RGV+TIEAVYGVPEDQLRVFVHY+PQFFHFHVHFTR+ ++
Sbjct:   12 QAAAAGVLLAIGVAVAFWV-IARRGRKSVTSALAGIRSLRGFEPEEVLKDEDDGRVVTFLGRFAWQKEGEVALVKLIAKPLSLSGLKDNLSRLSIRLKSDSGAEYSFYDCSLSLWYTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKEKEAERVLYEDEDPEHGFLLNIDTKWRTHPDISTTPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRRVVL 314          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A0M0JXI4_9EUKA (Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXI4_9EUKA)

HSP 1 Score: 245 bits (626), Expect = 1.310e-75
Identity = 122/247 (49.39%), Postives = 170/247 (68.83%), Query Frame = 0
Query:   62 VVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDIST--VPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 306
            ++  LGRF+WQ +GE ALVKL+ KP++L +    L  L   + S SGAEY +YD   SL +         +YS+EV+APASE+ + R RP    ++ E A ++ASV  P I+++  D +A++W+ N+L+ +KE +R+L  D+DPE GF+LNIDTKW++HP   +    +  W  H SV +LYCLAICHRR +R+LRDLR+ H+P+L+ +   G   IEAVYGVP D+LRVFVHY PQF+HFHVHFTR
Sbjct:    1 MIVVLGRFSWQAKGETALVKLVPKPLSLAS--GLLGALDVNVSSYSGAEYCYYDGRCSLSSLCTTAGLRPAYSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDSDPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTR 243          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S3SDN6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SDN6_EMIHU)

HSP 1 Score: 229 bits (583), Expect = 3.830e-68
Identity = 125/268 (46.64%), Postives = 168/268 (62.69%), Query Frame = 0
Query:   41 SIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQ--EEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 306
            S+R L  F+ +E+L  E +G  V  LG F+WQ  GE ALVK+ A         D  + L   L S SGAEYA+Y  S SL +   +     +++LEV+APASE+ + R+RP     V ETA ++ +  AP+ID +  D ++ SW+   L   KEA+RVL  D     GF+LN+DTKW++HP  +  PQ    W GH +V +LYCLAICHRR IR+LRDL +EH+P+L+ +  +GV T+   YGV    LRVFVHY PQF+HFHVHFTR
Sbjct:   39 SLRDLSSFKQSEVLS-EGEGHAV-LLGAFSWQPAGERALVKISAVDRASS---DVAAHLETSLSSYSGAEYAYYRGSASLASVLWKRP---AFALEVIAPASEKQIARSRPQPGVFVTETAALYHAAVAPYIDAL--DPKSTSWIDKCLDLSKEAERVLFNDPAEPTGFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDLTAEHLPLLRRILDQGVRTLCETYGVEPHDLRVFVHYQPQFYHFHVHFTR 296          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: W7TMI8_9STRA (Histidine triad protein member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMI8_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.860e-62
Identity = 119/297 (40.07%), Postives = 170/297 (57.24%), Query Frame = 0
Query:   45 LRGFEPTEILKDE----DDGRVVTFLGRFTWQKEGEVALVKLIAKPMTL---------------------------DTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDA----DPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 306
            LR F   E+L DE     DG  V  LGRFTWQ   E A++K+  + +                              +L   LS L+ +++ ESGAEY +Y  S+S  +    G+   +Y +EV+APAS R + R       ++ E+  ++     P  D V G+GR+L W++N+L  +KEA+R++ ED     D   GF+L  D KW++HPD S  P+EEW  HPS + L CLAI H R I +LRDLR  H+P+L+ +  +G+  IEAVYGV ++++RVFVHY+PQFFHFHVHF+R
Sbjct:   42 LRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIP-LTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSR 336          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S1J2I8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2I8_9EUGL)

HSP 1 Score: 196 bits (498), Expect = 9.960e-58
Identity = 93/183 (50.82%), Postives = 124/183 (67.76%), Query Frame = 0
Query:  105 SESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQL 287
            S SGAEY +Y    SLW+       G  YSLEV+APA++R + R+R +   M+ ET E +  VT P I ++V  G +L WL+NVL  +KE +R+L  D DP+ GFILN+DTKW++HP+  TVP+  W GHPSV  LYCL ICHRR I +LRDLRS H+P+L+ M R+G  TI+  YG+  D+L
Sbjct:   24 SYSGAEYCYYAGQPSLWSILADPELGRQYSLEVIAPATDRQIERSRLLPHRMIEETREDYKRVTEPFIFSIVSSGTSLQWLYNVLELKKETERLLYNDPDPKVGFILNVDTKWKSHPNCHTVPRASWKGHPSVRWLYCLGICHRRDIASLRDLRSCHLPLLQAMLRKGQQTIKEDYGLEPDEL 206          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S2HS95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HS95_9EUKA)

HSP 1 Score: 196 bits (498), Expect = 2.180e-57
Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 0
Query:  110 EYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPD-ISTVPQEE-WHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 306
            EYA+YD   SL +  +      +Y+LEV+APASE+ + R+RP     VVETA ++ +V  P I+++  D  A +W+  VL   KE +RVL  D +PE GF+LN+DTKW++HP  +  V Q   W GH SV +LYCLAI HR  +R+LRDLR  H+P+LK +  RG +TI  VYGV   + RVFVHY PQF+H HVHFTR
Sbjct:    1 EYAYYDAVSSLRHLLINRRLRPAYALEVIAPASEKQIARSRPQAGVFVVETAAVYNAVVRPFIESL--DPAATAWIRKVLDLSKEKERVLFNDTNPETGFLLNVDTKWKSHPPCVEDVAQRAAWRGHESVKDLYCLAIVHRSDLRSLRDLRESHLPLLKHILLRGTETIRNVYGVQPAECRVFVHYQPQFYHLHVHFTR 197          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S4D8L5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8L5_HETAK)

HSP 1 Score: 198 bits (504), Expect = 6.750e-57
Identity = 106/287 (36.93%), Postives = 168/287 (58.54%), Query Frame = 0
Query:   42 IRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDAD--PEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLR-SEHVPMLKEMYRRGVDTIEAVYGVPED-----------------QLRVFVHYLPQFFHFHVHFTRQA 308
            ++ L GF+  E+L D ++G+ V   G       G+ A++K  +   T + L  NL      L SESGAEYA++  ++   +  +   +  SY LE++ PAS+R + R+  V   +V ET++ +A++T P+I +V+GDG +L W++N+L K+KE +R++ +     PE  FI+NIDTKW+THPD    P+E+W       ++YCL I   RG+++LRDLR + H+P+L+ +   G+  + A+Y +P                   QLRVFVHY PQF+HFHVH+   A
Sbjct:    6 LKHLSGFQFEEVLTDNNNGQFVVLKGILN----GKPAVLKFNSLHATAEQLLSNLCSAKLDLHSESGAEYAYFHATI---HNGVSKKQNPSYHLEIICPASDRQIRRSTTVPLILVDETSKDYANITLPYIQSVIGDGGSLQWVYNILDKKKEVERIVYDTGGTGPE-DFIINIDTKWKTHPDPKETPREKWKDLVKPEDIYCLGIVQLRGLKSLRDLRGAAHLPLLRRLAGEGLSQVAALYSLPRGPGGXXXXXXXXXARLRRQLRVFVHYQPQFYHFHVHYVHAA 284          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S2XNU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNU1_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.450e-56
Identity = 106/243 (43.62%), Postives = 150/243 (61.73%), Query Frame = 0
Query:   76 EVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDC---------SMSLWNTF--LRGVEGNSYSLEVVAPASERTVNRNRPV-TTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 306
            E   V+ +     L  L D   RLT    SESGAEY++Y+           +    TF      +G  + +E+++PA+ R + R  P  +TA+V ET EM+ +VT P I ++  +G +LSW+ NV+  +KE +R+L    D    F+LN+DTKWR+HPD  + P+ EW+ HP+  +LYCL I  + G+RTLRDLR EHVPMLK M + G   I+ +YG+  +Q+RVFVHY PQF+HFHVHFTR
Sbjct:   46 ETEKVESVPSSTVLSFLSDFHFRLT----SESGAEYSYYEALPTPIFSEGQVERTPTFPGASSTQGG-FKMEMISPATYRQIARAMPAPSTALVNETPEMYQTVTEPFIASIC-EGNSLSWICNVVDAKKEVERLLVNHKD----FVLNVDTKWRSHPDALSTPRSEWYQHPATADLYCLGIVKQSGLRTLRDLRGEHVPMLKAMMQEGTKAIQTIYGIESNQIRVFVHYQPQFYHFHVHFTR 278          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: K8EMC5_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EMC5_9CHLO)

HSP 1 Score: 197 bits (501), Expect = 2.820e-56
Identity = 109/296 (36.82%), Postives = 163/296 (55.07%), Query Frame = 0
Query:   39 PGSIRTLRGFEPTEILKDEDD----GRVVTFLGRFTW---QKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSE-SGAEYAFYDCSMSLWNTFLRGVEGNS--------YSLEVVAPAS-------------ERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFT 305
            P  ++TLRGF+ ++IL D  D    G VV  LG F     ++E E  ++KL   P+ LD L+     +T   +   SG EY +Y            GV  NS         S++V+ P                + ++RN+     +  E  + + +   P+I+ +     A+ W+  +L+K+KE +R+L +D D   GF+LN D KW THPD  T P+E+W  HPS  ELYCL +CHR+ +R+LRDLR+ H+PML+ M ++G + I+  YG+  + LR+FVHY PQF+HFHVHFT
Sbjct:    7 PEKLQTLRGFKVSKILNDGKDSSSFGNVVALLGTFPGLMEEEEEESVVLKLSRPPIPLDDLDQLADAITLYERMPYSGMEYGYY-----------HGVVNNSSETFFAPYVSVDVLYPGCLKDESKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAIPSS--AIGWVHKILNKEKELERLLFDDDDVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFT 289          
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: C1MPA0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPA0_MICPC)

HSP 1 Score: 194 bits (493), Expect = 2.590e-55
Identity = 103/276 (37.32%), Postives = 157/276 (56.88%), Query Frame = 0
Query:   39 PGSIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSE-SGAEYAFYDCSMSLWNTFLRGVEGN--------SYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFT 305
            P  + +LRGF+ + +L D  +  VV  LG F       V  VKL   P+ L  L+   + +T   ++  SG EY +Y   ++  + F  G+  +        + S E  A    + V+RN      +  E    +A+   P+ID +     A+ W++ +L+K+KE +R+L +D D   GF++N D KW THPD    P+E+W  HP   ELYCL +CHR+ +R+LRDLR+ H+PML+ M R+G + I+  YG+ ++ LR+FVHY PQF+HFHVHFT
Sbjct:   10 PDRLPSLRGFKTSRVLNDGKESGVVALLGTFPGCDTESV--VKLSRPPIPLGDLDGLATAVTLSERAPYSGMEYGYYHGVVA--SEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAIPSS--AIGWVYKILNKEKELERLLFDDDDANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFT 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL44_9PHAE4.700e-16877.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0M0JXI4_9EUKA1.310e-7549.39Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochro... [more]
A0A7S3SDN6_EMIHU3.830e-6846.64Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
W7TMI8_9STRA9.860e-6240.07Histidine triad protein member n=2 Tax=Monodopsida... [more]
A0A7S1J2I8_9EUGL9.960e-5850.82Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S2HS95_9EUKA2.180e-5749.75Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S4D8L5_HETAK6.750e-5736.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XNU1_9STRA1.450e-5643.62Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K8EMC5_9CHLO2.820e-5636.82Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
C1MPA0_MICPC2.590e-5537.32Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availablePFAMPF11969DcpS_Ccoord: 183..308
e-value: 2.5E-24
score: 85.9
NoneNo IPR availablePIRSRPIRSR028973-1PIRSR028973-1coord: 54..305
e-value: 1.2E-44
score: 150.8
NoneNo IPR availablePIRSRPIRSR028973-2PIRSR028973-2coord: 54..305
e-value: 1.2E-44
score: 150.8
IPR036265HIT-like superfamilyGENE3D3.30.428.10coord: 154..313
e-value: 1.5E-48
score: 167.2
IPR036265HIT-like superfamilySUPERFAMILY54197HIT-likecoord: 155..309
IPR008594Scavenger mRNA decapping enzyme DcpS/DCS2PANTHERPTHR12978HISTIDINE TRIAD HIT PROTEIN MEMBERcoord: 43..306
IPR011145Scavenger mRNA decapping enzyme, N-terminalSUPERFAMILY102860mRNA decapping enzyme DcpS N-terminal domaincoord: 45..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig81contigP-littoralis_Contig81:494962..499063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig81.146.3mRNA_P-littoralis_Contig81.146.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig81 494665..500135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig81.146.3 ID=prot_P-littoralis_Contig81.146.3|Name=mRNA_P-littoralis_Contig81.146.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp
MEETGGFQAAGASLLAVGLATVCWYAFGALGREKSRSPPGSIRTLRGFEP
TEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLT
AKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNR
PVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLC
EDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRG
IRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHF
HVHFTRQALVFKYFLSALADSYSPFACSSKTQGSGALRACVCVCVCMCTQ
APVVILVSQTMPTSCQLKIHQFFQLYICCSSFLVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
IPR008594DcpS/DCS2
IPR011145Scavenger_mRNA_decap_enz_N