mRNA_P-littoralis_Contig808.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.090e-39 Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 1 MASAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 240
MAS K TYN MVFDAIK+LKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPAPK
Sbjct: 1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 137 bits (344), Expect = 5.460e-37 Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 1
Query: 7 SAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAP 237
+AK TYN MVFDAIK+LKERNGSSIQAIKKSITATYPTLNFTPHQMR ALKKG ESGKFIK+K+SYKLSPEAKKPAP
Sbjct: 96 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 127 bits (318), Expect = 2.860e-34 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 1
Query: 7 SAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 234
+AK TY+ MVFDAIK+LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA
Sbjct: 4 TAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE) HSP 1 Score: 126 bits (317), Expect = 3.610e-34 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 1
Query: 31 MVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 240
MVFDAIK+LKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPAPK
Sbjct: 1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 125 bits (315), Expect = 1.290e-33 Identity = 65/70 (92.86%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 31 MVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 240
MVFDAIKSLKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKG E+GKFIKVKSSYKLS EAKKP PK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.630e-31 Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 1
Query: 31 MVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 234
MVFDAIK+LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.540e-25 Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 1
Query: 19 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 231
TY+ M AI +LKERNGSS+ AIKK I ATYPTLNF PHQ+R ALKKGTE+G FIKVK+SYK+SPEAKKP
Sbjct: 3 TYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE) HSP 1 Score: 101 bits (251), Expect = 3.400e-25 Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 1
Query: 31 MVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSP 216
MVFDAIK+LKERNGSSIQA+KKSITATYP L+FTPHQMRSALKKG E+GKFIKV+ + L+P
Sbjct: 1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLAP 62
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 101 bits (251), Expect = 6.910e-23 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 19 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPKP 243
TY+ M +A+K+LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKG ESGKFIKVK+SYKLS ++PA KP
Sbjct: 3 TYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKP 77
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.770e-20 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 19 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGTESGKFIKVKSSYKLS 213
TY+ M +A+K+LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKG ESGKFIKVK+SYKLS
Sbjct: 3 TYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig808.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig808.8.1 >prot_P-littoralis_Contig808.8.1 ID=prot_P-littoralis_Contig808.8.1|Name=mRNA_P-littoralis_Contig808.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=168bp MASAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPTLNFTPHQMRSback to top mRNA from alignment at P-littoralis_Contig808:41395..45672- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig808.8.1 ID=mRNA_P-littoralis_Contig808.8.1|Name=mRNA_P-littoralis_Contig808.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4278bp|location=Sequence derived from alignment at P-littoralis_Contig808:41395..45672- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig808:41395..45672- >mRNA_P-littoralis_Contig808.8.1 ID=mRNA_P-littoralis_Contig808.8.1|Name=mRNA_P-littoralis_Contig808.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=504bp|location=Sequence derived from alignment at P-littoralis_Contig808:41395..45672- (Pylaiella littoralis U1_48)back to top |