prot_P-littoralis_Contig79.133.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig79.133.2
Unique Nameprot_P-littoralis_Contig79.133.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length506
Homology
BLAST of mRNA_P-littoralis_Contig79.133.2 vs. uniprot
Match: D7G1Q6_ECTSI (EF hand family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q6_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 1.820e-205
Identity = 318/505 (62.97%), Postives = 364/505 (72.08%), Query Frame = 0
Query:    1 MSSLSSAMFAGYNKFDNAKVRIGSWREELALKELTGVTRLANPRDKAVFNATGVRVLYHADKPGEKDPGEGKSVSETSFVHPEKVSTTKDRSAYRAPGPRSVLAKQRTRQCSYLHLPVHPFRAILASEVAERAALEVEKKNKGDFDTTFKQSYRRYSDEASRSAKQESLKPRPNKPKQGASGPTPETLAVNASDIIASGSEPEF-EVGHYSTGKTITLWDAGGMAHGGKHGRGLFGRTSTFTEPGVHPSFFQEVWPDPGPHHKSLPRGLSDLEAASLMFLKRRVLERAQKQPLPSVRGLWRLLWPRTYRDAVGKIGQREFREAMAAFEVPVTQCEVWTVTTAFDNDGSGQICLDKLIHFVRVGGLSEARRNRVRELFRRLDSTNAGEVSLGRILAACDFSRLPAVTKGKTGEGQVAAAFQQHFNINGESRAGEKVDMVSTERFQEAFRDIGAACVDTEETCTWEAACPRRHSECKEGVDVDTVGKDKDKDEGDLLFEAVLSSLGG 504
            M+SL SAMFAGYNKFD+AKVRIGSWREELA+KELTGVTRLANPR++AVFNAT VRVLYHADKPG KD G GKS S TS++HPEKV+ TK+RSAY  PGPR+V ++Q  ++             I+ +E AER ALE EKK  GDFDTTF+QSY+RYSDEASR+AKQ+S+KP+P    Q    P P T A   S   +     E  EVGHYSTG T+TLW+ GGMA GG   R  FGRTS FTEPGVHPSFFQEVW DPGPHH SLPRGLSDLEA SLMFLK RV+ERAQ++PLPSVRGLWRLLWPRTY DAVGK+G  EFRE MA FEVPVT+CEVW VTTAFD D  GQICLDKL+HF R GGLSEARR  V +LFR LDS N G V L  I AACDFS  PAV +GK  E ++   F QH   N +   GE   MV+ E FQ+AFRDIG AC      C+WEAA  +   + +  +D D  G       G+ LF  V+SS+GG
Sbjct:    1 MASLRSAMFAGYNKFDDAKVRIGSWREELAMKELTGVTRLANPRNRAVFNATDVRVLYHADKPGAKDAGRGKSESHTSYIHPEKVAATKERSAYIRPGPRAVRSRQAAKE-------------IVQAEEAEREALEREKKKDGDFDTTFRQSYKRYSDEASRAAKQDSVKPQPENAPQA---PAPTTKAFKNSMRRSGDVMSEIGEVGHYSTGTTVTLWNTGGMAPGGTADRASFGRTSRFTEPGVHPSFFQEVWRDPGPHHASLPRGLSDLEARSLMFLKNRVIERAQEKPLPSVRGLWRLLWPRTYVDAVGKVGPAEFREGMAEFEVPVTKCEVWAVTTAFDTDNRGQICLDKLMHFFRAGGLSEARRKVVHKLFRGLDSANTGAVPLSSIRAACDFSSSPAVIEGKACEEEITTEFLQHLQNNEQEGLGESSSMVTAEHFQDAFRDIGTACTSLA-ACSWEAASLQEEKKDRGHLDTDADGN-----AGEALFMGVVSSVGG 483          
BLAST of mRNA_P-littoralis_Contig79.133.2 vs. uniprot
Match: A0A6H5L3H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H9_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 5.780e-163
Identity = 273/470 (58.09%), Postives = 306/470 (65.11%), Query Frame = 0
Query:    1 MSSLSSAMFAGYNKFDNAKVRIGSWREELALKELTGVTRLANPRDKAVFNATGVRVLYHADKPGEKDPGEGKSVSETSFVHPEKVSTTKDRSAYRAPGPRSVLAKQRTRQCSYLHLPVHPFRAILASEVAERAALEVEKKNKGDFDTTFKQSYRRYSDEASRSAKQESLKPRPNKPKQG-------------------------------------ASGPTPETLAVNASDIIASGSEPEF-EVGHYSTGKTITLWDAGGMAHGGKHGRGLFGRTSTFTEPGVHPSFFQEVWPDPGPHHKSLPRGLSDLEAASLMFLKRRVLERAQKQPLPSVRGLWRLLWPRTYRDAVGKIGQREFREAMAAFEVPVTQCEVWTVTTAFDNDGSGQ-------------------------ICLDKLIHFVRVGGLSEARRNRVRELFRRLDSTNAGEVSLGRILAACDFSRLPAVTKG 407
            M+SL SAMFAGYNKFD+AKVRIGSWREELA+KELTGVTRLANPR+KAVFNAT VRVLYHADKPG KD G G S S TS++HPEKV+ TK+RSAY  PGPR+V ++   ++             I+ +E AER ALE EKK  GDFDTTF+QSY+RYSDEASR+AKQ+S+KP+P    QG                                        P P T  +         +  E  E GHYSTG T+TLW+ GGMA GGK  R   GRTS FTEPGVHPSF QEVWPD GPHH SLPRGLSDLEA SLMFLK+RV+ERAQ++PLPS+RGLW    PRTY DAVGKIG  EFRE MA FEVPVT+CEVW VTTAFD +  GQ                         ICLDKLIHF R GGLSEARR  V ELFR LDS N G V L  I A CDFS  PAV +G
Sbjct:    1 MASLRSAMFAGYNKFDDAKVRIGSWREELAMKELTGVTRLANPRNKAVFNATDVRVLYHADKPGAKDAGRGTSESHTSYIHPEKVAATKERSAYIRPGPRAVRSRLAAKE-------------IVLAEEAEREALEREKKKDGDFDTTFRQSYKRYSDEASRAAKQDSVKPQPENAPQGNHPTDIFKPTWQPIPKLPADLFVTKYLCSGHAARAVPTKAPAPSTKVLKNGMTRGGDAMSEIGEGGHYSTGTTVTLWNTGGMARGGKADRASLGRTSRFTEPGVHPSFSQEVWPDAGPHHASLPRGLSDLEARSLMFLKKRVIERAQEKPLPSMRGLW----PRTYADAVGKIGPAEFREGMAEFEVPVTKCEVWVVTTAFDTNNRGQEDAQRHGLHRSFKTKATNDFPVILQICLDKLIHFFRAGGLSEARRKVVHELFRGLDSANTGAVPLSSIRAVCDFSSSPAVIRG 453          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.133.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Q6_ECTSI1.820e-20562.97EF hand family protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L3H9_9PHAE5.780e-16358.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 365..463
e-value: 7.7E-10
score: 41.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..97
NoneNo IPR availablePANTHERPTHR34524:SF6CALCYPHOSINE-LIKE Acoord: 274..453
NoneNo IPR availablePANTHERPTHR34524CALCYPHOSINcoord: 274..453
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 309..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:599125..612066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.133.2mRNA_P-littoralis_Contig79.133.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig79 599125..612066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig79.133.2 ID=prot_P-littoralis_Contig79.133.2|Name=mRNA_P-littoralis_Contig79.133.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=506bp
MSSLSSAMFAGYNKFDNAKVRIGSWREELALKELTGVTRLANPRDKAVFN
ATGVRVLYHADKPGEKDPGEGKSVSETSFVHPEKVSTTKDRSAYRAPGPR
SVLAKQRTRQCSYLHLPVHPFRAILASEVAERAALEVEKKNKGDFDTTFK
QSYRRYSDEASRSAKQESLKPRPNKPKQGASGPTPETLAVNASDIIASGS
EPEFEVGHYSTGKTITLWDAGGMAHGGKHGRGLFGRTSTFTEPGVHPSFF
QEVWPDPGPHHKSLPRGLSDLEAASLMFLKRRVLERAQKQPLPSVRGLWR
LLWPRTYRDAVGKIGQREFREAMAAFEVPVTQCEVWTVTTAFDNDGSGQI
CLDKLIHFVRVGGLSEARRNRVRELFRRLDSTNAGEVSLGRILAACDFSR
LPAVTKGKTGEGQVAAAFQQHFNINGESRAGEKVDMVSTERFQEAFRDIG
AACVDTEETCTWEAACPRRHSECKEGVDVDTVGKDKDKDEGDLLFEAVLS
SLGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair