mRNA_P-littoralis_Contig784.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig784.4.1
Unique NamemRNA_P-littoralis_Contig784.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 6.670e-124
Identity = 187/330 (56.67%), Postives = 236/330 (71.52%), Query Frame = 1
Query:   31 RLLRLMDLLAVLDNLHKLETPTTTGKPRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNF 1020
            R+ +L++LL ++  + + + P T  K     + RERR+W  Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+  MGALRNG +PVE+Q+ + LR+LAG S+++ MDG+VIARSTAY    RVI AIN   ELDC WP   ED  D+   + +R + GVIR CVGAMDGLFVR  +P+ R    P S+YSGHKKGFGMNFQ +C+A + II  AWTMN PG  NDRTAFK S F  +L+ LPP  +I+GDAAYPASD+VLVPYPGT+L    DA+NF+QSQ RISIEQ F IMV    WGILWRP+D  L RV  V+ +VVR+HNF
Sbjct:   19 RMRQLLELLMIMVLMDEGDPPQTRDK----FVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEII--AWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVK--TWGILWRPLDMRLERVSSVINSVVRLHNF 339          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 6.680e-118
Identity = 176/303 (58.09%), Postives = 220/303 (72.61%), Query Frame = 1
Query:  112 RSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNF 1020
            R   + RERR++  Y++PM+ D TF+ RFRM + DF  L D LRP+L+RD  MGALRNGA+PVE+Q+ +TLR+LAG S+++ MD +VIA+STAY    RVI AIN   +L+CKWP   +D   +A  + +R + GVIR+CVGAMDGLFVR I P  +  A P S+YSGHKK FGMNFQ IC+A + II   WTMN PG QNDRTAFK SGF+ LL  +PPD FI+GDAAYPAS+RVLVP PGT L    DA+NF+QSQ RISIEQ F I+V    W ILW+P+   L RV  V+ A+VR+HNF
Sbjct:   46 RGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIIT--WTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVK--TWEILWKPLAIRLDRVGHVMNAIVRLHNF 343          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 2.030e-112
Identity = 163/267 (61.05%), Postives = 203/267 (76.03%), Query Frame = 1
Query:  223 ILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNFC 1023
            +LVDHLRP L+++  MG LRNGA+PVE QV +TLRWLAG S+Y+ MDGHVIARSTAY     VI A+N C EL+CKWP   ED A  A  F  R S+ V+RKCVGA DGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +CDA++RI+  AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+ I+V    WGILWRPM+  + +   VV AVVR+HNFC
Sbjct:   72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIM--AWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRR--WGILWRPMEVRIEKFEHVVNAVVRLHNFC 333          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.180e-111
Identity = 179/338 (52.96%), Postives = 225/338 (66.57%), Query Frame = 1
Query:   10 RLRRMTARLLRLMDLLAVLDNLHKLETPTTTGKPRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNFC 1023
            RL  +T R+  L+D LA+LDNL  L+ PT     RSTL+ RERR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++   G LRNGA+PVEYQV +TLRWLAG S+Y+ MDGHVIARSTAY     VI A+N C EL+CKWP   ED+ +  +       + V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +C                  QNDRTAF FSGF++LL  LP  +F++G+AAY AS+RV+VP+PGT+ P                 EQT+ I+V    WGILWRPM+  + +   VV AVVR+HNFC
Sbjct:   14 RLASVTKRVSSLLDALAILDNLSALDAPTKRN--RSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS-----------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRR--WGILWRPMEVRIEKFEHVVNAVVRLHNFC 312          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 8.360e-84
Identity = 147/323 (45.51%), Postives = 189/323 (58.51%), Query Frame = 1
Query:   25 TARLLRLMDLLAVLDNLHKLETPTTTGKPRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVV 993
            T R+  L+D LA+L NL  L+ PT     RSTL+ RERR +  +IKP+L D TF  RFRM + DF++L+DHLRP L ++  MG LR GA+PVEYQ+ +TLRWLAG S+Y+ MDGHVIARSTAY     VI A+N C EL+CKWP    DV               +RKCVGAMDGLFVR I+P+ ++ AEPN YY+GH+KG                                                   ++GDAAY AS+RV+VP+PGT+L    DA N + SQ R++IEQT+ I+V    WGILWRPM+  + +   VV
Sbjct:   19 TKRVSSLLDALAILGNLSALDAPTKRN--RSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV--------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRR--WGILWRPMEVRIEKFEHVV 272          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.270e-82
Identity = 129/228 (56.58%), Postives = 157/228 (68.86%), Query Frame = 1
Query:  337 GASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNF 1020
            G S+++ MDG V A+STAY   +RVI AIN   E DC WP   +D  D+   + +R +  VI  CVGAMDGLFV    P+ R    P  +YSGHKKGFGMNFQ +C+A ++I  TAWTMN PG  NDRTAFK SGFE++L+ LP   +I+GD AYPASD+VLVPYPGT L    D++NF+QSQ RI IEQ F  MV    WGILWRP+   LGRV  V+ AVVR+HNF
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKI--TAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVK--TWGILWRPLQVKLGRVSSVMNAVVRLHNF 273          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 1.270e-75
Identity = 146/340 (42.94%), Postives = 186/340 (54.71%), Query Frame = 1
Query:   10 RLRRMTARLLRLMDLLAVLDNLHKLETPTTTGKPRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVV--EVVGAVVRVHNFC 1023
            RL  +T R+  L+D LA+LDNL  L+ P+   + RSTL+ R RR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++  MG LRNGA+PVEYQV +TLRWLAG S Y+ MDGHVIARSTAY                                                                                     +CDA++RI+  AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+ I+VS             G+ +VV   VV AVVR+HNFC
Sbjct:   14 RLASVTKRVSSLLDALAILDNLSALDPPSM--RSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA-----------------------------------------------------------------------------------VCDAQYRIM--AWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSV-----------VGMAKVVVEHVVNAVVRLHNFC 255          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.430e-68
Identity = 103/171 (60.23%), Postives = 134/171 (78.36%), Query Frame = 1
Query:  511 VGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNFC 1023
            V V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHK GFGMNFQ +CDA++RI+  AWTM+ PG QNDRTAF F+ F++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+ I+V    WGILWRPM+  + +   VV AVVR+HNFC
Sbjct:   15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIV--AWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRR--WGILWRPMEVRIEKFEHVVNAVVRLHNFC 181          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 5.410e-57
Identity = 112/299 (37.46%), Postives = 166/299 (55.52%), Query Frame = 1
Query:  133 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALR--NGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKW-PATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNF 1020
            +R  W  +   +     FK  +RM    F+ L + L P L  +     LR  NGA+ V+ ++ + LR LAGAS         +   T Y T + VI AIN   E+   + P T  D    AA F+++ + G+   CV  +DGLFV+T+ P+ +DTA   +YYSG K  +G+N Q +C A++R    + +  +PG  ND  A+  S   + +  LP  +++LGDAAYP S+++L PYPG NLP   D+FNF  SQ R+ IEQ+F I+V    WGILWRP+        +++ A+ R+HNF
Sbjct:   66 QRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFC--SMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVG--TWGILWRPLKVDFAGRTDLITALFRLHNF 360          
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 4.820e-54
Identity = 109/311 (35.05%), Postives = 167/311 (53.70%), Query Frame = 1
Query:   97 TTGKPRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGA--LRNGAVPVEYQVGLTLRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELD-CKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIMVSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNF 1020
            +  K R+ +    R  W  +   +      +  +RM    F  L   L P L+          R GAV  + ++ + LR +AGAS         +++ TA+   ++V+ AIN   E+    +P + ++   +AA +E++ + G  +  V A DGLFV+T+ PT  +T    SYYSG K G+G+N Q  CDA +R    + +  +PG  ND TA+  S     +++LPP +++LGDAAYP SD +L PYPG  LP   DAFNF+ SQ R+ IEQ F I+V    WGILW+P+        +++ A+ R+HNF
Sbjct:   61 SANKTRAAIHEPRRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFC--SMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQ--WGILWKPLRVQFAGRCDLITALFRLHNF 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig784.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3F2_9PHAE6.670e-12456.67DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE6.680e-11858.09DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6B6_9PHAE2.030e-11261.05DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE1.180e-11152.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS8_9PHAE8.360e-8445.51DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE2.270e-8256.58DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K540_9PHAE1.270e-7542.94DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE2.430e-6860.23DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5L386_9PHAE5.410e-5737.46DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JV75_9PHAE4.820e-5435.05DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig784contigP-littoralis_Contig784:49328..51287 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size1023
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.2e-39
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size1002
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791610.8832297-CDS-P-littoralis_Contig784:49327..494251680791610.8832297-CDS-P-littoralis_Contig784:49327..49425Pylaiella littoralis U1_48CDSP-littoralis_Contig784 49328..49425 -
1680791610.9045103-CDS-P-littoralis_Contig784:49957..502371680791610.9045103-CDS-P-littoralis_Contig784:49957..50237Pylaiella littoralis U1_48CDSP-littoralis_Contig784 49958..50237 -
1680791610.920412-CDS-P-littoralis_Contig784:50642..512661680791610.920412-CDS-P-littoralis_Contig784:50642..51266Pylaiella littoralis U1_48CDSP-littoralis_Contig784 50643..51266 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791610.9338078-UTR-P-littoralis_Contig784:51266..512871680791610.9338078-UTR-P-littoralis_Contig784:51266..51287Pylaiella littoralis U1_48UTRP-littoralis_Contig784 51267..51287 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig784.4.1prot_P-littoralis_Contig784.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig784 49328..51266 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig784.4.1

>prot_P-littoralis_Contig784.4.1 ID=prot_P-littoralis_Contig784.4.1|Name=mRNA_P-littoralis_Contig784.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=334bp
MTARLLRLMDLLAVLDNLHKLETPTTTGKPRSTLLLRERRAWPLYIKPML
GDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLT
LRWLAGASMYQGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPED
VADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHK
KGFGMNFQRICDAEFRIIITAWTMNSPGCQNDRTAFKFSGFEQLLQDLPP
DYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFVIM
VSPDVWGILWRPMDFGLGRVVEVVGAVVRVHNFC
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mRNA from alignment at P-littoralis_Contig784:49328..51287-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig784.4.1 ID=mRNA_P-littoralis_Contig784.4.1|Name=mRNA_P-littoralis_Contig784.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1960bp|location=Sequence derived from alignment at P-littoralis_Contig784:49328..51287- (Pylaiella littoralis U1_48)
CGTCTTCGGCGTTTGCGCAGAATGACAGCGAGACTGCTGCGGTTGATGGA TCTCCTCGCCGTACTAGATAACCTCCACAAGCTCGAAACTCCAACAACAA CAGGAAAGCCCCGCAGCACCCTGTTGCTGCGAGAAAGGCGAGCGTGGCCT CTTTACATCAAGCCCATGCTAGGAGACGGGACCTTCAAGGGGCGCTTCCG CATGCACCATGTCGACTTCAAGATCCTGGTTGATCATCTTCGGCCGGAGC TGGAGAGAGACACTACGATGGGAGCCCTCCGGAACGGCGCCGTTCCGGTC GAGTATCAGGTCGGTTTGACCCTGCGCTGGTTGGCTGGTGCGTCCATGTA CCAAGGCATGGACGGGCATGTCATCGCTAGGAGTACCGCATACCAGACAG CGTTTCGCGTTATCAAGGCCATCAACGACTGTACTGAGCTGGACTGCAAG TGGCCCGCCACGCCGGAGGACGTCGCCGACAAGGCCGCTCACTTCGAGAA ACGCTGCTCAGTCGGTGTTATCCGGAAATGCGTCGGGGCCATGGACGGGC TCTTTGTCCGCACCATCAGACCGACCACCAGAGATACAGCCGAACCGAAC AGCTACTACAGCGGTCACAAGAAGGGATTCGGCATGAACTTTCAGGTACA CACTACGAAATCTGAAGTAGAAGGGCGTCTTCTGTTTTCATGTACCCACC TCTCTCTCTCTCTCTACAATAAATATGGCATTGATGTCATAAAAACATAG GGATCCGTATTTGATGCTCTGGTGCACTCTGTTAGTACAGCAGTACATTT CCGTATGCACTACTGCTGTAATGTGCATGACACACCTTAACAACTACAAC TGCTGGAGCCCCTTCCGAATACGGACATGCCGCCTGACAAAAGAGAACAT GCATGTATGACAAAATTTGCAAATGCGGTGATAAGGCCATGTGGTAACCG CGGATGGCTGAAGTGCACATCGATCCGCTGTCCTACTCGATGTGAGTATG TGTCCCCAAAACTGAACTGTTCGCGAACTCTTGGCCTCTCACTTATACAG AGGATCTGCGACGCGGAGTTCAGGATCATAATCACCGCATGGACCATGAA CAGTCCCGGGTGCCAAAATGACCGCACGGCCTTCAAGTTTTCCGGGTTCG AACAGCTCCTCCAGGACTTGCCCCCGGACTACTTCATCCTGGGCGACGCG GCGTACCCCGCTTCCGACCGCGTCCTGGTCCCGTACCCCGGGACAAACCT GCCAACATTCCACGACGCCTTCAACTTCTGGCAGTCTCAGGGGCGGATCT CCATCGAGCAGACCTTCGTCATCATGGTGAGTGCTCAACGCTTCAGCTGC TGGACTTCCAAATGACGACCATTCGGGGACACCTATTTTGTGTAGCTGAG CTTGTTTGTGTGCGATCTCGAGGTATCTTGCGTGTCGACGATTTCGCCCA TTTCTCTTTGATTTTCCCGCCGCGCGCGGTCCAGCACTGACTGTCAGCTA AAGTACAAGTTTTTATCGTGGGCTGCTGCGATTCAAAAAATTTCACCGTT TGAAAGTCATGCGGGTAGCCTTGGTCCCCGCTTGCTGGTGTGTGCTGTTT CGGGGAGATTAGGACAGCTCCCAGTGTAGGACCAAGTCGCAATTTTGTTC AAGCGGCAGGGTAAGCGAGACGCGTGTTTTATTTTTTAGAGCTGTGCGAT TGGGGTCGATCACAGCTGTGAGCACACGCTTTCGACGAGCAAACTTCGTG ATTTTCTCTTTTGTCTGTTTATTTCAATTGTCTCTTTTCCTGCCAAGTAG TCGGAGACCATCCAACACCCACACCCGACGCCGTTCTTTCCCTGTGCTTG ATATTTAAAAAGGTCCGGACGTGTGGGGAATCCTTTGGCGCCCCATGGAT TTTGGGCTGGGGCGGGTTGTTGAAGTGGTGGGGGCCGTCGTTCGCGTGCA CAACTTCTGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig784:49328..51287-

>mRNA_P-littoralis_Contig784.4.1 ID=mRNA_P-littoralis_Contig784.4.1|Name=mRNA_P-littoralis_Contig784.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1002bp|location=Sequence derived from alignment at P-littoralis_Contig784:49328..51287- (Pylaiella littoralis U1_48)
ATGACAGCGAGACTGCTGCGGTTGATGGATCTCCTCGCCGTACTAGATAA
CCTCCACAAGCTCGAAACTCCAACAACAACAGGAAAGCCCCGCAGCACCC
TGTTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTACATCAAGCCCATGCTA
GGAGACGGGACCTTCAAGGGGCGCTTCCGCATGCACCATGTCGACTTCAA
GATCCTGGTTGATCATCTTCGGCCGGAGCTGGAGAGAGACACTACGATGG
GAGCCCTCCGGAACGGCGCCGTTCCGGTCGAGTATCAGGTCGGTTTGACC
CTGCGCTGGTTGGCTGGTGCGTCCATGTACCAAGGCATGGACGGGCATGT
CATCGCTAGGAGTACCGCATACCAGACAGCGTTTCGCGTTATCAAGGCCA
TCAACGACTGTACTGAGCTGGACTGCAAGTGGCCCGCCACGCCGGAGGAC
GTCGCCGACAAGGCCGCTCACTTCGAGAAACGCTGCTCAGTCGGTGTTAT
CCGGAAATGCGTCGGGGCCATGGACGGGCTCTTTGTCCGCACCATCAGAC
CGACCACCAGAGATACAGCCGAACCGAACAGCTACTACAGCGGTCACAAG
AAGGGATTCGGCATGAACTTTCAGAGGATCTGCGACGCGGAGTTCAGGAT
CATAATCACCGCATGGACCATGAACAGTCCCGGGTGCCAAAATGACCGCA
CGGCCTTCAAGTTTTCCGGGTTCGAACAGCTCCTCCAGGACTTGCCCCCG
GACTACTTCATCCTGGGCGACGCGGCGTACCCCGCTTCCGACCGCGTCCT
GGTCCCGTACCCCGGGACAAACCTGCCAACATTCCACGACGCCTTCAACT
TCTGGCAGTCTCAGGGGCGGATCTCCATCGAGCAGACCTTCGTCATCATG
GTGAGTCCGGACGTGTGGGGAATCCTTTGGCGCCCCATGGATTTTGGGCT
GGGGCGGGTTGTTGAAGTGGTGGGGGCCGTCGTTCGCGTGCACAACTTCT
GC
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