prot_P-littoralis_Contig780.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig780.11.1
Unique Nameprot_P-littoralis_Contig780.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length560
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig780.11.1 vs. uniprot
Match: A0A6H5KYM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM5_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.760e-22
Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 0 
Query:  475 MMLVGKADFVVTSPRSSYSALAAASGELSTQRIGGISCERLMNDPEFHSLQCAVSKWTVAQVQISDGWDKLYPVVVDNNRRRCE 558
            MMLVG AD  VTSPRSSYSALAAA G  STQR GGISC   +N+PEFH L+CA ++W V QV+    WD +Y +V ++NR RC+
Sbjct:    1 MMLVGNADIAVTSPRSSYSALAAARGGSSTQRYGGISCTEQVNEPEFHCLECAKNEWKVDQVKNPTEWDNIYHLV-ESNRARCK 83
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig780.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYM5_9PHAE1.760e-2260.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 368..508
e-value: 1.7E-7
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig780contigP-littoralis_Contig780:99083..106866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig780.11.1mRNA_P-littoralis_Contig780.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig780 98559..115811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig780.11.1 ID=prot_P-littoralis_Contig780.11.1|Name=mRNA_P-littoralis_Contig780.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=560bp
MHQSRVQNGDGQTFPRMKSMLCLLGICYATWRGLEILTTRFQAARVLALE
AEVRKGRGRRRASSAEETQQIGARGSSAFLAGDNRIGVVTEEINLGTDGG
TRAAESVFAPPEEADKFHSDRFWKAYATDRHSLLTRGVVIREGGKEDGGD
PETVDTSRVHPTKYVVFVTDHSHAGGLGNHMVGMMSAFAFSIAIGRVFLH
DWIEPRGMSVSYDDIFMRPFEPWDTSAANGSILSEPNYVLGEAVNFENNP
DGGAGASIEIEKSASAGGSWVVLPEVAVEKSEECSLDMGTPAGVRKHHFL
EVFIDKRGRDPRPDCPVIFVKSNQYLVDLLSSPAYGGSKVGNTPISEWLS
SGRAAQTLFAGLFRPAANVRQRLADESSRLYRMHQPTIAAHARASFLEDI
PTRDKFVGCMEQLAHSNNVTRVLLATESDSFQEHVISTLGLRGIEVVSMS
GVERLGEGGKMRNTADKIQMALTEMMLVGKADFVVTSPRSSYSALAAASG
ELSTQRIGGISCERLMNDPEFHSLQCAVSKWTVAQVQISDGWDKLYPVVV
DNNRRRCES*
back to top