mRNA_P-littoralis_Contig78.123.6 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig78.123.6
Unique NamemRNA_P-littoralis_Contig78.123.6
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: D8LT17_ECTSI (Methyl-accepting chemotaxis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT17_ECTSI)

HSP 1 Score: 683 bits (1762), Expect = 3.910e-239
Identity = 378/605 (62.48%), Postives = 442/605 (73.06%), Query Frame = 2 
Query:   74 MPFRAVTLCKPCLNKKRPLRKQLLLSFLTLAAVSLLLXXXXXXXXXXXXXETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALRDALQEDLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDLSRSTWYYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKSFMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWG---HFCYDTPFFLDIFSSL---YRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAA-GTKSLTGGSGYPDNPFTVKFV-RPPPTAPFSS 1864
            MPFRAV+LCKPCLNKK PLR QLLLSFL LAAVSLLL             + AKS+AR SLE+QI RHLTNAS E+A  + E FR LQYGVLDV+AFALRDA QE+L LDGG EGYPLTPAH DLRDTEI  S EA L +F R  + VDLSRSTWYYAD+ES+TV VP DE +TI Q+ARLDLLWP +YINS DTK ++VG+E + + R  R FPG +LSG+  S + CE V+  GS APC++PTVRPWY  A  A +D  T L  A+++DPY  A +++WL++LARAVYSDSGST GNLLGV+G+DV+LEQVQ SVE INFL TGYSILATAD GIVLA  VW         TVC +G GICS +DGD W DLLA+ +NGG+K+FTS ST   +E+ ILVAAPV+  F T  SGG G VTHY LS VP++EIFEPV  M   I  S +QII TTAIVA  TL+AVA +VYFL+GSITRPIVKMT+AARSIA DGAK DVFGSV  +WG       D+     I  S    + ++RT  LDYLLCRGDDEISTL +EFS MITGLGRRGSAA  T  +   +GYP NP+    V RPPPT P +S
Sbjct:    1 MPFRAVSLCKPCLNKKYPLRTQLLLSFLALAAVSLLLALAVVMGTTAFIGDKAKSEARDSLENQIKRHLTNASEESATAVREWFRNLQYGVLDVTAFALRDARQENLVLDGGNEGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYQGAEDAAVDSGTSLGAAIISDPYKDAIDDEWLLSLARAVYSDSGSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAGVWDKDATEEAPTVCAIGNGICSGSDGDEWVDLLAEIENGGIKSFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADSIRDSTVQIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVMATWGARRDSARDSADGRGIDVSTPGRFTVNRTACLDYLLCRGDDEISTLGREFSLMITGLGRRGSAAEATGLMDERAGYPKNPYAATIVKRPPPTGPSAS 604
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A6H5KHM1_9PHAE (HAMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHM1_9PHAE)

HSP 1 Score: 668 bits (1723), Expect = 4.080e-233
Identity = 374/600 (62.33%), Postives = 435/600 (72.50%), Query Frame = 2 
Query:   86 AVTLCKPCLNKKRPLRKQLLLSFLTLAAVSLLLXXXXXXXXXXXXXETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALRDALQEDLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDLSRSTWYYADSESFTVAVPA-DEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGA--AENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLA-GRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSIL--VAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKSFMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWGHFCYDTPFFLDIFSSL----YRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAAGTKSLTGGSGYPDNPFTVKFVRPPPTAP 1855
            A   CKPCLNKK PLRKQLLLS L+LAAVSLLL             + A+S+AR SLE QI RHL +ASVEAAATIGERFRK+QYGVLDV+AFALRDA QEDL L GG EGYPL+PAH DLRD EIT S+EA LV F RQD  VDLSRS WYYAD+ES TV V A ++Q  INQSARLDLLWP MYINSNDTK I +G+E + + ++FR FPG +LS +  SA+ CE V   G+ +PCY+PT R WY  A AA MD  T L  A+VT PY  A  +ENDWLVTLARAVY +SG+T G+LLGV+GVD++LEQVQ SVE INFL TGYSILATADEG+VLA G  W          VC+LG GICS ++GD W DLL +T+NGG+KTF ++ST           +AAP+  TF T  SGGEG VTHY LS VP+ EIF+PVD M  LI +S  +I+ TTAIVA  TL+AVA +VYFL+GSITRPIVKMT+AARSI++DGAK DVFGSVA +WG     +    D   S     Y ++RT  LDYLLCRGDDEISTLA+EF  MITGLGRRG+AA    L   S YP NPFT  F+RPPPT P
Sbjct:    6 ATAACKPCLNKKYPLRKQLLLSSLSLAAVSLLLALGVVMGTTAYIGDKAESEARDSLEAQIERHLRDASVEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLVLAGGEEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVLVDLSRSVWYYADAESNTVEVSAAEDQLKINQSARLDLLWPAMYINSNDTKGILLGVELSTTNQMFRYFPGTDLSAVEGSAFACEDVQEDGT-SPCYDPTERDWYELADAAVMDSETFLGGAIVTPPYTDAVGSENDWLVTLARAVYRNSGTTSGSLLGVVGVDMRLEQVQESVEGINFLETGYSILATADEGVVLAAGAAWDRDTAENITKVCDLGNGICSGDEGDSWEDLLLETKNGGIKTFKAVSTTGXXXXXXXXXIAAPITTTFGTAVSGGEGKVTHYILSAVPRDEIFQPVDGMADLIRESTTEIMVTTAIVACSTLVAVALSVYFLAGSITRPIVKMTSAARSISKDGAKTDVFGSVAATWGGRRDGSSGAGDSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAREFQLMITGLGRRGAAAEATGLAEASVYPKNPFTTDFIRPPPTNP 604
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: D8LT16_ECTSI (HAMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT16_ECTSI)

HSP 1 Score: 664 bits (1714), Expect = 5.390e-232
Identity = 362/584 (61.99%), Postives = 422/584 (72.26%), Query Frame = 2 
Query:   74 MPFRAVTLCKPCLNKKRPLRKQLLLSFLTLAAVSLLLXXXXXXXXXXXXXETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALRDALQEDLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDLSRSTWYYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKSFMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWGHFCYDTPFFLDIFSSLYRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAAGTKSLTGG-SGYPDNPFT 1822
            M FR V LCKPCLN+  PLRKQLLLSFL  A  SLLL             + A+  AR SLE+QI RHLTNAS EAA TIG RFRKLQYGVLDV+AFALRD  QEDL L GG EGYPLTPAH DLRDTEI  S EA L +F R ++ VDLSRSTWYYAD+ES+TV VP DE +TI Q+ARLDLLWP +YINS +TK ++VG+E + + R FR FPG +LSG+  S + CE V+  GS APC++PTVRPWY  A     D  T L  A++TDP+ GA ++DWLV LARAVYS+SG+T G+LLGV+G+DV+LE+VQ SVE INFL TGYSILATADEG+VLA  VW         TVC+LGIGICS  DGDGW DL+ADT+NG VK+FTS ST+  +E+ ILVAAPV+ TFDT  SGG G VTHY LS VP++EIFE V  M+ +I  S +QII  TAIVA CTL+AVA +VYFL+GSI RPIVKMT AARSI  DGA+ DVFGSVA  WG              S   +   + LDYLLCRGDDEISTL +EF  MITGLG+RG AA    L    +GYP NPFT
Sbjct:    1 MIFRVVGLCKPCLNQAYPLRKQLLLSFLAFATASLLLALAVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGDEGYPLTPAHTDLRDTEIATSAEANLQNFTRMNFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYETKGVYVGVELSTTGRTFRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGTTSGSLLGVVGMDVRLEEVQESVEAINFLDTGYSILATADEGVVLAAGVWDEDASEEAPTVCDLGIGICSGRDGDGWTDLIADTENGEVKSFTSKSTDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFETVVGMVDVIWDSTIQIIIPTAIVACCTLVAVALSVYFLAGSIVRPIVKMTKAARSITADGAETDVFGSVAADWGIKK----------DSARGVGGGRFLDYLLCRGDDEISTLGREFQLMITGLGKRGLAAEAIGLMEERAGYPMNPFT 574
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A6H5KHM8_9PHAE (HAMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHM8_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 4.890e-177
Identity = 326/614 (53.09%), Postives = 380/614 (61.89%), Query Frame = 2 
Query:  224 ETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALRDALQE-------------------------DLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDLSRSTWYYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAV---------VTDPYAGAAENDWLVTLARAVYS------------------DSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKSFMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWG----------HFC---YDTPFFLDIFSSLYRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAA-GTKSLTGGSGYPDNPFTVKFV-RPPPTAPFSS 1864
            + AKS+AR SLE+QI RHLT AS E+A  I E FR LQYGVLDV+ FALRDA QE                         DL LD G EGYPL  AH DLRDTEI  S EA L +F R  + VDLSRSTWYYAD+ES TV VP DE +TI Q+ARLDLLWPT+YINS DTK ++VG+E + + R  R FPG +LSG+  S + CE V+  GS APC++PTVRPWY   +  K  +      AV         +T P   A  N       + VY+                  DS ST GNLLGV+G+DV+LEQVQ SVE INFL TGYSILATAD GIVLA  VW   D   T    E        +DGD W DLLA+ +NGG+K FTS ST   +E+ ILVAAPV+  F T  SGG G VTHY LS VP++EIFEPV  M  LI  S +QII TTAIVA  T++AVA +VYFL+GSITRPIVKMT+AARSIA DGAK DVFGSV  +WG            C     TP         + ++RT  LDYLLCRGDDEISTL +EF  MITGLGRRGSAA  T  +   +GYP NP+    V RPPPT P +S
Sbjct:    9 DKAKSEARDSLENQIKRHLTIASEESATAIREWFRNLQYGVLDVTTFALRDARQEKRPSIDTLLPAKGPTFHVIRRREPQDLVLDSGNEGYPLNLAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEDEMTTITQTARLDLLWPTVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYAVESGLKGPKAIYANLAVDGGVNKKTALTAPRRIAPIN--CENFEKPVYTQASSKEQGFEADVHKFSNDSDSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAGVW---DRDGTEKAPEGKGRTLGDSDGDEWVDLLAEIENGGIKRFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADLIRDSTVQIIVTTAIVACFTMVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVTATWGARRDSARDSARGCGTDISTP-------GRFTVNRTACLDYLLCRGDDEISTLGREFQLMITGLGRRGSAAEATGLMDKRTGYPKNPYAAMIVKRPPPTGPSAS 609
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A6H5JHX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX1_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.160e-134
Identity = 240/430 (55.81%), Postives = 281/430 (65.35%), Query Frame = 2 
Query:  539 YYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPW---YTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKS----------------FMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWGHFCYDTPFFLDIFSSLYRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAA 1771
            Y AD+ES TV VP DE + I Q+ARLDLLWP +YI S +TK  +VG+E + + R +R FPG +LSG+  S + CE V+  GS APC++PTV PW   Y  A     D  T L  A++TDP+ G+ ++DWLV LARAVYS        LLGV+G+DV+L Q+Q SVE INFL TGYSILATADEG+VLA   W         TVC+L IGI S  DGDGW DL ADT+NG VK+FTS     S E  ILVAAPV+ TFDT  SGG G V HY LS VP++EIFEPV  MM LI  S                 +QII  TAIVA CTL+AVA AVYFL+GSITRPIVKMT AARS   DGA+HDVFGSVA   G              S+      + LDYLLCRGDDEISTL +EF  MITGLG+RGSAA
Sbjct:    8 YNADAESNTVEVPEDEMAAITQTARLDLLWPAVYITSYETKGAYVGVELSTTGRTYRYFPGTDLSGVKGSRFACEYVEVDGSIAPCFDPTVPPWERWYETAEDPDYDSETFLAPAIITDPFKGSIDDDWLVALARAVYS--------LLGVVGMDVRLGQLQESVEAINFLDTGYSILATADEGVVLAAAEWDEDASQEALTVCDLRIGISSGRDGDGWTDLKADTENGEVKSFTSSPPTASTE-WILVAAPVEGTFDTAISGGAGTVAHYILSAVPRNEIFEPVVGMMGLIWDSTIQEFHVHLLSLFSSLHVQIIIPTAIVACCTLVAVALAVYFLAGSITRPIVKMTKAARSTTADGAEHDVFGSVAADRGIKK----------DSVRGAGGARFLDYLLCRGDDEISTLGREFQLMITGLGKRGSAA 418
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A3M1VNS1_9EURY (HAMP domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1VNS1_9EURY)

HSP 1 Score: 90.1 bits (222), Expect = 2.130e-15
Identity = 134/563 (23.80%), Postives = 227/563 (40.32%), Query Frame = 2 
Query:  128 LRKQLLLSFLTLAAVSLLLXXXXXXXXXXXXXETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALRDALQEDLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDLSRSTWYYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATA---TVCELGIGICSSNDGDGWRDL-LADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKS--------FMQIIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDVFGSVADSWGHFCYDTPFFLDIFSSLYRIDRTKALDYLLCRGDDEISTLAKEFSDMITGLGRRGSAAGTK 1780
            +R Q+++SF+ ++ +S+ L                   + ++L++QI  ++  +S E A  I  +FR  +  V  +   A  +      NL G  + Y          D+E  +S      D   Q+  +  + ST+YY  +      + AD   TI +SA LDL++  ++  + +   ++V      S  VFR FPGG              VD        YNP +  WY +A         Q R AVV  P         +V+L +AVY +     GNL+GV+G+D K+  +++ V ++N L  GY+ L   ++  +LA   W   +        T+ +    I      DG   L + + Q    KT  ++    + E  IL  + +      TA G      + F  +V  +E+   V  +   +++         F+  IF T  + G  L        +LS ++T+PI K+T AA+ I  +  K D+F +V                             LD  + + DDEI  L + F++M+  L       G K
Sbjct:    8 IRTQIIVSFVLISIISMSLVSGMAYMNLTRIGNETIDISSENLKNQIITNIQKSSNENAEIIEAKFRNAEAAVAKIVK-ATEELFDPSSNL-GSIKSY---------HDSETNSSLPDHGYDNTYQEI-ISNTTSTYYYPGNR-----LTADMNQTIQRSAYLDLVFRPIHEQNREYVWLYVAF----SNGVFRNFPGG-------------FVDLKRE----YNPPLEDWYIEAV--------QARGAVVYSPPYFDITQGLVVSLTQAVYVE-----GNLIGVVGLDFKITTIRDKVLKVNILDQGYASLFQKEDFTLLAHPEWDAENHDINQELPTINDFETNI------DGSPALSIENLQELKNKTNGTIEFEKNGEGFILTFSQIS-----TAQGP----LYDFAVVVKVAEVLASVARIQNDMNQKQSSLQRNLFLFFIFITLAILGVGL--------YLSNAVTKPIGKLTQAAKQITLNATKEDLFENVV----------------------------LDETIVQ-DDEIGDLTRSFAEMVEHLRAENKKKGKK 467
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A1K2H5E8_9BURK (Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Chitinimonas taiwanensis DSM 18899 TaxID=1121279 RepID=A0A1K2H5E8_9BURK)

HSP 1 Score: 68.2 bits (165), Expect = 3.010e-8
Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 2 
Query:  728 LSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSN-DGDGWRDLLADTQNGGVKTFTS 1237
             +G AD        D    PA  Y+PT RPWY KA+        +LR+ V+TDPY  ++     VT A  +        GNL GV+G D+ L++V   V+ I     GY+ +AT D  IV        A D A   V E+  G+ +S    D   ++L + + GG   F +
Sbjct:   94 FAGYADKRMLYNLADKK--PADGYDPTARPWYKKAS--------ELRKPVLTDPYISSSTKKLAVTFASPILEG-----GNLAGVVGGDISLDEVLAVVKGIQLRAEGYAFVATRDGKIVAH-----PAADSALKPVGEVMPGLDASLLSADASGEVLREVEIGGQAKFVT 244
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: U5CRH7_CALSX (Methyl-accepting chemotaxis protein n=3 Tax=Caldanaerobacter subterraneus TaxID=911092 RepID=U5CRH7_CALSX)

HSP 1 Score: 64.7 bits (156), Expect = 2.600e-7
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 2 
Query:  797 YNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVL 1090
            Y+PT RPWY  A  AK        E V T PY   A     +T+A+AV+  SG    NL GV+G+D+ LEQ+  ++  IN   TGY  + T D  +++
Sbjct:  154 YDPTERPWYKDAVNAK-------GEPVWTKPYQDFATKLPEITVAKAVFDSSG----NLKGVVGIDITLEQLSKNIASINIGKTGYLYILTKDGTVIV 240
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A6I7QRB5_9SPIO (Histidine kinase n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6I7QRB5_9SPIO)

HSP 1 Score: 64.3 bits (155), Expect = 4.680e-7
Identity = 68/240 (28.33%), Postives = 105/240 (43.75%), Query Frame = 2 
Query:  719 GGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDGATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSILVAAPVKATFDTTASGGEGNVTHYFLSIV---------PKSEIFEPVDTMMKLIHK 1411
            G E   + +  Y    VD +   AP Y+P VRPWY  A AA            VTDPY  A+ +D+ +T    VY       G  +GV+G+D+ L+ +QN VEE   ++ G  +L     G  +  +   TA     A++ E+     S  +  G    +AD+  GGV  F S   N   +  I V  P+     +T +G   +V  YF  ++             + EPV+ M++ I +
Sbjct:  113 GTENGNMYEWGYGEGFVDNAPVFAPGYDPRVRPWYRDALAAD--------GFAVTDPYLYASIDDYGITCVLPVYHPES---GERVGVLGLDIMLDALQNLVEEFE-ISMGGKVLLVDRSGSPIVDQFSSTAGGELRASIREV-----SGQELPG--RFMADS--GGVPHFFSYKKNPVTDWMIFVGLPLPEIMASTYAGIRLSVALYFFLMILLLITLEWSVGRMVIEPVEKMVQTIDR 331
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BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Match: A0A7C7RYC4_9CHLR (HAMP domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7RYC4_9CHLR)

HSP 1 Score: 63.9 bits (154), Expect = 5.060e-7
Identity = 51/166 (30.72%), Postives = 73/166 (43.98%), Query Frame = 2 
Query:  572 VPADEQ--STINQSARLDLLWPTMYINSNDTKAIFVGMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWYTKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNLLGVIGVDVKLEQVQNSVEEINFLTTGYSIL 1063
            V  DE+    +  SA ++L+ P +Y +  +T A+++     A   V   +P   L  I                 P +  T RPWY  A  A    N   R  V +  YA A     +VT A  VY+D G  VG    V+G+DV L+ +  S+EE   L +GYS L
Sbjct:  142 VEIDEELLEVLEMSAHMNLILPPVYDSDPNTVAVYLA----AKQEVTCYYPNINLGAIVP---------------PDFQVTQRPWYVGAAPA----NNPERRVVWSPVYADATGKGLMVTAAAPVYTDRGEFVG----VVGIDVTLQDISASIEENRLLGSGYSFL 280
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.123.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LT17_ECTSI3.910e-23962.48Methyl-accepting chemotaxis protein n=1 Tax=Ectoca... [more]
A0A6H5KHM1_9PHAE4.080e-23362.33HAMP domain-containing protein n=2 Tax=Ectocarpus ... [more]
D8LT16_ECTSI5.390e-23261.99HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHM8_9PHAE4.890e-17753.09HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JHX1_9PHAE1.160e-13455.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M1VNS1_9EURY2.130e-1523.80HAMP domain-containing protein n=1 Tax=Euryarchaeo... [more]
A0A1K2H5E8_9BURK3.010e-832.16Methyl-accepting chemotaxis sensory transducer wit... [more]
U5CRH7_CALSX2.600e-738.78Methyl-accepting chemotaxis protein n=3 Tax=Caldan... [more]
A0A6I7QRB5_9SPIO4.680e-728.33Histidine kinase n=1 Tax=Spirochaetaceae bacterium... [more]
A0A7C7RYC4_9CHLR5.060e-730.72HAMP domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:532868..544055 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog273068.TTE2231
Preferred namemcpC3
PFAMsHAMP,MCPsignal,dCache_1,sCache_2
Model size1882
Max annot lvl186801|Clostridia
KEGG koko:K03406
KEGG Pathwayko02020,ko02030,map02020,map02030
Hectar predicted targeting categorysignal peptide
Exons11
Evalue7.82e-08
EggNOG OGsCOG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,247S3@186801|Clostridia,42FW1@68295|Thermoanaerobacterales
Descriptionhistidine kinase HAMP region domain protein
Cds size1809
COG categoryNT
BRITEko00000,ko00001,ko02035
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.123.6prot_P-littoralis_Contig78.123.6Pylaiella littoralis U1_48polypeptideP-littoralis_Contig78 532868..543982 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791607.1867573-CDS-P-littoralis_Contig78:532867..5331481680791607.1867573-CDS-P-littoralis_Contig78:532867..533148Pylaiella littoralis U1_48CDSP-littoralis_Contig78 532868..533148 -
1680791607.2009413-CDS-P-littoralis_Contig78:533250..5334281680791607.2009413-CDS-P-littoralis_Contig78:533250..533428Pylaiella littoralis U1_48CDSP-littoralis_Contig78 533251..533428 -
1680791607.2137768-CDS-P-littoralis_Contig78:533621..5337851680791607.2137768-CDS-P-littoralis_Contig78:533621..533785Pylaiella littoralis U1_48CDSP-littoralis_Contig78 533622..533785 -
1680791607.2231686-CDS-P-littoralis_Contig78:534439..5345631680791607.2231686-CDS-P-littoralis_Contig78:534439..534563Pylaiella littoralis U1_48CDSP-littoralis_Contig78 534440..534563 -
1680791607.2371023-CDS-P-littoralis_Contig78:535357..5355471680791607.2371023-CDS-P-littoralis_Contig78:535357..535547Pylaiella littoralis U1_48CDSP-littoralis_Contig78 535358..535547 -
1680791607.256906-CDS-P-littoralis_Contig78:535861..5359871680791607.256906-CDS-P-littoralis_Contig78:535861..535987Pylaiella littoralis U1_48CDSP-littoralis_Contig78 535862..535987 -
1680791607.2714005-CDS-P-littoralis_Contig78:537976..5380951680791607.2714005-CDS-P-littoralis_Contig78:537976..538095Pylaiella littoralis U1_48CDSP-littoralis_Contig78 537977..538095 -
1680791607.2842631-CDS-P-littoralis_Contig78:538740..5389031680791607.2842631-CDS-P-littoralis_Contig78:538740..538903Pylaiella littoralis U1_48CDSP-littoralis_Contig78 538741..538903 -
1680791607.2990444-CDS-P-littoralis_Contig78:539140..5392891680791607.2990444-CDS-P-littoralis_Contig78:539140..539289Pylaiella littoralis U1_48CDSP-littoralis_Contig78 539141..539289 -
1680791607.3099895-CDS-P-littoralis_Contig78:540231..5404501680791607.3099895-CDS-P-littoralis_Contig78:540231..540450Pylaiella littoralis U1_48CDSP-littoralis_Contig78 540232..540450 -
1680791607.3247952-CDS-P-littoralis_Contig78:543886..5439821680791607.3247952-CDS-P-littoralis_Contig78:543886..543982Pylaiella littoralis U1_48CDSP-littoralis_Contig78 543887..543982 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791607.3395772-UTR-P-littoralis_Contig78:543982..5440551680791607.3395772-UTR-P-littoralis_Contig78:543982..544055Pylaiella littoralis U1_48UTRP-littoralis_Contig78 543983..544055 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig78.123.6

>prot_P-littoralis_Contig78.123.6 ID=prot_P-littoralis_Contig78.123.6|Name=mRNA_P-littoralis_Contig78.123.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=603bp
MPFRAVTLCKPCLNKKRPLRKQLLLSFLTLAAVSLLLAVKVVLGTTAVIG
ETAKSKARKSLEDQITRHLTNASVEAAATIGERFRKLQYGVLDVSAFALR
DALQEDLNLDGGGEGYPLTPAHIDLRDTEITASTEATLVDFDRQDYPVDL
SRSTWYYADSESFTVAVPADEQSTINQSARLDLLWPTMYINSNDTKAIFV
GMEFTASTRVFRQFPGGELSGIADSAYKCEAVDASGSPAPCYNPTVRPWY
TKATAAKMDQNTQLREAVVTDPYAGAAENDWLVTLARAVYSDSGSTVGNL
LGVIGVDVKLEQVQNSVEEINFLTTGYSILATADEGIVLAGRVWGTADDG
ATATVCELGIGICSSNDGDGWRDLLADTQNGGVKTFTSLSTNNSNEDSIL
VAAPVKATFDTTASGGEGNVTHYFLSIVPKSEIFEPVDTMMKLIHKSFMQ
IIFTTAIVAGCTLLAVAAAVYFLSGSITRPIVKMTAAARSIAEDGAKHDV
FGSVADSWGHFCYDTPFFLDIFSSLYRIDRTKALDYLLCRGDDEISTLAK
EFSDMITGLGRRGSAAGTKSLTGGSGYPDNPFTVKFVRPPPTAPFSSITE
EY*
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mRNA from alignment at P-littoralis_Contig78:532868..544055-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig78.123.6 ID=mRNA_P-littoralis_Contig78.123.6|Name=mRNA_P-littoralis_Contig78.123.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=11188bp|location=Sequence derived from alignment at P-littoralis_Contig78:532868..544055- (Pylaiella littoralis U1_48)
ACACAGCTGACTTCTACTTGCAGTTTCATCGCCTCCCTCCTGTGACGAGC
AAGACACCCGCCAGAAGAGAAGTATGCCGTTCCGTGCAGTAACGCTGTGC
AAGCCATGCCTCAACAAGAAGCGCCCATTGCGAAAGCAGCTCTTGCTTAG
CTTCTTGACATTAGCGGCGGTGAGTTTCAACTTTGCAACAATTTGTCTCG
TTGAACCTGGCTAAAAAACGCGGCGAGAGACAGAGGAATGATTTGACCGC
TTGACAGCAAGCCTACATCCTCTGGTTTTACACGAGCAGCACAAGCAGTA
CCAGCACTAGCAGCAGTGGTTTTCTGAAGTACGATGCAAGGCCTAACCCC
TTTGCTGCCGTCAACCGATCAAATCAAGCGTGAAACGCACGTGGCGGTCG
TGCCTAATTTATGCGGCGGGATTAGAATACGTAGACTACAGTACCGGCCC
GCTAATAAGAAACCAGTAAATCTGGCTCAGGCTGACTTCTTATGTTGGCT
TGAAAGTCGAGCATGACACTTTCTTATGTATTGTATAGGATTGAGTGTAG
CACTCGCCGCCCAGGCTGGACGCTTTCTTCATCTTCTGAAAATGTCAGGC
TGACTTTCTTCAAAGGAGCTTTCTTATTAGCGGGCCGGTACTGTATGTAA
TTTCGAGGTGGCCGCCGTGTCCGAGATCGCCAGGTAGGCGGGTGCTTGAG
ACACCAGGTCCGTCTAGAGGCAGGGAGTCAATATGCTATGTCCTCAAACT
AGCGAAAACATCTTGTATTGAATGCTGTTGCGATTTTTGGGGTCGCTGGT
TTTCCAAATAACATCGTAGTGCTTCTTCTCCTCTTTCAAACAACCTGAAA
TTCGACCGCAAATGGAAAGTGAGGCCAAGGAAATATTTTGGGTTCCGTGT
GAGAGGGTCGGCGCTTGCTGTTGTATTGGATCCTTCTCGTCGACGCTTCG
TACTCAAAGTGTGATATACGTACGCTTACCAACATTAACTCTCAACGCTT
ATCCACTTGAAAGGAACCACTGACGAGGGCTGTGAAAAATTTGTTACCCA
ATAATCTTATGTAGGATCCAGAGGATAGATTTCAGTCGTTAATCAAGTCA
AAAGTTCCTAATCGGCTTAACCTCTCACTCTGTCAGCTGTGCAAGGAGTA
TTCCCTGAAGTACTTCTATCAATAGAGGACACCATGGAACAGCCATGTGT
ATGTCAGCAGGCTCAGGCATGCTGCTGGGGCTGAGATATTGAAGGCTGCA
GCAAAAACTCAAAAAGTGCGCAAACTGGGCCTGAACTGGACCGACGCCAA
ACGTTTGTCACTGCTGTGCTCGCCGCCGTGGACCCCAGCCACCTGAACTG
CAGGTCATCCGAGACAGCTAGAGGCACTAGCTATTGCTGTAGACCCGCAG
TTCAGGTTGTTGGGGTCTGTGGCGGCGAGTACAGCAGTGGCAAGCTTCTG
TTGTCGGTCCAGTTCGGCCACCGTTTGCGGACTTTTTGAGCCACTGCTGC
AGCCTTCGATATCTCGGCCCCAGCAGCATGTCTGAACTTGCCGACAAGCA
CGTAGCTGCTCCATGGTATTATCTACTAATTAAAATCTTCAGGGAATACT
CCTAGCACAACTGAGCTTCTTAGAGCCTGACCAAAACAAGCTATTTTGAC
TTGATTTTAGAGTTGTTGAAAACTTTTCTTGAAATTTAATAAGAGATTGG
AGGTAGACATATGACAGGCATGTACAGAGAAGCCCCTGCCGCCGCTGGGT
GCGATCACCACCACTTTTTCTCTTTCCCGATGCCATCCTATTGGTGTGAG
GTACCCAGTGTGTGATTGTCAGGGGCCCTTCGCTCTTTTTCACAATCTAT
GCCTGTCAACATTCTATCGTCCCTGGAGCCTTAAAGGCGCCCTTGTTAGC
TCCGACGTGACACTTCAAGACCCCTTCAGAACTTCGCTAGCGTGGACCAC
CTCGCCGCAAAAGCTGTTTGAGTAGCTCCAAGCTGCGTGCAGGCCTCTCG
CTAACTCTGGAGGGAATACCCGCCGAGCCGCCCTGGTCCTGTGAGCTTTC
AAACGCGCATGGCGTCTACCGAAATACCCGGAACGTCGTGATGGAAATCT
CTTCGGGTCTGTCTGGCCGCCCCCGGGGTGTGTGTGTGCCATCCCATTTG
TTCTGGGCAGCAGTCTACACCTTTCGGTTTGATGCGGGTCCTTCAGCCGG
GGTCACACGGGAGGAAGGTCACACACGAGCTTTTTCATTTTTTATTTTGT
TGTACTGCCTGCACCTTTCCTCCTGCGGTACTTGCCTTTTGGTTTTTACT
GCGAATCGGGTACAGCAATCCCTTCCCTCTGTTTACTCACGAGTGAATCG
CTTTCCACTGTAAAGTTGCGTGAAAACACTTTCAGAGGAATCGAACCTGC
ATCCTTACTTCTAGTAGGTTGACGTTGGATCCCTAGACCACCGGGGCGAC
CGGTGTGTGTGTGTGTGTACTGATAAAAAAAAAACAGACCAACACGTTTC
ACACGTACAACGACCACGCAGCAGATTGTATTAATGTCGCAACCAAGTAG
CGTCGATAGGGCACTCGCACCAAAAACGGGCCAAAAAATACACCTGTTTG
CTTCGGAAGAGTGTATTTTTTTACAGTCAGGTGATTTACCAGACTCTCTC
AACCCCGGGCGTGTACTCCAACACGATGAAATGACAACAAACAAGGGGTG
GGACGGTTACCGCATACAGGCGTGTTACGCTGTACGGTGTTTGTTTATGT
ACGAGTGCCCCGGCTTTTGCATGTTATGATTTAAAACATCACCCTTGGGC
GCTCACCCCACCGGGGCCGTTCGTTTTTATTTATCCTGCTACCTACGTCG
TCATTCAGCAACCATCCCAGCCTTCCCATCTCGATGCTGGGGCTCATGTG
TATGCTCACTCTTCTTTTTAGAAGCCGAGGCTTATCCAAAGGCAAATACG
GATGTGCTTCTGAGAACATCACATCATCGAAAATGTACTACTGTTCGTAC
TCGGAGAATATAATTGGTCGCAAGATGCTTGTCTTTTTGCATGGGATAGC
ATCTGACGTAACCACATACCCTGCTGGACCTGCGGTGGCCGTGACAACGT
TGGAGGGCACGTCGGAGGTCGTCGACGCTATACTTCTCTTGACTGCCGAA
ACGTTTAGCCGAAACCCTTCGCCCGGGGCTGAGTCGAAACATCCTGTACA
TGTGCAACGTATGTATGTTGATCGCCTGCCGGGTCGTCGCCTGCCGGGTA
ATTTTCATTCTCAACTCGACCTTCAACATTCTGCAACAAGTGTGACTGCT
GTGGTTCAGAAAAGGGGGGCGAAACCTGCGCGGGGGGGAATGACGGTTAT
AGACAATCAGCCCCCCGATGAAATTTGAAGTGCTTGGGAACGGAGCCCAT
TGTTTATCCAACAAATGGGGGTTGGAATCATGAGCGCGACGAGAGCGCCT
CGCGGTAAAATCTGACGACCTTGCCTCGGCCAACTCACGGCATGTAGAAC
CCATCTTGCAGTGTCTTGGCGCTTGTCAACCCTTATCCCTTCTCCACTAC
TCTGTGTCGCACGCGACATCAACGACAACGACAACAACAACAACAACAAC
AACAGGTGAGCCTGTTGTTGGCCGTAAAGGTGGTCCTGGGTACCACGGCC
GTCATCGGTGAGACGGCAAAGTCCAAAGCCCGTAAAAGCCTGGAGGACCA
GATCACGAGACATCTCACGAACGCCAGCGTGGAGGCCGCCGCCACTATCG
GAGAGAGATTCCGGAAGCTGCAGTACGGGGTGCTTGACGTCTCGGCCTTC
GCACTGAGAGACGCTCTTCAAGAGGTAGGCTAAATCGCAGTTTGCATCCA
TCCACACTCCACGCCCCCTCTACAACGTGTCAGCTAACTCGTGCGCCACC
CCCCACGTAATCATATTTGATTATGCCGCTTTCGCGCTTGTGTAGCCCCA
AAAATATATTTATTTCTATCACACATGTAATGATTCGTTCATCATTGCTG
TATTCATAGTGGTGGTTTTCGAAGCTCCCAAGCTGAGGTAAAGTAGCTTC
ATCTGCGAGCTGGCTCAGGTAGTGACGCGCAGGCCGCACGTCCGGTATTC
TACGGGAGTCTCGATAATACATCAGTCTGAGGGCAAAGCTGAAAGGTAAC
GGCCTCATCTGCAGTTTCCGTTTGCACCGCCCTTTTTTGTATCGTAGTCT
ACAGTGGTCTTCGGGTGCCGTACTCAACAACTCGCGACGTGCCTCGACTG
AAGATCTTTTGGCCCACTTTTCAAAAATAGTTTTGCCCTGCGTTCGACTT
CTGTCGGAATGGCCAGGAGAGCTCTCTTTGTCGTTGGTATTTGCGTGGTA
CAACATTCAGGGGTGTTCCAAGCAGCGGCCTCCATGCACTTACAGGGAAT
CGTTCGAAAGATTCGTTTCTCCTGCCATGGTTTACCCATTTTTGAAATGC
CCTTCTTCTCTTGCCCCCCCCCCGTTACCGGCTCGGATCAAGAAATACCC
TGATTCATGTGTTCCCTGTACCCCACCCTTCATTTTCACCCGGCCCCCCA
CAACCCGTCACTTGCACAGCTCGTTCAACGCTTTGTCTGCCGACCGCTTT
CTTCGTGGTCTGCTTGGCTGCATGTAGTACGTGGAATGACGAGCTGAACA
CCGGGAAACATCAGCAACAAGACCCATGAACATGAAGGTGGGGTATTCGA
CACGGCACATTTCCCTATTCCCTTATTTTCCTGAACATGTGCTTTATTGA
CGAATTAATCGATCAGGACCTTAATCTCGACGGCGGCGGGGAGGGATACC
CGCTCACACCGGCCCACATCGACCTCCGCGATACCGAGATCACCGCAAGC
ACCGAGGCGACCTTGGTGGACTTCGACCGCCAGGATTATCCCGTGGACCT
CTCCCGCAGCACCTGGTGAGTTCATTAAATTTGGCTTGGCGATGCGTGTT
GGACTGTTCATAATCTTCCTAAACAAATGCAGAATTAAAGTAGGAACGAA
AACCATAACGCGGCGACCAAGATTAAAACCACTCTCTTGAGGAGTTCCTG
TTCCTCTCGAACGATAGTTGCCTGGGTGCAAAATTTCAAGTTCACCCCAT
CATCAGGCAACGTGTTCGGTGCGCCGCGACCCGACGCCCCTCCCCTGCTC
AGGTACTATGCCGATTCGGAAAGCTTCACGGTGGCGGTGCCTGCAGACGA
GCAGTCCACGATCAACCAGTCGGCCCGCCTGGATTTGCTGTGGCCGACCA
TGTACATCAACTCTAACGATACCAAGGCGATCTTCGTCGGAATGGAGTTC
ACCGCCAGCACCCGGGTAGGTTCCCCGTGCCACATGCTCCCAAACGTTTT
TCCGTTCGCGCCCACCACAGGCAAAGCGGTAACGTAGACAAGAGCAGAGA
CAGCAGTTTCGTTTTTATTTTGATACACACTCAAGTTGTGCTTGCTGAAG
GTGTAAGGAACGCCCGTTGTGTTTCAGTCAGTCTTCAGCGCTGTCAACCG
TTTTGAGGTTCAAGTAGGAAACTGTGCGTGCAGTGTGTCATTGAGCATCT
GGTGGGCCGTTTATTTTCTTAGACTCATATCACTAGCTAGAAACGTCCGA
CAAAACGTTCTCTCCGCTCTTTCCCATGGGACGCGACGGTGTTGGTGAAG
GGGCAAAAGCGGTTATCTTTCTATGAGTCTGGCCCCCTGTTTTTTTTCGT
GGATAATTGTTTTTTGTGCCTTTGCTTCAAAACCTACTGATGCTGAAACG
TGCTTTTCGTTATTTTTCTGCGTTCTCATCGTAAATTTGATACTACACCC
TGGTGCGTATTTATATATCACGATGTCCAGTGCTTGCAACAAACGAATAC
TCCGACGGCTCATTAGAAAGCTCTGCTTCTTTTTGTGAAAACAGGAGAAA
ATTGACGCGTCGTGTTCATCGGCCGGCCTGACGCGCAATGTTTGTTGCTT
GGTATGATAGGTTTTCAGGCAATTCCCAGGGGGCGAACTCAGCGGAATTG
CCGATTCTGCGTACAAGTGCGAGGCCGTGGACGCAAGCGGGTCGCCCGCC
CCCTGCTACAACCCCACCGTACGCCCCTGGTGCGATTGGATTGATCATGC
CTCACTAAATGTTTGTTGTAACCAACGAATCATGCCGGTGTTTCACACAT
ACAGTGCCGGAGGGATGCTGCGATTGTTGCTGTCTGCTCTCACCCCTGGC
CTATTTTGCGACTTCTTGCGTTCACTATACATCTGCCATAATCACGATCC
GATCGAGCGTGCAGCTGAGTAGAAGTGGTGATATATTTTCGTTTGAGGGT
TTCCACTGTTCGTTTGAAAACATTTTTTTAACAATGGTCTCGCGGCAGTT
CTGTGTCATGTCCCAGCCTATTTCTTGTGCGTGGGACCTAACAATATCGA
GCGCGGTCGAAACATATACTCGGAGTACTTCGAAGTATATTTTTTCGTAG
TTTTTTTTCAGCTGTTTTTTACCGGGCTTTAACCATGAATCAGTACGATT
CAGTTCATCGCTGACAACACGAACCAATCAGAAAGAGGGCAGGCCGTCGA
GGCCCCTCTGCTGCTCTTTTCCCACATGGACCATTCCACCGGAACGAGCG
AGGCTACAGGCTGGTTCACGCAAGAAACCCAAAATTTATTCAACGCATGT
TCCCGAACGCAATAAAGCCCCGATGACAACAAATATGGTACCAAGCTGAC
CGCCGTCAATAGAGGAAGACCGTGACATTCTCGGATTTTTGTTTGAGGCA
CTACCGGTGGCGCAAGGGGAGAAAATGTGTCATTTCACGGAATGACGTGG
TATAACACCCCCCCCAAGGTCAGGCTCTCTACACTAAGTGCTATATATTT
AATTCGAGATATACTCTTTTTTGTAACACGTATGGTCTCTCTGTGTCCTA
AGGAGGACATTTGCGGTTTTATTTTTCGAAATTCCAAAAAAAACTGACGT
AATTTATCTAATAATAGCATTCAAGTTCTGAACAAGGGCCGAATCCACAC
TTTATCCAAGTATAGTTTGGGATTTGAGGGACCTTGACTACACTGAAGTG
CGATTTCTCAATGAAAAAAAACGAGTCCTTGAACACAGGTGGTATCAGTG
GAACACAAGGAAGGTGCCCACAAAAAAGGTAATTGAAAAAACTCTTTAAA
TTGACGTAGTTTTTGGCCAATAATAGCGTAAAAACTCTTGAAATCGGCCG
ATTCCATTCTTTATCCTAGTAACTTGGGTGTTTTTTAGTACTTGGCCACA
GTGAAGTGCGTTTTTTCACGCGGTTTTTTCGAGTTAAGACGTTGAAACTT
TGTACACATGTTCGTTAGGTCACTGCGAAATATCGGACGACCGGGGTGAT
TCGTTTTTTTTCACCGGATTTCTGGGGCCCTAGCCGACCAATGCAGACAA
AAAAAAACTCTATACTAATATGATTATTGAAAAAATAAAAATCGAATCAC
CTCGGTCTTCCGATTTTTCGCAGTGACTCAACAAACATGTGTGCAAAGTT
TCAGGGTCTACCTCGAAAAAACCGCGTGAGAAAACGATGTCGAATACATT
TGTATCTTCTTGCGTGAACCAGCCTGTATTGTTCTGTTTGTTCGTACAGA
TATTTGAGAGACACACGTTTTTTTTACCTGCTCATTTCTGCTCCTTTTTA
TGACACCGAAACTGCAGTTCGTTCCACTCTCGGGGGGTTTCATGACAAAA
AAGGCGGAGCGTGGTCAGCGGAGGTTTCCTGTGTATTTACTCACGCACTG
TGTTGTGATATGCTTTATATACGGTAGAATTTTCTTTCTTTTTTTTGTAT
ATTAGCACGCCTTGTACGCCCGGCGACGGGATTTCGGGATGAGCAAGCTC
AACTCGGGACCTGGTAGTCGGAAAACTATTGCTCACTCCTAGAATGAGCA
GGAGTCTCCCTTGGTATTAAACCGAGAGCGGGCTCGTGCACATTGAATAA
CAACAACAACAACAAAAAGCAACACAAGAACAAAAGCAACAGCAAGAACG
ACAACAGCGGCAACAACAGAGTCAACAACAACCGCAGCAGAAATACTTTC
TTCACCTTCATCATGCAGGTACACGAAGGCCACGGCTGCCAAAATGGACC
AGAACACGCAGCTCCGGGAGGCGGTCGTCACCGATCCCTACGCCGGCGCG
GCAGAGAACGACTGGCTGGTCACCCTCGCGCGCGCGGTGTACAGGTGTGG
AAAAACAAAGACTACGGCCAACCCATCATTCCTTGAATCACTATACTGAG
CATCGCTTCGATGAGGTGAAACAACTGCCTCGGCGTCGAGTGGTTTGACA
TAGAGACATAAATGTATTGTGTGATACGTACTTATTTGGCCTGTGACATT
GATTGGTTGGATGCAAAGTTTATCCTTCAGCTTCATGAAATTTACGGTCG
TGCTATTTTGGTATCCAGGTACGTCAAAAAGTTGCTTCTCGTTTTTAATT
ACATATTCGAAATTTCCTGACAGCCATGTCGTAATTCTTTATTATCGTAT
ACTGGCAGCGACTCGGGATCAACGGTGGGAAACCTGCTAGGTGTGATCGG
TGTGGACGTGAAGCTGGAGCAGGTGCAGAACTCGGTCGAGGAGATCAACT
TTTTGACCACCGGCTACTCCATCCTGGCGACGGCTGACGAAGGGATCGTG
CTAGCGGGTCGGGTCTGGGGCACTGCGGATGACGGCGCAACGGCAACGGT
GCGCGTGTGCTTCGTTCAATGTCGCTCATACTTGTGATGTGTGTGAGTGT
GGGTGTGTGTGCTTGTGTGCTTGTGTGCTAGAAGAGAAGATGAATGGGAG
GGGGCGGGGTGGGGCGTGGGCGGGGGAGGACAAGGGAGCAGTGCGTTGTC
AAATGCCTTATGTTCTCCGGGGAGATCCTGTTCAAAAGCGCAACACTTGT
AATCCCGAGGTGACCCGTCGTCAAAATCGCGTCAAATTCGAGGAAACAAG
TTGTACAATGTAAGATATGAGGAGCGGTTGCCGGTGACATATGTGAAATG
GGCGTTTTGCATAGTAACACGAAACAGCAACGGTAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGACATTGATAACCCAGTGGCTTTGAATGCA
AAACTTATATTGCACACCAAGTGCATCATCCCCTTGGAGATGAAAAGACA
TCAAGCCTGATCGTGGGCAAATATACACATGGCCAGATCATCCACTCTCC
GTCTCATACGCTGTGCCTCGTTTACCATGTATCGACGACACAGGCTTTGT
GGCACCCGAACAGTCGAAATATCAAATCATGTTCCCTATCATGTCGATTA
CACGATCTATTGTCAGCCAAGTTTGTGGCACACCAAAAGAGGAACTACGT
CGACATGACATTATTGTCTACCGTCGTGGCGAAGGGTGTGGAACAAAAGT
ACTGACATCGCGGCTACTGCTGCTGCTGCTTGTTACTCCTGGAAAAATCG
TACAAAACGAACAATGCGAAACAAAACAACACAAACTATCAGGTGTGCGA
ACTCGGGATTGGCATCTGCTCCAGCAACGACGGCGACGGATGGAGGGATC
TCCTCGCGGACACGCAAAACGGGGGCGTGAAGACCTTTACTTCTTTGTCC
ACCAACAACTCCAACGGTAAAAGCATGTAACGCGATGCGCGTTTCCCTTT
CTGTCAAGTGCTCCACTTATTCCCTGCGTTGTACACTAGGTACGCATGTA
TGCAGTAGGTTCACTCTAGACTGCTTTCACATTTAGACAAAAATGATGTC
ATATTATCCAAGGCCCTGGCTTTGGTATTGCCCTTCTTCAGACGGCTTGC
ATGAAAGGAAGACCGAGTTGGGGGAAATGTGCATCACGCCTGTTGAATGG
CATCACAGTTTTTGGATATAGGCGTATCATTCTCAAAACGCTTGGCTTGT
TGGCAGGATCTGCGGTGTCAAAGCTTTTTACCCCGATACCCTGTGATTCT
TGATACTGGGGTGAGTTCGCGCGAGGATATGGGGGGGATGTGGCATATAC
TCTTGACCCGTGTCCCAAGAGCTGCCCGATCGATGCAGGCTGGACACTGA
TTGTTGTGATTTTTCCTGCGGTGGTTTTTCTTCGTGTCGTCCTTCCGTTT
CATGCTGAAAACACGCGCCTTCGTGACTCTCTTCGCCAAATTCATCCGGC
GGTGGTTGATTCCAGTGTATTGACCCTTTCTCAACTTACGGCTTGATTCA
TGCTGTCTGATGCGTTCAAACGGAATCAACATCTTGCGTGTGGTGTTTCC
CCTTTCACCAGGCGATACAGAGGACTCTATCCTCGTCGCCGCTCCCGTAA
AGGCGACCTTCGACACCACCGCCTCCGGCGGCGAGGGTAACGTGACCCAC
TACTTCCTGAGTATCGTTCCGAAGAGCGAAATCTTCGAACCGGTGGACAC
AATGATGAAGCTTATTCACAAAAGCTTCATGCAGGTGGGTCGATCAGAGA
GATGCAATTACTACTCTCGGTACATTTGCAACAAAATCAGGTAGTACCCA
CGCAAGGTCAGTTGAACGACGACGGCGACGAAAGCAACCTCACACACACA
ACAACCAGCCGAGCTTGAAGTTAACCTTACAGAAAGCGGCTTATTTCTCC
CGTCTCTTGTGTGCTTGCCTTTCGTAGATCATCTTCACCACCGCCATCGT
GGCCGGCTGCACTTTGCTCGCCGTGGCCGCCGCCGTGTACTTCTTATCCG
GGTCCATCACACGCCCCATCGTCAAGATGACCGCGGCAGCCCGTAGCATC
GCCGAGGACGGGGCCAAACACGACGTCTTCGGCAGCGTGGCCGACTCCTG
GGGGCGTGGGGGACAGGCCGGGGGGAGGTGAGAGAGAAAGTCACACACCC
TTAGCTAACCTCGCTGTGTGCTACGTTTTCGCCCCATCGCACTGCAGCGT
TTTCTAGATTTCTGTTATGATACACCTTTCTTCCTCGACATTTTCTCCTC
GCTCTACAGGATCGACCGCACCAAAGCCTTGGACTACCTCCTCTGCAGGG
GGGACGACGAGATCTCGACCCTCGCGAAAGAGTTTTCCGACATGATCACC
GGCCTGGGTCGGCGGGGATCGGCCGCGGGGACCAAGAGCCTGACGGGCGG
CTCGGGGTACCCAGACAACCCCTTCACCGTAAAATTCGTCAGGCCGCCCC
CGACGGCGCCGTTTTCCTCAATAACTGAGGAGTATTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig78:532868..544055-

>mRNA_P-littoralis_Contig78.123.6 ID=mRNA_P-littoralis_Contig78.123.6|Name=mRNA_P-littoralis_Contig78.123.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1809bp|location=Sequence derived from alignment at P-littoralis_Contig78:532868..544055- (Pylaiella littoralis U1_48)
ATGCCGTTCCGTGCAGTAACGCTGTGCAAGCCATGCCTCAACAAGAAGCG
CCCATTGCGAAAGCAGCTCTTGCTTAGCTTCTTGACATTAGCGGCGGTGA
GCCTGTTGTTGGCCGTAAAGGTGGTCCTGGGTACCACGGCCGTCATCGGT
GAGACGGCAAAGTCCAAAGCCCGTAAAAGCCTGGAGGACCAGATCACGAG
ACATCTCACGAACGCCAGCGTGGAGGCCGCCGCCACTATCGGAGAGAGAT
TCCGGAAGCTGCAGTACGGGGTGCTTGACGTCTCGGCCTTCGCACTGAGA
GACGCTCTTCAAGAGGACCTTAATCTCGACGGCGGCGGGGAGGGATACCC
GCTCACACCGGCCCACATCGACCTCCGCGATACCGAGATCACCGCAAGCA
CCGAGGCGACCTTGGTGGACTTCGACCGCCAGGATTATCCCGTGGACCTC
TCCCGCAGCACCTGGTACTATGCCGATTCGGAAAGCTTCACGGTGGCGGT
GCCTGCAGACGAGCAGTCCACGATCAACCAGTCGGCCCGCCTGGATTTGC
TGTGGCCGACCATGTACATCAACTCTAACGATACCAAGGCGATCTTCGTC
GGAATGGAGTTCACCGCCAGCACCCGGGTTTTCAGGCAATTCCCAGGGGG
CGAACTCAGCGGAATTGCCGATTCTGCGTACAAGTGCGAGGCCGTGGACG
CAAGCGGGTCGCCCGCCCCCTGCTACAACCCCACCGTACGCCCCTGGTAC
ACGAAGGCCACGGCTGCCAAAATGGACCAGAACACGCAGCTCCGGGAGGC
GGTCGTCACCGATCCCTACGCCGGCGCGGCAGAGAACGACTGGCTGGTCA
CCCTCGCGCGCGCGGTGTACAGCGACTCGGGATCAACGGTGGGAAACCTG
CTAGGTGTGATCGGTGTGGACGTGAAGCTGGAGCAGGTGCAGAACTCGGT
CGAGGAGATCAACTTTTTGACCACCGGCTACTCCATCCTGGCGACGGCTG
ACGAAGGGATCGTGCTAGCGGGTCGGGTCTGGGGCACTGCGGATGACGGC
GCAACGGCAACGGTGTGCGAACTCGGGATTGGCATCTGCTCCAGCAACGA
CGGCGACGGATGGAGGGATCTCCTCGCGGACACGCAAAACGGGGGCGTGA
AGACCTTTACTTCTTTGTCCACCAACAACTCCAACGAGGACTCTATCCTC
GTCGCCGCTCCCGTAAAGGCGACCTTCGACACCACCGCCTCCGGCGGCGA
GGGTAACGTGACCCACTACTTCCTGAGTATCGTTCCGAAGAGCGAAATCT
TCGAACCGGTGGACACAATGATGAAGCTTATTCACAAAAGCTTCATGCAG
ATCATCTTCACCACCGCCATCGTGGCCGGCTGCACTTTGCTCGCCGTGGC
CGCCGCCGTGTACTTCTTATCCGGGTCCATCACACGCCCCATCGTCAAGA
TGACCGCGGCAGCCCGTAGCATCGCCGAGGACGGGGCCAAACACGACGTC
TTCGGCAGCGTGGCCGACTCCTGGGGGCATTTCTGTTATGATACACCTTT
CTTCCTCGACATTTTCTCCTCGCTCTACAGGATCGACCGCACCAAAGCCT
TGGACTACCTCCTCTGCAGGGGGGACGACGAGATCTCGACCCTCGCGAAA
GAGTTTTCCGACATGATCACCGGCCTGGGTCGGCGGGGATCGGCCGCGGG
GACCAAGAGCCTGACGGGCGGCTCGGGGTACCCAGACAACCCCTTCACCG
TAAAATTCGTCAGGCCGCCCCCGACGGCGCCGTTTTCCTCAATAACTGAG
GAGTATTAG
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