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Homology
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI) HSP 1 Score: 283 bits (723), Expect = 5.470e-82 Identity = 164/231 (71.00%), Postives = 172/231 (74.46%), Query Frame = 3
Query: 249 DADSSGGGTTVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPA-DISTQASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGVRCPESVDVPVPKAPPPPEVVQEESPFAPLGGAISGAAAAAGGR---KNAGSKPKGKAIAPKDFFAAA 929
DA + GGT VQYL+ELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF QRQG RKVS TYLV GR+G GG GA+EVKLVSAEGLDSTRK LE+VT VHVYSVQ APCSQPA D+STQ LWATDLEH+KEMVEEST+AGANLRTHRLSGVRCPE VDVPVPKAPP KNA SKPKGKAIAPKDFFAAA
Sbjct: 4 DAADASGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSGIGGFGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQ------------LWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAA 222
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A6H5KL09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL09_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.220e-30 Identity = 90/131 (68.70%), Postives = 96/131 (73.28%), Query Frame = 3
Query: 2130 VSGAMDKFTAKGNGGGGSVGGVALKRTKTVLQNRTYMEGGYMKTVREEVEVTDDEEEPPLQPAKTNQTRIPPTDNKKAKTGEENGAENKA---AGTAGKTAAGKTKK----SAPKTTGKQQASMMSFFKKA 2501
V GAMDKFTAKGNG G GVA+KRTKTVL++RTY EGGYMKTV EEVEVTDDEEE LQPAKTNQ+R PP KKAK G EN AE AG GK A TKK +APK+ GKQ ASMMSFFKKA
Sbjct: 215 VRGAMDKFTAKGNGTGVDSSGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEA-LQPAKTNQSRTPPPGTKKAKIGVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQ-ASMMSFFKKA 343
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A803YPC9_MELGA (DNA polymerase delta subunit 3 n=2 Tax=Neognathae TaxID=8825 RepID=A0A803YPC9_MELGA) HSP 1 Score: 77.4 bits (189), Expect = 4.810e-13 Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQ----GGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAA 575
YLE ++ +V D+ ++VT++WL+ L V N AK+MLYD+ +R+ G ++ TYLV G G +V +V + L++ + L +VTSVHVYS+Q A
Sbjct: 6 YLENIDEFVTDQNRIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVAGNLTQNGHTCHKVAVVREDKLEAVKSKLTTVTSVHVYSIQKA 106
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A8B9JG61_ASTMX (DNA polymerase delta subunit 3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JG61_ASTMX) HSP 1 Score: 80.1 bits (196), Expect = 4.630e-12 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF----SQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHRLHLWAT 656
YL+ ++ +V D+ K+VT++WL+L L V N AK+MLY + + + G + TYLV+G+ GS +V +V + LD T+ L+ SVHVYSVQ A + ST A++ + ++T
Sbjct: 5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYST 133
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3) HSP 1 Score: 80.1 bits (196), Expect = 5.170e-12 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAME-VKLVSAEGLDSTRKGLESVTSVHVYSV 566
YLE L+ +V+DE K+VT++WL+ LSV N AK+MLY + Q+Q + + TYLV G G M+ + LV L++T+ L+ VTSVH+YS+
Sbjct: 7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMKKLSLVRGNQLEATKCSLDKVTSVHIYSI 101
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: W5K564_ASTMX (DNA polymerase delta subunit 3 n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K564_ASTMX) HSP 1 Score: 80.1 bits (196), Expect = 8.130e-12 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF----SQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHRLHLWAT 656
YL+ ++ +V D+ K+VT++WL+L L V N AK+MLY + + + G + TYLV+G+ GS +V +V + LD T+ L+ SVHVYSVQ A + ST A++ + ++T
Sbjct: 5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYST 133
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: H9GKZ2_ANOCA (DNA polymerase delta subunit 3 n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9GKZ2_ANOCA) HSP 1 Score: 79.3 bits (194), Expect = 1.200e-11 Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQG----GRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHR------LHLWATDLEHSKEMVEESTDAGANLRTHRLSGVRCPESVDVPV 767
YLE ++ +V D+ +VVT++WL+ L V N AK+MLYD+ +R+ G ++ TYLV G G +V +V E L++ + L +V SVHVYS+Q A + ST ++ +H A + EM + T A N ++ L G + PV
Sbjct: 6 YLENIDEFVTDQNRVVTYKWLSYTLGVHVNQAKQMLYDYVERKRKESPGVQLHVTYLVAGNLVQNGHTCHKVAVVKEEKLEAMKSKLSTVASVHVYSIQKATLKDSGPLYSTDYDIIKANLQNCSKFSAIHCAAAVARSAAEMAQVETPASVNAQS--LPGTNAAAAAAAPV 175
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI0009E350DA (DNA polymerase delta subunit 3-like isoform X2 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E350DA) HSP 1 Score: 78.2 bits (191), Expect = 1.620e-11 Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRK----VSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADIST-QASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGV----RCP 746
YL L+ +V DE K+VT++WL+ LSV N AK+MLY F+Q+Q K ++ TY+V GR G + E L+ T+K VTS+H+YS+Q + T R+ + + W+ H V + D G + T R++G+ +CP
Sbjct: 8 YLANLDEFVNDEDKIVTYKWLSRTLSVPVNKAKQMLYAFAQKQKTSKSASHLNITYIVGGRCSLDGEKVHRYVITQDENLEETKKSFSVVTSLHIYSIQKCQLKDSNSLYTVDYDMQRQHNNESNRWSHV--HCSAAVPLA-DKGVSRGTRRINGLANGEKCP 167
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A673A7P9_9TELE (DNA polymerase delta subunit 3 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673A7P9_9TELE) HSP 1 Score: 77.8 bits (190), Expect = 1.840e-11 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLY---DFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADISTQASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRT-HRLSGVRCPESV 755
YL+ ++ +V D K+VT++WL+L L V N AK+MLY D +++ G ++ TYLV+G+ G + +V +V E L+ + + V SVHVYSVQ A L++ D + +E NL+T R S +RCP +V
Sbjct: 5 YLDNIDEYVNDHNKIVTYKWLSLTLGVHVNTAKQMLYHYLDHKRKESGAQLHATYLVSGKFVDNGQTSHKVSVVREEQLEDFKSKMNLVVSVHVYSVQKALLKDSGP----------------LYSVDYDAVRE----------NLKTCSRYSAIRCPSAV 139
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI000C04A474 (DNA polymerase delta subunit 3-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04A474) HSP 1 Score: 79.3 bits (194), Expect = 2.090e-11 Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 3
Query: 285 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVST----TYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADIST-QASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGV 737
YL L+ +V DE ++VT++WL+ LSV AN AK+MLY F ++Q G K + TYL+ GR G + E L+ T+K VTS+H+YSVQ + T ++ + W+ H V + D G N H ++GV
Sbjct: 8 YLANLDEFVNDENRIVTYKWLSRTLSVPANRAKQMLYAFVEKQKGSKTGSELDVTYLIGGRCSVDGDTVHRFVITQDEKLEETKKNFSLVTSLHIYSVQKCKLKDSNSLYTVDYDVQKQHSSETNRWSHI--HCSAAVPRA-DKGVNRDAHLMNGV 160
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LT01 |
| Preferred name | POLD3 |
| PFAMs | CDC27 |
| Model size | 3279 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K03504 |
| KEGG Reaction | R00375,R00376,R00377,R00378 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03430,ko03440,ko05166,map00230,map00240,map01100,map03030,map03410,map03420,map03430,map03440,map05166 |
| KEGG Module | M00262 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000228,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006273,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016043,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019725,GO:0019899,GO:0019985,GO:0022402,GO:0022616,GO:0030894,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0033683,GO:0034061,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042575,GO:0042592,GO:0042769,GO:0043150,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043601,GO:0043625,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0046483,GO:0050896,GO:0051276,GO:0051606,GO:0051716,GO:0060249,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0104004,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903459,GO:1903460,GO:1904161,GO:1990234 |
| Exons | 10 |
| Evalue | 3.91e-85 |
| EggNOG OGs | 28HEU@1|root,2QPSW@2759|Eukaryota |
| Ec32 ortholog description | DNA polymerase subunit Cdc27 |
| Ec32 ortholog | Ec-08_004310.1 |
| Description | nucleotide-excision repair, DNA gap filling |
| Cds size | 2268 |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko01009,ko03032,ko03400 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791604.3109066-UTR-P-littoralis_Contig78:254083..254158 | 1680791604.3109066-UTR-P-littoralis_Contig78:254083..254158 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig78 254084..254158 + |
| 1680791604.327348-UTR-P-littoralis_Contig78:255925..256086 | 1680791604.327348-UTR-P-littoralis_Contig78:255925..256086 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig78 255926..256086 + |
| 1680791604.4502552-UTR-P-littoralis_Contig78:262034..262809 | 1680791604.4502552-UTR-P-littoralis_Contig78:262034..262809 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig78 262035..262809 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791604.3416677-CDS-P-littoralis_Contig78:256086..256152 | 1680791604.3416677-CDS-P-littoralis_Contig78:256086..256152 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 256087..256152 + |
| 1680791604.3574479-CDS-P-littoralis_Contig78:256647..256730 | 1680791604.3574479-CDS-P-littoralis_Contig78:256647..256730 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 256648..256730 + |
| 1680791604.36742-CDS-P-littoralis_Contig78:256929..257029 | 1680791604.36742-CDS-P-littoralis_Contig78:256929..257029 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 256930..257029 + |
| 1680791604.3811483-CDS-P-littoralis_Contig78:257359..257518 | 1680791604.3811483-CDS-P-littoralis_Contig78:257359..257518 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 257360..257518 + |
| 1680791604.3908768-CDS-P-littoralis_Contig78:257982..258062 | 1680791604.3908768-CDS-P-littoralis_Contig78:257982..258062 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 257983..258062 + |
| 1680791604.4013722-CDS-P-littoralis_Contig78:258394..258762 | 1680791604.4013722-CDS-P-littoralis_Contig78:258394..258762 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 258395..258762 + |
| 1680791604.4123127-CDS-P-littoralis_Contig78:259417..260459 | 1680791604.4123127-CDS-P-littoralis_Contig78:259417..260459 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 259418..260459 + |
| 1680791604.4270756-CDS-P-littoralis_Contig78:261149..261312 | 1680791604.4270756-CDS-P-littoralis_Contig78:261149..261312 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 261150..261312 + |
| 1680791604.440477-CDS-P-littoralis_Contig78:261827..262034 | 1680791604.440477-CDS-P-littoralis_Contig78:261827..262034 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig78 261828..262034 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig78.60.6 >prot_P-littoralis_Contig78.60.6 ID=prot_P-littoralis_Contig78.60.6|Name=mRNA_P-littoralis_Contig78.60.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=756bp
MGGEDADSSGGGTTVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKK MLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLE SVTSVHVYSVQAAPCSQPADISTQASALRRGRHRLHLWATDLEHSKEMVE ESTDAGANLRTHRLSGVRCPESVDVPVPKAPPPPEVVQEESPFAPLGGAI SGAAAAAGGRKNAGSKPKGKAIAPKDFFAAAAGGKGKGKGKGGGGGGGGG ESKAAIEDGQGAAAAATAVAAPAKKKTGIGSFFGKASAAPPSAAPAKKVT DTKKGGAEAGDYVDADDTIDLASGDEDGAAAAAAETKKQQPQPKPRSSRK MVIEEDDDEEELLPSGGGLGAGNGCDAVQKEGEVGDEGDGLEDSEEEWDD GVGNSSSKIPAAAAAAAAVGAVVSTKSSSSSSKKPTTAPTAAAVAAAAAA KKGEEETKKKKKKSPPAPSSKSKKASSETNNAGSQDDGGCEDASDPADED EKNKKHGAKKTKATTPPSTASSAKKKPRKSLPDSSESGNEGSSSSSSSSS DGGDDEKESGAAAKASEKKPKKNASGGKRGVGSDGGAESKDSGGGEAEKK KRGKAGGAGGKRKGRYDSDDDEGEETPEKGAVSGAMDKFTAKGNGGGGSV GGVALKRTKTVLQNRTYMEGGYMKTVREEVEVTDDEEEPPLQPAKTNQTR IPPTDNKKAKTGEENGAENKAAGTAGKTAAGKTKKSAPKTTGKQQASMMS FFKKA* back to topmRNA from alignment at P-littoralis_Contig78:254084..262809+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig78.60.6 ID=mRNA_P-littoralis_Contig78.60.6|Name=mRNA_P-littoralis_Contig78.60.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=8726bp|location=Sequence derived from alignment at P-littoralis_Contig78:254084..262809+ (Pylaiella littoralis U1_48) GTTTGGGCAGTGCTCTCCCTGGGCTGGCGTCACATCACACACCCACAAAC
TTGCCCCAAGAACATCACGCGAAAGGTCAGCATTGATGGTCCATGCATGT
TCAGGTCGGGCGATGCCGAAACTTCGGTGAAGCTGAGTTCTAGTGCTGTA
CATGGCGGGTGGCTTCGCATCCCGACCTTCTCTTGTGTTTGTAGGTTGAC
ATTTTTAAATTCGTGTGATACGATAGATCGCCGCGCGCATCCGCCGGTAG
ACCTTTCCAAGTTTATTTTATGCCTCTGGTGAGGGATTACGTGCCAGGAA
CATTGCGGGAGAATATGTGGGAGCTTTTCCAGGCAAAGGGCTCGCCTCTC
GCGCATTGTGGTAGCATGAAATCATCAAGTATTTGCCGATTTCAGCACGA
GAGTAAAAGAGGAGGCGCTTCTCAACAGCAGTCCACAGACAGCAGCAGTT
TCACACACACACATGGCATATTCCCCACCCACACCCTTTGCCGACGGAGC
AACAGGAGCAACAGCCGCAGCAAACAAAAGCAGGTACCCCGCAAGGTGGA
TATACTACCCCCCCCTCTCGTAGCGTAGTATTGCGCTCGGTCTTCCTCGT
GTGGGCAACACCGTCACGTCCAAACCTCAGCTTAACTGTTCGATTTTTTA
AATTTTTTTCAGAGACAATCAATCCAACACACCAAGAGGAGTACAACACC
TGTAAACAAATACAAGTACCAGGTACAGCAGTGTGTCATGACATGTGATA
CGATGCGCAGTTTGAATCTCAGTCAATCTCCCCGTTTGGTTTTAAAACCT
GTCCATGTTGACTATTGTGCTGTAGGCGCCAACTTTCGTCGCTGCTCGAT
TCCCGCGGCTATGTATCTATTGTTCCTGTATTCGAACCCTCTCGTTGGTT
TTCCTGCAGGCAGACAGCAGAAAAAGCCGGCCTCTTGTGAACTGATAAAG
TTCTGGTTCAGACCCTCAAGTTCCCCAACAGCCAAGTGTCTCTCTCAGGT
GCCCTGCTGTGGTAAACTACTGCTGTATCATATCATGACCCTGCTGCACG
TACAGCAAGCAGTATCCATAGCGATATGCAGCAAGCAGTACGTAGCATAC
AACATACTCGAAGGACATGTTTTAGCGGCATGTCGTCGAAGGCAGTGAAC
AATAATCTCAGTGGTAAAGTTGTTGCTCGTTCCGCGTGCGTCGGGACTAG
GACAGGGTGAACGCGCGCAGCGCACAGCGCACGAGTCGTCCTTGGACGCG
GCATGAACGTCAGGTTGTTCGTTTGTTCGTGCGCCTCGGGATTTGATTCC
GAACAGAAGAACTGCTGTCTGTAGCGCATCGCGGCTGGTTGGGTTTTGCG
TCAGAACAGCAAGCACTCGCAAGGATGACTGCGCGTCGCCGACGGCGTCT
ACCGCCGTTTGCAGTTTTCACACCACATCATACAGCCGTACCTTGAGTTT
TCTTTCTCTCGCGGTACCAACGCAGACGATGTTTCGACGCGCTTCCATAA
GATCCTATCGCAGGCGTGCCGGTACACAACAATAATATGCTTCGAAGCGC
TCGAAGCATTCCGGGAAAAAAAAACCGATCACGCCCGGGTATGTACTAGA
GGACACAGATCTAATGGTACAATATGATAACCTGTTCTCGTTTGACAGCA
CAGCTCATATGATATACCAGGGTGTACTCCGAGTGTTGTCTAAATACTAA
GTACAGCAGCGGAGCAGTGGGCCACAATGCAATCATGTCGTTCACTGCAC
CCTGAACTGTCGTATCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCCCTTCGGGAAAACTACCAAACAGCTCCGCAC
CGCCACCTGATTTTTACAACTTTTGCCTGCGTTGGGTCTACTCCAGCCGG
TGTGCGCGGAGAAGAGAGCCGAGCGGGCACTGTCTCGCCGCCTCAAGTTT
TTGCTTTTTGTCAAAACTCTCGTGGCGAAAAGAGTGGGAGTTTTGCAGAG
GGGATGGGGGGGGAAGACGCAGATTCGAGCGGAGGGGGGACGACAGTCCA
GTATCTGGAGGAGCTTGAGGTAGGCGAGACGTGGACTGAGGGGTGTATGT
GTGTGATACTTACACCACGGCGGTGTTTTGTTGTGTTGTTCCCGCCCTAT
GTATCATGCAGTTTGACAGGGAGAGCTAGTTTTTTTGCTTGTTTTTGTCG
GCCAGATCTAGACCTTGTCAGGCTGGGGTACACCACCACCACCACCACGA
CTTGGGCTCTCTTTCGCATGTTTTTGATAGGATGGATGGTCTTTCTCTTT
CCCAACAAGACGCTAAAATGAAGGCGAAAACCGCGATAGCTATTGCATTG
ACTGAAAAGCGCTGAAAACCCCTCCCCCCCCCCTCCCCACTCCACGCGCA
ACTCTGATGCATCGGCGAACTCCGCCCTATTGCACCGTCCATACCCTCCC
CCCCCCACGCAAATACATTTTCTAACCTCGTTGGTTGCTGTGCCGGCTGT
TTTCCCGTCTGAATAACCGTGTGGTGTTGCCATCATTGTCTCTGTTTGAT
GTTGACGGAACAAGGGATGGGTCCTCGATGAGCAGAAGGTGGTGACCTTC
CGCTGGTTGGCGCTGGTGCTTTCCGTCACTGCAAATGCTGCGAAGAAGTG
AGCCGCCCGCGAGTCGGCTTATACCGCGTTCCACCCCTCATGGTTGAGAT
ACATTTATTCTGTTGTAGAGCAGGCGCTATCAGGCGGGGTGTGGTGTGAA
TAGATCCCCGGATTTTCTCCCGTCTTTTTCTCGGGGGCGCAAACCCATTC
CTTAAACCCTAACCCTAACCCAAACCCATTGCACGTTTGTGTGCAGGATG
CTCTACGACTTCTCCCAGCGGCAGGGCGGGAGAAAGGTCTCGACGACCTA
CCTCGTCACGGGAAGGAACGGCAGCGGTGGCTCAGGAGCCATGGAGGTAT
GGATGTATGTATTGTGTATGTATGTTTGTATGTATGTACTTCTTAGTATG
TATGTATGTATGTATGTAGATATGGAGATGAATACCTCATGTGATACAGC
CTTTGTATACATACTTCGTATGTACTTTTGCTTTGATTCTTACACCTGCA
GCAGATTCTTCTACTCAGCAGCTATGATGAAAGTATAAATCCAAAGTACT
CAGCAGTCACAATGAGAAATGTTGCGGTTACCTTTCCTCGGCCTTTCCCA
TTTCCCTTACTAGAACGAATGCCGTATTTTTTTGTGTCTTGGGTGCTTGG
CCTGGGATGCTGCTGCGGTATTTTAGGTCAAGCTGGTGTCGGCGGAGGGT
TTAGACAGCACCCGGAAGGGGCTCGAAAGCGTCACGTCGGTCCACGTCTA
CAGTGTGCAGGCGGCGCCGTGCTCTCAACCCGCCGACATTTCAACACAGG
CAAGCGCACTTCGACGCGGTCGACATCGATTGCATGTTCTTTAATCTAGA
ATCGTGCGTTTTGACGCAGTTAATCCGTGTAGATGGGAAGAGAAAACACC
GACGTGAGTGTCATACGTACGACAACGGTTGAAAAAATATCGCTCTCGTG
TTCTCGTCTTTTTCGTTTCAGCTACACAACATAACAGTCTGGGAATAAAA
CGCAGGAAGACTAAATTCACGAGTCAGGGTTGGCCGATTCAGTGATGATT
TGCTTCTTTTTTTTTCGCAAGCCACGCACGAAGTACGAAGTATGTTGCAA
CAAGAATGTTCTTTGGAAAATATTACACTTGTGGACAGGAAGTTCGACAT
GAAGAGTACGAAAACATCCTAAAGTCAGCAGCAGCCTTCTATGATATGCT
GTTCTTTCCCGAGCCCCACGGAACGATTGCACGTTTTATCCCGTCGGCGC
TGTCTCGCGTACGCCGTTTTGTCGATGGATCGTTGGTCTGGTTTTGCAGT
TGTGGGCGACGGACCTGGAGCATAGCAAGGAGATGGTGGAGGAGAGTACG
GACGCAGGGGCCAACCTCAGGACGCACAGGTACGAGGACCCCGATAGAAG
CGAAGGGAGATAGCTTCTTCGAGACAAAAATCAACACCCTTTTGTGATCC
GCAGTCACAATCGGATATAATCAGAGGCATAGAGACCACCCCAAGCCATA
CGTATAACATGAATAAATAAATTCATGTGCGCATTTGATTTTCCGATGAT
TTTCGTCCCATCATAATGGGAGCAAACAACAATACACCCACCACCACCGC
TACCAACCACCAAATACGAGGCGAGTGAGTGAGTCAACTGCCTCGTGTCC
TCCCCCGTGACGACGCGGTGAATCAATCAAACGACAAAAATATTTTACGT
ATGATACACAGGCTGAGCGGAGTTCGCTGTCCCGAGAGCGTGGACGTCCC
CGTCCCAAAGGCCCCGCCACCGCCCGAGGTCGTTCAGGAAGAGTCGCCGT
TCGCACCGCTCGGCGGCGCGATAAGCGGCGCGGCAGCGGCGGCGGGCGGG
CGCAAGAACGCCGGCTCAAAGCCGAAGGGGAAGGCGATAGCCCCCAAAGA
TTTCTTCGCCGCGGCAGCGGGGGGCAAGGGCAAGGGGAAGGGGAAAGGGG
GCGGTGGAGGAGGTGGAGGAGGGGAGAGCAAGGCGGCGATAGAGGACGGA
CAAGGGGCGGCGGCGGCGGCGACAGCGGTGGCGGCGCCTGCCAAGAAAAA
AACGGGTATCGGTTCATTTTTTGGAAAGGGTGAGTTGGGCTAAAGCTGAG
AGTTGAGCCGGAGGAAAAGAGAGGTGAAAATGGACACGGAGGTGGAAAAC
GTGTTACTGTCTAGAGGCCGGCACAATAGGAAGGGGAGGGAAGTATTTAT
CATCATGATTGTTTGCGTTTGACTTGTTTTTGCCCTGTGTCCTCTGCGGC
AAGCGGTCGGGCCGCTCTTTTTTCGGCGTGGGTCGGGGCGTTTTGTGACT
GGGTTTTGGTTGTTTTTGTGTGCGTACTCCTGTCTTTTCTGGCTCGTGGT
GCAAAGCACTTCCGTTAATGTTGAGGGCTTGCCTGCTGCTAGGAAGAACC
CTGTCTTTCGTCTCCCAGAGTTGTTAGTGTGAATCATGTGGAGAGCAGCG
CAAACGAAGCACACACGCCCACAGGCGCACGCCCTCTCCGCCTTCGAAGG
TCTACCGCCGGACGTACCCTCTCGCTTATACGCCATAGCTGTATGATAGC
TCCAGACCATAAAGTTCCTTTCAAAGGTGTTCATTCAGCCCTTCATGTTG
AGAATTCAGGGGGGGTGCATCTTTTGACTGACAAAAAAACGGCCGAACAT
GTGAAAACTATGGCGTGCCGAAGGAAAGTGAGAAGTATTGACCCCCCCTC
CCCTCTCCCCGACCTCGTTCTTCCTTTGTTTCAGCTTCCGCGGCACCTCC
CTCAGCGGCTCCCGCGAAGAAAGTTACCGATACGAAGAAGGGGGGGGCGG
AGGCGGGTGATTACGTTGATGCGGACGACACGATCGACCTCGCAAGCGGC
GACGAAGACGGCGCTGCTGCTGCTGCTGCTGAGACGAAGAAGCAGCAGCC
GCAGCCGAAGCCTCGCTCGTCGAGAAAGATGGTGATCGAGGAGGACGATG
ACGAGGAGGAGCTTTTACCAAGCGGTGGGGGGTTGGGGGCGGGGAACGGT
TGTGATGCTGTGCAGAAAGAGGGGGAAGTGGGGGACGAGGGCGACGGTCT
CGAGGACTCGGAAGAAGAGTGGGACGATGGGGTCGGTAACTCTTCTTCCA
AGATTCCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGAGCGGTGGTCTCC
ACGAAGAGCAGCAGCAGTAGTAGCAAAAAGCCAACAACGGCACCAACCGC
AGCAGCAGTAGCAGCAGCAGCAGCAGCGAAGAAGGGAGAAGAAGAGACGA
AGAAGAAGAAGAAGAAGTCACCACCTGCTCCTTCATCGAAATCCAAAAAG
GCCTCGTCGGAAACGAACAACGCCGGCAGTCAAGACGACGGCGGTTGCGA
GGACGCGTCTGACCCGGCGGACGAGGACGAGAAGAACAAGAAGCACGGTG
CCAAGAAGACCAAGGCGACGACGCCGCCCTCCACGGCCAGCTCCGCCAAG
AAGAAGCCCAGGAAGAGCCTGCCCGACTCGTCGGAGAGCGGCAACGAAGG
CAGCAGTAGCAGCAGCAGCAGTAGCAGCGACGGAGGGGACGATGAGAAGG
AATCCGGCGCCGCGGCCAAGGCTTCAGAGAAGAAGCCCAAAAAGAACGCC
AGCGGTGGCAAGAGAGGTGTCGGCAGCGACGGGGGGGCGGAGTCGAAGGA
CAGCGGCGGCGGTGAAGCGGAGAAGAAGAAGCGCGGAAAGGCCGGCGGGG
CGGGCGGTAAGCGCAAGGGGAGGTACGACAGCGACGACGACGAAGGAGAG
GAGACTCCGGAGAAGGGAGCCGTCAGGTGAGATGGGGGCGGGGGTGGCGT
GGGATGGCATGGCATGGGGGGGGAGGGGGGGGACGACTTCCATTTTCTAA
TGTTCGTTGAGGATACATAGTGTTGATTTCCCAATTTGTTGTTCGTTGTT
TTTACTCGCATGGTTTAAGCGCGTCGTGCATTTGTGCAAACGGCAATGCT
GCGCGTAGTCGTTTCTTCATCCGACAGAGGTGGTGTGGGAAATTTTTCTT
TCGACTGCCGTTTTTATGTAGCGCTGCGTGCATGTTCTCTCAAGCGTGGT
ACCTGGTATGTCTTGTTGTCGTCTTGTATGCCGGTTGCGACACAAAATTA
ATTCTTATCCCCGAATTGCTCTCACGAATTGGCGTCTTCGCAAGCGTCAA
GAGGAAGGAGCAGCGATGAAGGCGAGACGGCACGACGCATACCACACATA
ACGCAAGAACACACAGGCTGCTTGCTACCAACACACCAGAGGTGCCCAGC
GGTATGCCGCAGCCTCGACGACCCACCCCGGGACTCGAAACCTTTCAAGT
ACCCCCCCTCCCCGACATACTTTTCACCCTCAAGCCGAACCCCCATCTAT
TATCCCGCATATCCTTTTCGTCTTGGGCCCCGCCGAGTATATTACCCCGC
CAAGATTTTCAACCTTTGAGCCTCACCGCATCCGATCGGTGCTTCTTCTC
TCTCAATGACGATCAGCGGGGCGATGGACAAGTTCACGGCCAAGGGTAAC
GGTGGTGGCGGCTCTGTCGGGGGCGTGGCCTTGAAGCGCACGAAGACGGT
CCTTCAGAACAGGACGTACATGGAGGGCGGCTACATGAAGACCGTCCGCG
AGGAGGTGGAGGTCACTGACGACGAGGAGGTGTGCGGTCGCGATCTTTTT
TTGTCATCGGATCTCGGTATTTTGTGTGTGTGTGTTTTTTCTCAGAAAAA
TAAATACGAAGAACTTCTTGACAACAACAAAAATGAAAACATCGTACAGC
AGTATCGTTTGATTAGTTTTTTTTATTAATCGCCAACATCACACTTCGTA
TCGTATCTGCTGCTGTTCACAAGGCTACCGTTACACTGTATGATAGGAGT
GTAAAAGGGTACAGTAGGCATTATGCGTGCGTAGGCGTTCCGCAGTATTT
TTTCTTGTGTGTCTACGCGCGCAATCAGCGAGTGATTCATGAACCCCTCG
GGGAGATGGATGGGCTTTCACATCTCAGTAGGCATGCATGTTATGAGCTT
GTTCCGTTTCACAGCAGTAACGCGAAACGGCGATTGACAACTGCACACAC
CATGCTCTCATGTGTTGACTTTTGTTTTGTTTTGTTTTGTACTTGGCTCG
ATCGTATTTTTATTTTTGTCTGTTCATGTCCGACCGCCGGCCAGGAGCCG
CCGCTGCAGCCGGCCAAGACCAACCAGACTCGAATCCCTCCCACGGACAA
CAAGAAGGCTAAGACCGGCGAGGAGAACGGCGCGGAGAACAAGGCGGCGG
GCACGGCGGGGAAGACTGCCGCCGGCAAGACGAAAAAATCAGCCCCCAAG
ACCACCGGGAAGCAGCAGGCCAGCATGATGAGCTTTTTCAAGAAGGCATA
AGTGACTGGGCAGCAGAAGTACATATGTACGAAGTAGGGTATTTTTCTTT
GTTCGCGTGCTTGGTAATACTGGACCACACCAGCCCCCAACGGCGGTAGA
GATTGGTGGTCCAGATTTTCACGGTGCAGCACAGAAAGTACGTGCGATGC
TGGGGGGTGTGTGTACTCACCCAAAAGTCCAGGAAGATGCAAGGAAAAAG
GCTCTCTGTGTACAAGTAAGTACCATTGCAGATTGAATCTGGCAACGGCA
CTACTCTCAAGCACCACGTGTGAGCTCGCAAGATTTTGATGGGTTCGGCG
TCGGCGTCTTTCTTTTGGGGTGGAGTTTTCGGACGTTTGCTCGCAGGCCG
TGGTGGTGTTCACGCTAACGTTGTGCTGTTGCTTCATTTGGATCCTTTCA
TCAAAGTTCGGTCGCCGTTCGGCGTGAAGAATGGTGGGCAAGGGCGGACA
TATGATATGCTCCTGCAGCCATGTTGCTCTCCTGGGAAACTCATTCGTCG
TTGTCTAAGGTGTGTTCCCTTGCCGCTGCGTGTTTCATTGTGTGTATCGA
GGAAATTCGGAGGTTTTGCAACTTACGTTTGTTGTAGGAGGTGCGAGAAG
AGACTGCGGGCAGCGGAATACAAACGTAATTCCTTGCAGCGAACGCTGTG
CATGGCCCGGTGAGCACCAGATTCATCTGGGACAACAGAGCCATGTTCGA
TCACAGCCGAGGCTGAGACACATACCCTGCCCCCACGTTCTGCACGGAAT
ATTCGAAATATATCGCGGATCGGGAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig78:254084..262809+ >mRNA_P-littoralis_Contig78.60.6 ID=mRNA_P-littoralis_Contig78.60.6|Name=mRNA_P-littoralis_Contig78.60.6|organism=Pylaiella littoralis U1_48|type=CDS|length=2268bp|location=Sequence derived from alignment at P-littoralis_Contig78:254084..262809+ (Pylaiella littoralis U1_48) ATGGGGGGGGAAGACGCAGATTCGAGCGGAGGGGGGACGACAGTCCAGTA TCTGGAGGAGCTTGAGGGATGGGTCCTCGATGAGCAGAAGGTGGTGACCT TCCGCTGGTTGGCGCTGGTGCTTTCCGTCACTGCAAATGCTGCGAAGAAG ATGCTCTACGACTTCTCCCAGCGGCAGGGCGGGAGAAAGGTCTCGACGAC CTACCTCGTCACGGGAAGGAACGGCAGCGGTGGCTCAGGAGCCATGGAGG TCAAGCTGGTGTCGGCGGAGGGTTTAGACAGCACCCGGAAGGGGCTCGAA AGCGTCACGTCGGTCCACGTCTACAGTGTGCAGGCGGCGCCGTGCTCTCA ACCCGCCGACATTTCAACACAGGCAAGCGCACTTCGACGCGGTCGACATC GATTGCATTTGTGGGCGACGGACCTGGAGCATAGCAAGGAGATGGTGGAG GAGAGTACGGACGCAGGGGCCAACCTCAGGACGCACAGGCTGAGCGGAGT TCGCTGTCCCGAGAGCGTGGACGTCCCCGTCCCAAAGGCCCCGCCACCGC CCGAGGTCGTTCAGGAAGAGTCGCCGTTCGCACCGCTCGGCGGCGCGATA AGCGGCGCGGCAGCGGCGGCGGGCGGGCGCAAGAACGCCGGCTCAAAGCC GAAGGGGAAGGCGATAGCCCCCAAAGATTTCTTCGCCGCGGCAGCGGGGG GCAAGGGCAAGGGGAAGGGGAAAGGGGGCGGTGGAGGAGGTGGAGGAGGG GAGAGCAAGGCGGCGATAGAGGACGGACAAGGGGCGGCGGCGGCGGCGAC AGCGGTGGCGGCGCCTGCCAAGAAAAAAACGGGTATCGGTTCATTTTTTG GAAAGGCTTCCGCGGCACCTCCCTCAGCGGCTCCCGCGAAGAAAGTTACC GATACGAAGAAGGGGGGGGCGGAGGCGGGTGATTACGTTGATGCGGACGA CACGATCGACCTCGCAAGCGGCGACGAAGACGGCGCTGCTGCTGCTGCTG CTGAGACGAAGAAGCAGCAGCCGCAGCCGAAGCCTCGCTCGTCGAGAAAG ATGGTGATCGAGGAGGACGATGACGAGGAGGAGCTTTTACCAAGCGGTGG GGGGTTGGGGGCGGGGAACGGTTGTGATGCTGTGCAGAAAGAGGGGGAAG TGGGGGACGAGGGCGACGGTCTCGAGGACTCGGAAGAAGAGTGGGACGAT GGGGTCGGTAACTCTTCTTCCAAGATTCCGGCGGCGGCGGCGGCGGCGGC GGCGGTGGGAGCGGTGGTCTCCACGAAGAGCAGCAGCAGTAGTAGCAAAA AGCCAACAACGGCACCAACCGCAGCAGCAGTAGCAGCAGCAGCAGCAGCG AAGAAGGGAGAAGAAGAGACGAAGAAGAAGAAGAAGAAGTCACCACCTGC TCCTTCATCGAAATCCAAAAAGGCCTCGTCGGAAACGAACAACGCCGGCA GTCAAGACGACGGCGGTTGCGAGGACGCGTCTGACCCGGCGGACGAGGAC GAGAAGAACAAGAAGCACGGTGCCAAGAAGACCAAGGCGACGACGCCGCC CTCCACGGCCAGCTCCGCCAAGAAGAAGCCCAGGAAGAGCCTGCCCGACT CGTCGGAGAGCGGCAACGAAGGCAGCAGTAGCAGCAGCAGCAGTAGCAGC GACGGAGGGGACGATGAGAAGGAATCCGGCGCCGCGGCCAAGGCTTCAGA GAAGAAGCCCAAAAAGAACGCCAGCGGTGGCAAGAGAGGTGTCGGCAGCG ACGGGGGGGCGGAGTCGAAGGACAGCGGCGGCGGTGAAGCGGAGAAGAAG AAGCGCGGAAAGGCCGGCGGGGCGGGCGGTAAGCGCAAGGGGAGGTACGA CAGCGACGACGACGAAGGAGAGGAGACTCCGGAGAAGGGAGCCGTCAGCG GGGCGATGGACAAGTTCACGGCCAAGGGTAACGGTGGTGGCGGCTCTGTC GGGGGCGTGGCCTTGAAGCGCACGAAGACGGTCCTTCAGAACAGGACGTA CATGGAGGGCGGCTACATGAAGACCGTCCGCGAGGAGGTGGAGGTCACTG ACGACGAGGAGGAGCCGCCGCTGCAGCCGGCCAAGACCAACCAGACTCGA ATCCCTCCCACGGACAACAAGAAGGCTAAGACCGGCGAGGAGAACGGCGC GGAGAACAAGGCGGCGGGCACGGCGGGGAAGACTGCCGCCGGCAAGACGA AAAAATCAGCCCCCAAGACCACCGGGAAGCAGCAGGCCAGCATGATGAGC TTTTTCAAGAAGGCATAA back to top
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