prot_P-littoralis_Contig78.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.39.1
Unique Nameprot_P-littoralis_Contig78.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length73
Homology
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BLAST of mRNA_P-littoralis_Contig78.39.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.590e-15
Identity = 38/63 (60.32%), Postives = 43/63 (68.25%), Query Frame = 0 
Query:    1 MDRQKKRAGEGDNVDYVLARTVRCILQYNAPLLSKRRGGGNQCQRGACFKEAIDMFSGIKMEG 63
            +DRQK+R  +GDNV YVLARTVR ILQY A       G GNQC+RG CF  A+ MF G  MEG
Sbjct:  149 LDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEG 211
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BLAST of mRNA_P-littoralis_Contig78.39.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 8.680e-8
Identity = 29/46 (63.04%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:    1 MDRQKKRAGEGDNVDYVLARTVRCILQYNAPLLSKRRGGGNQCQRG 46
            +DRQK R  EGDNV YVLARTVR  LQY A       G GNQC+RG
Sbjct:  116 LDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRG 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE7.590e-1560.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI8.680e-863.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:180653..180871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.39.1mRNA_P-littoralis_Contig78.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 179912..180886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.39.1 ID=prot_P-littoralis_Contig78.39.1|Name=mRNA_P-littoralis_Contig78.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp
MDRQKKRAGEGDNVDYVLARTVRCILQYNAPLLSKRRGGGNQCQRGACFK
EAIDMFSGIKMEGTTPVKLSWH*
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