prot_P-littoralis_Contig779.23.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig779.23.3
Unique Nameprot_P-littoralis_Contig779.23.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length853
Homology
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A6H5JE06_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE06_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 8.060e-126
Identity = 344/838 (41.05%), Postives = 399/838 (47.61%), Query Frame = 0
Query:  100 EGVFIRGADRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTK---DEVQLGLARHGSSFGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPPPCAMPPASFQQEGTCT----------RYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDSPGRTKAYPGADAKLH------------LPLDGPG-GXXXXTPRPRRRRGQRGRRRAGNRVRCDLSSDNLDGL--HGVSVGGG-----------EGYGYPVG-PDEY--------------------EERLVGPPSLECF------FDAR---GGSGDSGGDGGGLSNSNGILYRPVPRLTQTFGCNDRSPGSASSXXXXXXXXXXXXXSPVTTPETLSNTPPSALLQQDATR-----TSFLGVGNR---TTPPLAREVWNQTQYQHLPRPAPTFFGMEEAGARRETVSADQLQKQQXXXXXXXXXXXXXLLQLRRQHYLYEGGASGVGGMVSRDVLAVSKTRQGLRLQHLQDEQQRFRQQQQLHGGHIDERASIVSLQLQVRELQRYLESKN---GVASGS-GTGPPASFLPPGLGLTDGSNGXXXXXXXLPGDSSSCSYRCPDDVSSVGDRLAALSWGNDSD---NNTASGIKNVLACPQQQGDRRAEAEGSIYCLGAGRDGRDGADYNE---AYWGATPSPFAGFGSLVPALAVSQAEASQWRRATPRL 850
            +GVFIRGADRR LQNLRV+RRTLVYAIGLSPNFAQVNTLKQPEYFGQYGE+AKLVINHH+GV QDDPRYGSASAY+TFRRQEDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD+EDRFTK   DEVQLGLARHGSSF FKE VLG+RGD                       A ++P NPVFPPPC MPPA +++ G             RYQ                                          XXXXXXX   D  G   A+PGA+A               LPLDG          RPRRR                  +    GL  HG    GG             YG+P G  +EY                       + G P  + F      FD     GG G  GG    L+  +G  Y P P+  Q F  +  + GS++              S + TPET SNT P  L   D +       SF G G        P A+E+WN TQY+H  RPAP FFGM +A    + +  D      XXXXXXXXXXXXX     RQ Y  E                                                   SI +L+ Q+++L+R  E  N   GVA G  G G P     PG+ + D S          P D  +       ++S V D+LAALSW +  D     T  G  N        G R+   +GS Y  G    G +   ++E     W   PSP AGFGSL    A SQAEAS+WRRATPRL
Sbjct:   56 KGVFIRGADRRALQNLRVVRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKAGSDEVQLGLARHGSSFAFKEEVLGDRGDT----------------------AARRPTNPVFPPPCPMPPAPYRRAGGGKPQRDGGNMGGRYQHRREGELCRHNTAGGNAPPPPKAQPTLLPPSPHDCHPCRTRGXXXXXXXDCVDCFGG--AFPGAEAARWAGGGAPLTPGSPLPLDGGSLSLSGSDERPRRRXXX-------XXXXXXXGATGTPGLVCHGHDACGGGXXXXXXXXXXXXYGHPAGVSNEYGGQRTAAGQQASHFELTAAAARAVPGSPPQDVFRLPDHAFDCSFEFGGGGRGGGRADDLATVDGNPYYPTPQPAQDF--DGGAYGSSAGWGKGRG-------SSLATPETQSNTSPLNLSPLDGSSPTSASASFQGFGXXXXXAPDPSAQELWNPTQYRHPARPAPPFFGMRDAAEAPQQLQRDAXXX--XXXXXXXXXXXXXXXXXXRQRYELE---------------------------------------------------SIAALKQQIKQLRRAAEEGNKSGGVALGHFGGGDPTRSRAPGVNVPDMSG-----PPPPPRDCGNRGSHSAAELSFVEDQLAALSWNDREDIAGGATGGGTNNTAGTLVSSGARQ---QGS-YGAGESIQGFEERSWDEDVGTAWPGVPSPLAGFGSLALPSAASQAEASEWRRATPRL 791          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: D7FX15_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX15_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 1.290e-109
Identity = 244/533 (45.78%), Postives = 279/533 (52.35%), Query Frame = 0
Query:  100 EGVFIRGADRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLARHGSSFGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPPPCAMPPASFQQEGTCTRYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDSPGRTK-------AYPGADAKLH------------LPLDGPG-GXXXXTPRPRRRRGQRGRRRAGNRVRCDLSSDN-LDGLHGVSVGGGEGYGYPVG-PDEYEERLVGPPSLECFFD------ARGGSGDSGGD---------------GGGLSNSN--------GILYRPVPRLTQTFGCNDRSPGSASSXXXXXXXXXXXXXSPVTTPETLSNTPPSALLQQDATR-----TSFLG---VGNRTTPPLAREVWNQTQY 573
            +GVFIRGADRR LQNLRV+RR LVYAIGLSPNFAQVNTLKQPEYFGQYGE+AKLVINHH+GV QDDPRYGSASAY+TFRRQEDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD+EDRFTKDEVQLGLARHGSSF FKE VLG+RG+                       A  +P NPVFPPPCAM PA +++EG     +              XXX                                     P RT+       A+PGA+A               LPLDG G        RPRRR                    +  DG  G +    + YG+  G P+EY E++         F+      AR G G   GD               GG              G  Y P P+  Q FG    S GS++              SP+ TPETLSNTPP  L   D +       SF G    G   + P A+E+WN+TQY
Sbjct:   57 KGVFIRGADRRALQNLRVVRRNLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKDEVQLGLARHGSSFAFKEEVLGDRGNT----------------------AAPRPTNPVFPPPCAMLPAPYRREGAGKPQRDGGNMGVGGRQQHQXXXDCEIYRHGNTGGNGPPPPKALPMSLPPSPQVC----HPCRTRGGGCCGGAFPGAEAARWAGSGAPLTPGSPLPLDGGGLSLSGSDERPRRRXXXXXXXXXXXXXXXXXXXGHGNDGCGGPTAPAQQQYGHHAGVPNEYGEQMTPAGQQASHFELTAAAAARAGLGSPTGDVFRLPDHVFDRPFEFGGXXXXXXXXXXXXXXGNPYYPAPQPAQGFGGG--SYGSSAGWGKGRN-------SPLATPETLSNTPPLELSPLDGSSPTSASASFQGFGCAGGGASDPSAQELWNRTQY 554          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A836CMF8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF8_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.490e-52
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
Query:  115 LRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEV 242
            LRVI+R LVY IGL P          P YFGQYG +AK+V+NHH GV  DDPR+GSASAYVTF  +EDAW+AI +VDGF + GR +RASFGTTKYCNSFLR L CNN DCLYLHELGD+ DRFTK+E+
Sbjct:    1 LRVIQRNLVYVIGLGPGIT-AGEAASPPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 127          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 196 bits (497), Expect = 3.980e-50
Identity = 100/194 (51.55%), Postives = 132/194 (68.04%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLARHGSSFGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPPP 301
            D+R+L N+RVI+R LVY IGL  + A    L++ E+FGQYG + K+V+NH+ G    DPR+GSASAY+TF  ++DA +AI +VDG++  GR IRASFGTTKYCN+FLRNLPC NP+CLYLHELGD EDR+T++E+Q G ++  +     + V+GE      GG S TG               K+ AN VFPPP
Sbjct:  107 DKRSLHNVRVIQRNLVYVIGLPLSIASEEDLRRGEFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEIQTGASKTDAGPFGTQTVVGE------GGPSGTG---------------KKVANSVFPPP 279          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.330e-45
Identity = 101/222 (45.50%), Postives = 137/222 (61.71%), Query Frame = 0
Query:  105 RGADRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSAS----AYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLA---RHGSSFGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPPPCAMPPASFQQEGTCTRYQ 319
            R  DR+ LQN+RV++R LVY IG+SP+ A   TL++ EYFGQ+G++ K+V+N +      DPR  SAS    AY+TF  +EDA A I +VDGF + GR +RASFGTTKYCNSFLRNL C NPDCLYLHELG++ED FTK+++Q G     ++ +  G  + V+   G+   GG S TG               ++  NP+ PPP     AS    G   +++
Sbjct:  144 RVPDRKNLQNIRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQIQSGQNSQFKNSTEVGTTDVVVRVTGN---GGPSGTG---------------RRVTNPIMPPPVFDTTASRVNTGAQAKHE 347          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS)

HSP 1 Score: 167 bits (422), Expect = 1.550e-43
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDE 241
            DR TL  +RVIRR LVYA+G+ P+ A    L++PEYFGQYG++AK+VIN +      DPR  SASAYVTF  +ED  A I ++DGF   GR IRAS+GT+KYC++F++++ CNNPDC YLH +GDQED FTK E
Sbjct:   83 DRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNHNPG--DPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A482RNX1_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNX1_9ARCH)

HSP 1 Score: 166 bits (420), Expect = 1.580e-43
Identity = 76/141 (53.90%), Postives = 109/141 (77.30%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLAR 248
            DR+ L N RV++R LVY  GL  +    +TL++PEYFGQYG+V+K+++  H+  A   P + + SAYVTF  +EDA A I +++GF + G  +RASFGTTKYCN+++R+LPC+NPDC+YLHELG++EDRFTK+E+QLG ++
Sbjct:   37 DRKHLHNYRVVQRNLVYVTGLPASCGAEDTLRRPEYFGQYGKVSKVIV--HRNAA---PPHHTVSAYVTFCHKEDARACIQALEGFVVEGHVLRASFGTTKYCNNYIRHLPCSNPDCVYLHELGEEEDRFTKEEIQLGSSK 172          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: A0A7S2Y5J5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5J5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.290e-41
Identity = 89/195 (45.64%), Postives = 123/195 (63.08%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLARHGSS-FGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPPP 301
            DR  L N+RVIRR LVYA+GL P     + L++ +YFGQYG++AK+V+N  Q  +  DPR  + SAYVTF  +ED  A I ++DGF + GR +RAS+GT+KYC++F++N+ CNNPDC YLHE+G  ED FTK E+Q G    G      ++ ++ E+      G  P   P  R GG    G  K  ++P+FP P
Sbjct:  118 DRTLLANMRVIRRNLVYAVGLPPTVGSEDNLRRADYFGQYGKIAKIVLNRTQATS-GDPRRATCSAYVTFVHKEDTLACILAMDGFHMDGRNVRASYGTSKYCSAFIKNVRCNNPDCTYLHEMGAAEDTFTKQEIQAGYVTSGRDVLARQQQIVAEQ--LKQAGSGPA--PRKRIGGGGPSGTGKASSHPIFPAP 307          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: K0T133_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T133_THAOC)

HSP 1 Score: 174 bits (442), Expect = 1.550e-41
Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLARHGSS-FGFKEAVLGERGDADHGG 270
            DR TL ++RVIRR LVYA+GL PN A    L++PEYFGQYG++AK+V+N +      DPR  SASAYVTF  +EDA A I ++DGF   GR +RAS+GT+KYC++F++++ CNNPDC YLH +G++ED FTK E+Q G    G      ++ ++ ++  A  GG
Sbjct:  195 DRSTLASMRVIRRNLVYAVGLPPNVATEENLRRPEYFGQYGKIAKVVVNRNHNPG--DPRRSSASAYVTFSHKEDALACILALDGFYHDGRNVRASYGTSKYCSAFIKSVRCNNPDCTYLHHMGEKEDTFTKQEIQAGYVTSGRDVLARQKQIMAQQAAAHFGG 356          
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Match: H3G5S5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S5_PHYRM)

HSP 1 Score: 161 bits (408), Expect = 2.010e-41
Identity = 77/141 (54.61%), Postives = 101/141 (71.63%), Query Frame = 0
Query:  108 DRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEVAKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLAR 248
            +R++LQN+RV++R LVY IGL   FA+ + L+  E FGQYG++ K V+N     A  D    +ASAY+TF  +EDA   I ++DG+ + G  +RASFGTTKYCN FLRN+ CNNPDCLYLHELGD +D FTK+E+Q G  R
Sbjct:   92 NRKSLQNVRVMQRNLVYVIGLPVRFAEEDILRSNECFGQYGKIVKAVVNKSHLSA--DRANATASAYITFANKEDALCCIVAIDGYYLDGSMLRASFGTTKYCNFFLRNMQCNNPDCLYLHELGDDDDSFTKEEMQSGTRR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig779.23.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE06_9PHAE8.060e-12641.05RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FX15_ECTSI1.290e-10945.78RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMF8_9STRA3.490e-5267.97Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4D5P1_HETAK3.980e-5051.55Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2GN38_9STRA5.330e-4545.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8BXU6_THAPS1.550e-4358.21Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A482RNX1_9ARCH1.580e-4353.90RRM domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A7S2Y5J5_9STRA1.290e-4145.64Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
K0T133_THAOC1.550e-4150.61Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
H3G5S5_PHYRM2.010e-4154.61Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 591..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..102
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 65..495
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 122..203
e-value: 1.1E-7
score: 41.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 122..204
e-value: 1.3E-20
score: 75.0
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 65..495
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 121..207
score: 10.803629
IPR034261CNOT4, RNA recognition motifCDDcd12438RRM_CNOT4coord: 116..215
e-value: 1.47405E-43
score: 150.767
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 121..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig779contigP-littoralis_Contig779:85904..100089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig779.23.3mRNA_P-littoralis_Contig779.23.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig779 84695..100474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig779.23.3 ID=prot_P-littoralis_Contig779.23.3|Name=mRNA_P-littoralis_Contig779.23.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=853bp
MDLAQQDACSSSYRDEFSVEDYRHAENGPRIIPGSTVMSMEPTMCSSSSV
GSTSSRCETPPQEHQQQQQQCNHARVQQYHQRQALMSGQSGSEQQQQQQE
GVFIRGADRRTLQNLRVIRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEV
AKLVINHHQGVAQDDPRYGSASAYVTFRRQEDAWAAICSVDGFRIMGRTI
RASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQEDRFTKDEVQLGLARHG
SSFGFKEAVLGERGDADHGGESPTGTPGLRSGGQTLGGARKQPANPVFPP
PCAMPPASFQQEGTCTRYQQRAGGGHHRHSNNVVGNGACGHAAPPLPPPS
AHAYHSCGDDQENDGGGGGIGDSPGRTKAYPGADAKLHLPLDGPGGGGDD
TPRPRRRRGQRGRRRAGNRVRCDLSSDNLDGLHGVSVGGGEGYGYPVGPD
EYEERLVGPPSLECFFDARGGSGDSGGDGGGLSNSNGILYRPVPRLTQTF
GCNDRSPGSASSSAHSNGGGGGSSRSPVTTPETLSNTPPSALLQQDATRT
SFLGVGNRTTPPLAREVWNQTQYQHLPRPAPTFFGMEEAGARRETVSADQ
LQKQQQQLQQQLQQQQEELLQLRRQHYLYEGGASGVGGMVSRDVLAVSKT
RQGLRLQHLQDEQQRFRQQQQLHGGHIDERASIVSLQLQVRELQRYLESK
NGVASGSGTGPPASFLPPGLGLTDGSNGGGGGGGGLPGDSSSCSYRCPDD
VSSVGDRLAALSWGNDSDNNTASGIKNVLACPQQQGDRRAEAEGSIYCLG
AGRDGRDGADYNEAYWGATPSPFAGFGSLVPALAVSQAEASQWRRATPRL
ST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039780Mot2
IPR000504RRM_dom
IPR034261CNOT4_RRM
IPR035979RBD_domain_sf