prot_P-littoralis_Contig779.16.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig779.16.2
Unique Nameprot_P-littoralis_Contig779.16.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length425
Homology
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BLAST of mRNA_P-littoralis_Contig779.16.2 vs. uniprot
Match: D7FX17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX17_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.270e-34
Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 0 
Query:  123 DSSDTRGQVDVILDLVCTESAKAWPTLKRIVRDQRDRVDFVLHILPLSDGYPVGYFAAKAVQVILANADGGGTYDDVETFVDQVFRGQVVIL-DDEGTDSSFD-ATKVVSEWAMSTSGMTEELFFSAMQDPAFDEAVLGDLEKYLTLSMPDAPAVVLNDVFAMELGENKNLRYFEIFI 298
            D    + +VDV L L C +SA+AWP LKR   DQR+ VDFV HILPLSD  P+ Y AAKA QV+LA A  G T D VE FVD +F GQ  I  D +G D + D A  ++ +W +S S +  ++F SAM+DP FD  VLGDL    T ++   P+VVLN  F M L  ++ LR F++F+
Sbjct:   56 DQLGQKVKVDVFLGLGCEKSARAWPVLKRAASDQRNSVDFVFHILPLSDD-PIVYSAAKAAQVLLAYA--GETSDGVEGFVDLIFLGQEAIHGDQQGMDLTVDEARDIIGDWPLSFSSIPADVFHSAMRDPLFDPIVLGDLGNIFTAAVSGTPSVVLNGNFIMLLCGDRGLRDFQMFL 230
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BLAST of mRNA_P-littoralis_Contig779.16.2 vs. uniprot
Match: A0A6H5JDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.140e-21
Identity = 67/170 (39.41%), Postives = 91/170 (53.53%), Query Frame = 0 
Query:  130 QVDVILDLVCTESAKAWPTLKRIVRDQRDRVDFVLHILPLSDGYPVGYFAAKAVQVILANADGGGTYDDVETFVDQVFRGQVVILDDEGTDSSFD-ATKVVSEWAMSTSGMTEELFFSAMQDPAFDEAVLGDLEKYLTLSMPDAPAVVLNDVFAMELGENKNLRYFEIFI 298
            +VDV L L C +SA+AWP LKR   DQR+RVDFV HILP+SD  P+    AKA+             DD                D +G D + D A  ++ +W +S S +  + F SAM++P FD  VLGDL    T ++   P+VVLN  F M L  +  LR F++F+
Sbjct:   10 KVDVFLGLGCEKSARAWPILKRAASDQRNRVDFVFHILPVSDD-PIVLSTAKAI-------------DD----------------DQQGMDLTVDEARDIIGDWPLSFSSIPADNFHSAMRNPLFDPIVLGDLGNNFTAAVSGTPSVVLNGHFIMLLCGDTGLRDFQMFL 149
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BLAST of mRNA_P-littoralis_Contig779.16.2 vs. uniprot
Match: A0A6H5L763_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L763_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.080e-9
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:  130 QVDVILDLVCTESAKAWPTLKRIVRDQRDRVDFVLHILPLSDGYPVGYFAAK 181
            +VDV LDL   +S +AWP LKR   DQR+RVDFVLHILP+SDG P+ +  AK
Sbjct:   10 KVDVFLDLGNEKSTRAWPILKRAASDQRNRVDFVLHILPVSDG-PIVFSTAK 60
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig779.16.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX17_ECTSI1.270e-3448.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDZ3_9PHAE1.140e-2139.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L763_9PHAE1.080e-961.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 354..374
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 121..294
e-value: 5.1E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..390
NoneNo IPR availableCDDcd02972DsbA_familycoord: 131..183
e-value: 0.0020077
score: 35.4592
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 124..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig779contigP-littoralis_Contig779:64624..81659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig779.16.2mRNA_P-littoralis_Contig779.16.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig779 64591..82022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig779.16.2 ID=prot_P-littoralis_Contig779.16.2|Name=mRNA_P-littoralis_Contig779.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=425bp
MMEVIRATNDHPGHPSGGRHYGTTAVYNNSSWSPSRRGGNLIMTNGTTTS
RRFSSVAALLRLLLIISSSSWTASTVTAAELQQQQSAGGGGVEQLPLLLH
HTPSYHAARKAGGGVAAFLRSSDSSDTRGQVDVILDLVCTESAKAWPTLK
RIVRDQRDRVDFVLHILPLSDGYPVGYFAAKAVQVILANADGGGTYDDVE
TFVDQVFRGQVVILDDEGTDSSFDATKVVSEWAMSTSGMTEELFFSAMQD
PAFDEAVLGDLEKYLTLSMPDAPAVVLNDVFAMELGENKNLRYFEIFISS
RGEGDVGFSSTSDLTEYHYDFFYDDDQEDDLSGLLPPVSGEMGRETGTGE
FENAKRLQQQQQLLHEKKAEEQHNSLFPAGAQEEEEEEAAAAAAAAGAVA
AVEQLLQRLAEGLPPYSPGLVLTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf