prot_P-littoralis_Contig776.37.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig776.37.1
Unique Nameprot_P-littoralis_Contig776.37.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length164
Homology
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BLAST of mRNA_P-littoralis_Contig776.37.1 vs. uniprot
Match: A0A6H5J849_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J849_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.170e-22
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0 
Query:    4 LFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVS--CRQPARKGVSKQVGSDNMFSLQELSELFASKQSLAAFTAGRVAPMVRDTKVAAVAPLGYIHSVVPEPALELSHPRVAAFQNQVASTPG 164
            L+ R+ +VL+PNPF+RNGVS++L +     + S+  LR+E HDP G AM  RGV  +KLF++F GVLSA++ S     P RK + K  G D +F++ E   LFA+  + A      + P V     +A+AP     + VP P +    P+VAA+QN+ A+ PG
Sbjct:  201 LYDRVVEVLLPNPFDRNGVSAILHETAYETTSSLGPLRMEWHDPLGEAMARRGVTAEKLFRKFVGVLSARNASYITPPPPRKHL-KVAGPDRLFTMAEARSLFANSGTGAP---SALPPPVLTQPFSALAP-----APVPAPPVA---PQVAAYQNRTATAPG 351
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BLAST of mRNA_P-littoralis_Contig776.37.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.360e-15
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:    4 LFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVSCRQPARKGVSKQVG 90
            L+ R+ +VL+PNPF+RNGVS++L +     + S+  LR+E HDP G AM  RGV  +KLF++F GVLSA++ S   P  +     +G
Sbjct:  190 LYDRVVEVLLPNPFDRNGVSAILHETAYETTSSLGPLRMEWHDPLGEAMARRGVTAEKLFRKFVGVLSARNASYITPPPRDADASLG 276
[Close]
BLAST of mRNA_P-littoralis_Contig776.37.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.870e-10
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:    4 LFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVS 76
            L+ R+ +VL+P PF+RNGVS+ L       + S+  LR+E HD    AM  RGV  +K F++F GVLSA++ S
Sbjct:  373 LYDRVVEVLLPTPFDRNGVSAKLHGIAYETTSSLGPLRMEWHDLLEEAMARRGVTAEKFFRKFVGVLSARNAS 445
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig776.37.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J849_9PHAE2.170e-2240.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEH2_9PHAE2.360e-1544.83RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KZY5_9PHAE3.870e-1045.21Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig776contigP-littoralis_Contig776:73247..73738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig776.37.1mRNA_P-littoralis_Contig776.37.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig776 73247..73749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig776.37.1 ID=prot_P-littoralis_Contig776.37.1|Name=mRNA_P-littoralis_Contig776.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp
MRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGV
AMVSRGVETQKLFKEFAGVLSAQSVSCRQPARKGVSKQVGSDNMFSLQEL
SELFASKQSLAAFTAGRVAPMVRDTKVAAVAPLGYIHSVVPEPALELSHP
RVAAFQNQVASTPG
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