mRNA_P-littoralis_Contig771.20.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig771.20.3
Unique Name	mRNA_P-littoralis_Contig771.20.3
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.190e-64
Identity = 113/151 (74.83%), Postives = 125/151 (82.78%), Query Frame = 1

Query:  118 MSREPAGESPLGGASATGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDLLRASEAEAK---EGQDNSNDEEDGVESDGALVKPSPASVGAGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            MSR+  GE P G A A GNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATD LRASEA  +   EG+      +DG ++ G+LV+P+PASVGAG+ LLP DQAQQME RIE MGYEVGYRLVER CQRRWMGG+QLEAIKFVCKDLWSD+
Sbjct:    1 MSRDATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDL 151

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.360e-8
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 1

Query:  418 AQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            A+ +  R+EGMG+EVGYR VER  Q+R +  E LE IKF+CKD W++V
Sbjct:   11 AEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEV 58

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.800e-7
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  436 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            R+E +G++VG RL ER CQ + + GE LEA+KF+CKD W++V
Sbjct:   67 RLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEV 108

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A1Y1IG54_KLENI (Transport protein particle (TRAPP) component n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IG54_KLENI)

HSP 1 Score: 55.5 bits (132), Expect = 1.180e-5
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 1

Query:  436 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            R+E +G++VG +LVERA + R    + LE IKF+CKDLWSDV
Sbjct:   38 RVEAIGFQVGQQLVERATKERPRFADHLEVIKFICKDLWSDV 79

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN)

HSP 1 Score: 54.7 bits (130), Expect = 2.440e-5
Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 1

Query:  388 AGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLW 552
            +G+  +  ++ +++ +R+E MGY VGYR VER+ + R    E L+ IKFVCKD W
Sbjct:   42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFW 96

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: K3WA95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA95_GLOUD)

HSP 1 Score: 54.7 bits (130), Expect = 2.700e-5
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1

Query:  376 ASVGAGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLW 552
            A++ +G   L  ++ +++ I++E MGY+VGYR  ER+ + R    E L+ IKFVCKD W
Sbjct:   45 ANLESGAIELAKNKKEELTIKLEAMGYDVGYRFAERSAKDRPRMLEPLDVIKFVCKDFW 103

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A7S2RK51_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK51_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.160e-5
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 1

Query:  385 GAGNHLLPPDQAQQMEI-RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            GA    L PD  ++  + +I+ +G+ VG R VER  Q+R +  EQLE +KF+CKD W ++
Sbjct:    1 GASPSSLAPDAGEEWVLGKIDQLGFTVGSRFVERVGQQRALAHEQLEVMKFICKDFWHEL 60

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A1X6PF38_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PF38_PORUM)

HSP 1 Score: 54.3 bits (129), Expect = 5.200e-5
Identity = 33/89 (37.08%), Postives = 44/89 (49.44%), Query Frame = 1

Query:  355 ALVKPSPASVGAGNHL---------LPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDVRIKNHFVFVHT 594
            A V P P++V  GN L                +   R+EG+GY+VG+RLVER    +      LEA+KFVC+D W  V  K H   + T
Sbjct:   37 AYVPPVPSAVPDGNALPXXXXXXXXXXXXXXXETRRRLEGVGYDVGHRLVERYAVEKERMDSDLEAVKFVCRDFWEGV-FKKHVDVLRT 124

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A0K1ETW9_9ROSI (Trafficking protein (Fragment) n=1 Tax=Ceriops decandra TaxID=172013 RepID=A0A0K1ETW9_9ROSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.270e-5
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1

Query:  436 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            RIE +GY+VG++L ER    R    + LEAIKF+CKD WS+V
Sbjct:   10 RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSEV 51

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BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: UPI001CB89A0E (trafficking protein particle complex subunit 6B-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB89A0E)

HSP 1 Score: 53.1 bits (126), Expect = 6.680e-5
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 1

Query:  433 IRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 561
            +RIE +GY+VGY+L ER    R    + LEAIKF+CK+ WS++
Sbjct:   35 LRIEAIGYQVGYQLAERYTMERPRFNDHLEAIKFICKEFWSEL 77

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18


Match Name	E-value	Identity	Description
D7G8M3_ECTSI	1.190e-64	74.83	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2UTW2_9STRA	1.360e-8	56.25	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A835ZD08_9STRA	5.800e-7	54.76	Transport protein particle component, Bet3 n=1 Tax...	[more]
A0A1Y1IG54_KLENI	1.180e-5	57.14	Transport protein particle (TRAPP) component n=1 T...	[more]
A0A2D4BMC0_PYTIN	2.440e-5	43.64	Transport protein particle component, Bet3 n=2 Tax...	[more]
K3WA95_GLOUD	2.700e-5	42.37	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A7S2RK51_9STRA	3.160e-5	41.67	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A1X6PF38_PORUM	5.200e-5	37.08	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A0K1ETW9_9ROSI	5.270e-5	54.76	Trafficking protein (Fragment) n=1 Tax=Ceriops dec...	[more]
UPI001CB89A0E	6.680e-5	51.16	trafficking protein particle complex subunit 6B-li...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig771	contig	P-littoralis_Contig771:119090..125496 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	2880.D7G8M3
Preferred name	TRAPPC6B
PFAMs	TRAPP
Model size	960
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC02795
KEGG ko	ko:K02321,ko:K04706,ko:K20304
KEGG Reaction	R00375,R00376,R00377,R00378
KEGG Pathway	ko00230,ko00240,ko01100,ko03030,ko04120,ko04630,ko05160,map00230,map00240,map01100,map03030,map04120,map04630,map05160
KEGG Module	M00261
Hectar predicted targeting category	other localisation
GOs	GO:0000045,GO:0000407,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005793,GO:0005794,GO:0005801,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010506,GO:0010508,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0016239,GO:0016241,GO:0017016,GO:0017112,GO:0017137,GO:0019222,GO:0019899,GO:0022607,GO:0030008,GO:0031267,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031503,GO:0031982,GO:0031984,GO:0032438,GO:0032991,GO:0033036,GO:0033059,GO:0034497,GO:0034613,GO:0034629,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043473,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048518,GO:0048522,GO:0048753,GO:0050789,GO:0050794,GO:0051020,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0090114,GO:0097708,GO:0098772,GO:0098791,GO:0099023,GO:1903232,GO:1905037,GO:1990070,GO:1990071,GO:1990072
Exons	2
Evalue	1.95e-65
EggNOG OGs	KOG3316@1\|root,KOG3316@2759\|Eukaryota
Ec32 ortholog description	NO signalling/Golgi transport ligand-binding domain
Ec32 ortholog	Ec-09_002340.1
Description	ER to Golgi vesicle-mediated transport
Cds size	960
COG category	S
BRITE	ko00000,ko00001,ko00002,ko03032,ko04121,ko04131,ko04812

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791593.996701-CDS-P-littoralis_Contig771:119089..119641	1680791593.996701-CDS-P-littoralis_Contig771:119089..119641	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig771 119090..119641 -
1680791594.014636-CDS-P-littoralis_Contig771:125088..125496	1680791594.014636-CDS-P-littoralis_Contig771:125088..125496	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig771 125089..125496 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig771.20.3	prot_P-littoralis_Contig771.20.3	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig771 119090..125496 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig771:119090..125496-
coding sequence from alignment at P-littoralis_Contig771:119090..125496-

protein sequence of mRNA_P-littoralis_Contig771.20.3

>prot_P-littoralis_Contig771.20.3 ID=prot_P-littoralis_Contig771.20.3|Name=mRNA_P-littoralis_Contig771.20.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
ATVRCGVKTGQSQHSSVGAALCRSTRSEAQAVARQEITIMSREPAGESPL
GGASATGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDLLRASEAEA
KEGQDNSNDEEDGVESDGALVKPSPASVGAGNHLLPPDQAQQMEIRIEGM
GYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDVRIKNHFVFVHTRR
CSSLLLYLLNVTDSSEIGDLRCEAIEGLQGLVVRCELREQQFCSLLSRTF
YDAASAVRSGLVISPINVFTKHFELQYFVYSYDSFLKFFDVAFGGITLYA
SCIASVFLFVVSFFFLRRWV

mRNA from alignment at P-littoralis_Contig771:119090..125496-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig771.20.3 ID=mRNA_P-littoralis_Contig771.20.3|Name=mRNA_P-littoralis_Contig771.20.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6407bp|location=Sequence derived from alignment at P-littoralis_Contig771:119090..125496- (Pylaiella littoralis U1_48)
GCAACGGTGCGGTGCGGTGTGAAAACAGGCCAGAGCCAGCACAGCAGTGT
AGGTGCTGCTCTCTGCAGGTCTACGCGCAGTGAAGCCCAAGCAGTAGCAA
GGCAAGAAATCACCATCATGTCGAGGGAACCCGCCGGGGAATCCCCTCTG
GGTGGGGCATCCGCGACGGGGAACAGGCTCGTCTCCGAGCCTGCTTTTGA
GCTCTTGTTCTCCGAAATCATCGCCTACACCGGAGCATACGTTTCGCATT
CGGCAGCAAGCCACGCCACGGACTTGCTCCGAGCCTCGGAGGCAGAGGCG
AAGGAGGGGCAAGACAACAGCAATGATGAAGAGGACGGGGTTGAGTCTGA
TGGAGCGCTGGTGAAGCCGAGTCCGGCGTCGGTTGGGGCCGGAAACCACC
TGCTCCCGGTGAGCCTTTTCCTACTAACTGCTGTGTGGAACCAATTACGC
CGCCGTCCTCAGAGGTCCTTACAGCGGAACACATGACGAGGAACGAAGGA
ACCACATCCCAAGGACTGTAAATGCATTTATCAACATGCCAAGCAAGCAA
CCAACAGCAGACAGCCTGGCAGACTATCTGCACTCACGGACCGGGTTAAC
GCATTTTGGCACTCTGTGTCCACATGTGGGGATATTTCGAGGACACGTCC
TTTTTCTTTTTTTTTCTTACAAAGACATCAGTGTGTTCTCCTCTCCTAGA
TGAGGATCCATTTTTGAAAGTCACCGGGGCATGGATTGGAAAAGCTCTGC
GTTCTTTCGACAAACGCCTGATTATTCTTGGTTTACAGAATCTAATATGA
TAGCAACTCCTACACCGCGTGGTAGAGTGCTCCCAGAGGCGGTCCCTCTA
CATCCAATCTCTAAAATCCAAGTCCTGGCGACATGCTTTTTTTAAGTCAC
CTTGCAACGGGTTCAAGGAGCTCTGCGGACTTTCGACAAACGCCTGGTTA
TTCTGGGTTTCCAACTTTCTCTTTAGGTACAAATCTACCAAGGTTAGGGT
TCATACCTAACGTATCAAAACAACGGGTAGAGTATCGAATATCGGACTCA
CCGTACCCAAACAAACGGATGGGTTTTCAATTTCGGACTCAACGCACCCA
AACAAACGGGTAGGGTACGAAATGTCTTACCCAAACAAACGGATAGGGTA
TTTCTTGTTTATTTTTACCCAACGTAGCCAAAAAAACGGTAGGGTTTTGA
ACGTCGGACAAAAACCGGTCGCCGCGGTGGTGTAGTGGTTCCCTCGTTAA
TCTACTAGTTGTGAGGTCGTAGGTTCAATTCTCTCTGAGAGCGATTCTAG
CGACTTTACAGCAGTGGAAATCGAACTACTCGTGAGTAAACAGAGGGAAG
GGATTGCTGTGCCCGACTCGCATTAAAAACCAAAGGCACGTGCCTCAAGA
GGAAGGTTGGGGCAATTAAACAAAACAAAAAACAAAAATGCTCGTGTCTG
GCCTTCCTTCTGTGTGACCTCGGCTGATGCACCCACTTCACACCGAAAGG
TGTAGACTGCTGCCCAGAATAAATGGGATGACAATACACACAACACACAC
ACTCAACGTATCCAATAAAACGGGTATGATGTAGGGTATTTAATGTCGGC
CTCAACGCATTCCACAAAACGGGTAAGGTACGAGAATCATACCCGATTTC
ACCCGGGTACTACCCGAGCAAGATAAAATACTTATAAGTACCTGGGTAAA
TCAGCTAGGGTGAATTGGCTTTCTTCACGGGAATATACAGCAGTTTGGCG
GGAGGGATGGTCTGATATGCCCATCTCAACTTTCCACTCCATTAAGGTTT
GTGAGGCTTGTCGAGAGTGCCCCCGAGGGGCTCTGTCCCTCAATCCTACA
TTTCAGTCATTTCAGCCTCAACCACTGCCACGCTTCGCAGTTCCATTCTT
TCGACCATAAAAACATGCCTCGAAGCACAAGCTTTCCGATTTTCAGGTCG
GTAATTGTCCAGGCCAGTCGCTGTGAGAGCTGACTGTTGAGAGAGCTGTA
TGACGTTAGACAGGGTGTTCATTATCCTGAACAGCCTGTCACTCAATATG
TGATAGCAAGATGCCCGGCTGGACGCTACTGCAGTGAAGATCGGCCGCCA
GAAGGAAAGCGGAGACAGCTGTGCTGCAGTCAGTCACAGCAGCGCAGACA
CAGCAACACACACACAACATACCCACTGCTGTTCCTGCTGCTCTACAGCA
GCAGCAGGGTGTGATGTGAGTGTGATGTGTTTTAACAAACACCCAACACA
CGCCGACTAACCGACTCTCGGCTGCTGCTGATGTGGGACTGATGTGATGC
CGTTAGTCGCAGAAGAGCCAAAACACATCACACGCACAACACACCCACTC
ACTGCTGCTGTACAGGAATCAACACAAGAATGAATATGTTGGCCCCTCTT
GCAGCAGGACAGGAACCAACGCGACAATGCGTTAGCTCCTCTAGCAGCAG
CTTAGAGCTGTGTGTGGGTGTGTGGTGCGCGTGATGTGTTTTGGCTCTTC
TACATCTAACGGCAACAGCAGCAGCAGCTAGCGAGCTGTGTGTGCGTGTG
TTTGTTGTTTGTCTCCTCTGTCGCTATCCCTGACAACAGTTCGCAGTTCC
TTCGCCTAATCCGGCACCCGTCACCAATACTACTGTAAAGACAGCCGGGA
GACTCATCGTGTTGGCTCTTCTACAGCTAGCAGTAGTGTGTGTACTGCTG
TGTGTATGTGTGTGTTGCTCTGACAGCACCAGCAGTCAAGTGTGGGTGGT
GATGCGAACTAACTGGAGTTACGTCTTTCCGTCATTCGGCGCCCAGACCA
TAATTCCCTTGGCCAAGTCTTTCAAGTTCAAATTCTGGGTGAACGGAATC
TCTTATCCACCGTGTTTTGTTTTGTTTTTCAAGAAAGAAAATTGAAAATT
TGAGAATCGAAATCCTTTGCGTCGTTGCTGGTCTGTGGTATCATATATTG
TCTTGGGTGAATAGCAAGGTCTGAATATTGTCTCCCTCCAGACTTGCGTG
CAGTAGAGAACCGTCACCCGTGTTTACATTCGTCTTGAATCACCCGCTCC
TTCTGACCAAGTTCGCGCATTTACCTACTCCCGAAGAGGATCTTGTATTT
TGTGCATGTACCTATATTCCGCAGATGATTAAAAGGCTGAAAATCTCGCC
GAGAACCCTTCTTGCAGCGGAAGGTCGATCGCCTCGGCATACGCTGTCGC
GCCGAGCCACCAGCTGATCTCGCGGCCGTGTTACGCCTTTTTAATACGTG
GAAGCCTTCTGCCCGACGTATCGGTACGCCACACCCTTCGACTTCCAGCC
CGAAAAAGGCCATCAGAGCATCGACCGCCGTACAAGCCGTCGGGTATCCT
GGAATACCCTTACCGGCCCCGGTTTATTTCCTTCAGTACCCGACCTGGTT
GGACATTTCGTGTCATACCCAACGCAGTAACAAAAAACTGGTAGGGCATG
CAGTGTCGGACTCGCCGTACCCAAACAAACGGGTAGGGCTTGTACTGTCG
GACTCAACGTATTTAGCACAACGGGTAGGGTATTTAATGTCGGACTCAAA
GGACACCACGGACGAATAGGGTGCGTACCGGGTAGTAATTTACCCGGGTA
CGCGTTATTCCCTATCCTACCCAACACACCCTGGAGATCTGCCATCGCAG
AGTACTACCAGAGGCAGTCGCTGTGAACTGTGAACGGTATCTAGCGTGTA
GGATCCCAAGTCCTTACGACATTCTACGGATTCGCCGTCTGTGATTTTTT
AAACGAGCCCTCCTTCATCGAGTTATGTGTTCTGCAAGGCTTGCTTCGGA
TGCTGCTGCAGCGGCCATATTATCAAATGTTTCCAGCACACAACGCTCGA
AAAAGCTAGACACAGGGCAATACTGAGTTGCCTTCGGCCTGCAAGTCAAT
CGCGGCGATGGGTAGGGTAGGCGCGGAGACAATTCTGCTGAATTACGATA
GCGGTCGCAGATACCCACGCGTGCTTTGCTTTTTCCGGTGCTGTGCGCTG
AAGGCGTTCAAAATGGAGCCGCTACAACAGCGCTTAAACTGCCGGTTCGC
CTCGTAGCTTACAGAACTCGATGGAGGGAGGCTCGTTTCAGTAAGACGAA
AACAAGAATCTGCAGTATTTCGTACGAAGTACTTCGTATTGTATGCCACA
AGGTGTTTGGTTGCATACGCTTGGCATCGGTCACAGCTCCTGCCTGTGGA
AGCGCTCCGCCACGATAGATTCGTACGTATTAAAGATGGAGGTTGCAAAC
CCTTATGTGAACATCCGAGGTCACGGAGGAGCCTTGCGGACTTTCGACAA
ACGCCTGATTATTCTGGGTTTCCAGACTCTTTATCTGCCAGTGCTGTATT
CAGACACATAGTATGATAAAAGCATGTACACTTCTGCCACCATCACCAAA
ACACGCCCGTAGAGGCAGTCGCTGTGATCGATAACTCGTGCCCAGGATCC
AAGGCCTTGCGATATGCTTGAAGATTCCTCGTTTTATTTTTATTTTTTCA
ACGGGCCCTCACTCATCAATTTATGTAAGCTACGGTAATTTTGACGCTGC
TGCAGCAACCAGCCATGTTGAAGCACTTGCTTTTGGCTTTTCCCTGGAAA
AAATATTTGCCTCTCGGGAGGTTGGTTTTCGTGATTCGACGAAGCAGAAC
AGGGAGTTGGTGGGACAGTCTGAAAGCCGCCGCCAAACGTCTGGTGCATT
TCGCTCGAAAAGACCGACAGCTCGGACCTAGCACCAGCACTCTCCTGCTG
GGGCTCACCCCAACCTACAGAAATACGCACCGTGCATGCACACGCCGAAA
TGGCTGACGTGAAAGAACCTGGGGTTTCTATTTGTATCGCGTCAGCACCG
GCCTAGTAAACACCCTATCGGCCAACCAAAGGTCGAAACAAAATCGAACC
ATTTATCGCCGGATTGCTCAAATTGAGGCCTACGATCCGGGTGTAAAAGT
TTTTGTTGAAGGCCCGGCCTCATTTAATTGCTGCACAGCCGTTTTTTCCC
AACGGCAAGTCTTTTTGCAACAATACAGCCTTGTCATCATGAAGCTGGTA
CGCCTTCTTACAACTGTTGACAGCTAAAAGCAGCAGGAGTAGAGCCTTGG
TCCGGCCGGCCACCTTGTCGAAGGAAACCTTCTTGTGTTTTGGATCTCTA
GCCGAAGGCCCAGCATTCCAGCATCCCAGTCTAGTCTCGTCCAGGGCACG
ATAAGCTCCCTTTCTTTCTGAACTACTGTACATAAAAGTGTCGAGAATGT
TCTTGGAAGAACTTTTTGTTTTCCTGGTTCGTGTTGTTCCTGCGCTAGAG
GCACCCGTGGCACATGGATCCTGCAGCAGCTGAAACCGTCTCGCTCTTTA
TCGTATGTACAGAGTTTGCCAGATATGTAAATTGTACGGGGTATGCAGCA
GCAGTATTTGGCTGCTCGAAAACTGAAGCGTTGGTGGGCGTGCACCCGCC
CTCCCCTGGCCAATTCGGGTCGAGCCGCAAAAAGTGCGTTTTGATTTACA
CGGGTACCCTGAGGCCACCGGGGTTTGGCTCATTTTTTATCATTGGAAGT
GCGAAGAGAGAAGAGATTCACACAACGCGATTCTTTACTTTACTTTTTAG
GGCATGGACTACCTCCCCCCCCCCCCCCTGCGCGTGGATCGAGATCCCGT
GCGGCCCCCACGCCCAAAGCACTTCCAGTTGACCGCAGATGCGATGTGTA
CAGCAATCCTTCAGCTGGGGACCTCATTTTTGCTTTTTGTTTCAGTCGTC
ATCGCATCCTGTGTGCTTTGCGCGTGTTTATGTGTGTGCGTGCTTGTTAC
GTTTTTTCGATTTCCCCTGACGACCGCGGCGAAACTTGGGAAAAAAAAAA
TTAAGCCGGACCAAGCGCAGCAGATGGAGATCCGGATCGAAGGCATGGGC
TACGAGGTGGGATACCGGCTGGTGGAGAGGGCCTGTCAGAGGCGCTGGAT
GGGCGGAGAGCAGCTTGAGGCGATCAAGTTCGTCTGCAAGGACTTATGGT
CCGACGTGAGAATCAAGAACCATTTCGTATTTGTGCACACACGTAGGTGC
AGTTCACTGCTGCTGTATTTGCTGAACGTTACCGACAGCAGTGAAATCGG
AGACTTGCGTTGTGAGGCGATAGAAGGACTGCAGGGACTTGTAGTCCGAT
GTGAGCTCCGAGAACAGCAGTTTTGCAGCTTGTTGTCACGAACTTTCTAT
GATGCTGCTTCTGCAGTGCGCTCCGGTCTTGTCATCTCGCCCATAAATGT
TTTTACGAAGCATTTCGAACTACAGTACTTCGTTTACTCGTATGATAGCT
TTCTCAAGTTTTTCGACGTTGCATTTGGAGGAATTACGTTGTACGCTTCC
TGCATTGCCAGTGTATTTTTGTTTGTCGTATCATTTTTTTTTTTAAGGCG
CTGGGTG

Coding sequence (CDS) from alignment at P-littoralis_Contig771:119090..125496-

>mRNA_P-littoralis_Contig771.20.3 ID=mRNA_P-littoralis_Contig771.20.3|Name=mRNA_P-littoralis_Contig771.20.3|organism=Pylaiella littoralis U1_48|type=CDS|length=960bp|location=Sequence derived from alignment at P-littoralis_Contig771:119090..125496- (Pylaiella littoralis U1_48)
GCAACGGTGCGGTGCGGTGTGAAAACAGGCCAGAGCCAGCACAGCAGTGT
AGGTGCTGCTCTCTGCAGGTCTACGCGCAGTGAAGCCCAAGCAGTAGCAA
GGCAAGAAATCACCATCATGTCGAGGGAACCCGCCGGGGAATCCCCTCTG
GGTGGGGCATCCGCGACGGGGAACAGGCTCGTCTCCGAGCCTGCTTTTGA
GCTCTTGTTCTCCGAAATCATCGCCTACACCGGAGCATACGTTTCGCATT
CGGCAGCAAGCCACGCCACGGACTTGCTCCGAGCCTCGGAGGCAGAGGCG
AAGGAGGGGCAAGACAACAGCAATGATGAAGAGGACGGGGTTGAGTCTGA
TGGAGCGCTGGTGAAGCCGAGTCCGGCGTCGGTTGGGGCCGGAAACCACC
TGCTCCCGCCGGACCAAGCGCAGCAGATGGAGATCCGGATCGAAGGCATG
GGCTACGAGGTGGGATACCGGCTGGTGGAGAGGGCCTGTCAGAGGCGCTG
GATGGGCGGAGAGCAGCTTGAGGCGATCAAGTTCGTCTGCAAGGACTTAT
GGTCCGACGTGAGAATCAAGAACCATTTCGTATTTGTGCACACACGTAGG
TGCAGTTCACTGCTGCTGTATTTGCTGAACGTTACCGACAGCAGTGAAAT
CGGAGACTTGCGTTGTGAGGCGATAGAAGGACTGCAGGGACTTGTAGTCC
GATGTGAGCTCCGAGAACAGCAGTTTTGCAGCTTGTTGTCACGAACTTTC
TATGATGCTGCTTCTGCAGTGCGCTCCGGTCTTGTCATCTCGCCCATAAA
TGTTTTTACGAAGCATTTCGAACTACAGTACTTCGTTTACTCGTATGATA
GCTTTCTCAAGTTTTTCGACGTTGCATTTGGAGGAATTACGTTGTACGCT
TCCTGCATTGCCAGTGTATTTTTGTTTGTCGTATCATTTTTTTTTTTAAG
GCGCTGGGTG