mRNA_P-littoralis_Contig771.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Match: D7FLR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR6_ECTSI) HSP 1 Score: 343 bits (881), Expect = 2.220e-112 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 1
Query: 25 GGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTKSDRFSWKLDDHDNLILPVHNSNSYGGKHPRCQIGGVVPVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKRAQK 543
GGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVT SDRFSW LDDHDNLILPVHNSNSYGGKHPRCQIGGVV VERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKRAQK
Sbjct: 487 GGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTNSDRFSWTLDDHDNLILPVHNSNSYGGKHPRCQIGGVVLVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKRAQK 659
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.360e-74 Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 1
Query: 46 GANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTKSDRFSWKLDDHDNLILPVHNSNSYGGKHPRCQIGGVVPVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKRAQK 543
G + VG AP+N AAA R+ IP P+PA+A GFCFG+GADG GLA KLKQLFAGENGFG+GPITT GC+ PKFGEAGVTKSDRFSW+LD+ LILP HN+N+ GGKHP CQIGG VPVE+V GSWRLC WA YVSTGRVVQ+ITHN RHN A QK KKRA K
Sbjct: 389 GESVVGGAPSNGAAARLRKHIPDPPNPAKARGFCFGIGADGVGLAEKLKQLFAGENGFGKGPITTKGCHTPKFGEAGVTKSDRFSWQLDEDGCLILPPHNTNNPGGKHPTCQIGGTVPVEKVNGSWRLCSWALPYVSTGRVVQKITHNARHNNAPQKSRGKKRALK 554
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI) HSP 1 Score: 204 bits (519), Expect = 7.720e-60 Identity = 105/171 (61.40%), Postives = 125/171 (73.10%), Query Frame = 1
Query: 22 IGGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTKSDRFSWKLDDHDNLILPVHNSNSYGGKHPRCQIGGVVPVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKR 534
+ GA LGTGANQVGSAP++ AAA R+ IPG +P RA+GFCFG GADG GL KL FAG+NGFG GPIT GC P F EAGVTK + +W+LD+HDNLILPVH+S G HPRCQ+GG VPVE+V SWRLC WA +Y+ R+VQ+I+ +QRHNGA K K R
Sbjct: 384 VAGAALGTGANQVGSAPSDGAAAKMRKPIPGQLNPVRAHGFCFGFGADGVGLPQKLHDKFAGKNGFGDGPITEGGCEIPNFSEAGVTKG-KSTWQLDEHDNLILPVHSSIETEG-HPRCQLGGCVPVEKVNESWRLCHWALKYILARRIVQRISQSQRHNGAPAKSRAKGR 552
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE) HSP 1 Score: 193 bits (491), Expect = 2.190e-55 Identity = 98/163 (60.12%), Postives = 114/163 (69.94%), Query Frame = 1
Query: 46 GANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTKSDRFSWKLDDHDNLILPVHNSNSYGGKHPRCQIGGVVPVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKR 534
GANQVGSAP+N AAA R+ IPG +P + YGFCFG GADG GL KL FAGENGFG GPIT GC P F EAGVTK + +W+LD+HD LILPVH+ N G HP C IGG VPVE+V SWRLC WA +Y+ R+V ++T N RHNGA +K K R
Sbjct: 437 GANQVGSAPSNGAAAKVRKPIPGQRNPVKEYGFCFGFGADGVGLDQKLHDKFAGENGFGDGPITEGGCEIPNFSEAGVTKGES-TWQLDEHDYLILPVHSGNKTEG-HPACTIGGCVPVEKVNESWRLCHWALKYILNRRIVSKVTQNARHNGAGEKSRAKGR 597
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.780e-50 Identity = 92/163 (56.44%), Postives = 111/163 (68.10%), Query Frame = 1
Query: 46 GANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTKSDRFSWKLDDHDNLILPVHNSNSYGGKHPRCQIGGVVPVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKR 534
GANQVGSAP++ AAA R+ IPG +P +A+GFCFGLGA G GLA KL FA E+GF GPIT GC P F EAGVT+ + W+ D+HD LILPVH+ G HPR IGG V VE+V SWRLC W +Y+ R+V +IT NQRHNGA +K K+R
Sbjct: 223 GANQVGSAPSDGAAAKMRKPIPGQLNPVKAHGFCFGLGAGGVGLAQKLYDKFASEHGFEEGPITEGGCETPNFSEAGVTEG-KSKWEHDEHDKLILPVHSGIRTDG-HPRYVIGGCVSVEKVNESWRLCHWVLKYILARRIVPKITQNQRHNGAPEKSYAKRR 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig771.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig771.10.1 >prot_P-littoralis_Contig771.10.1 ID=prot_P-littoralis_Contig771.10.1|Name=mRNA_P-littoralis_Contig771.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=182bp ISDTPGGIGGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFback to top mRNA from alignment at P-littoralis_Contig771:73683..74781- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig771.10.1 ID=mRNA_P-littoralis_Contig771.10.1|Name=mRNA_P-littoralis_Contig771.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1099bp|location=Sequence derived from alignment at P-littoralis_Contig771:73683..74781- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig771:73683..74781- >mRNA_P-littoralis_Contig771.10.1 ID=mRNA_P-littoralis_Contig771.10.1|Name=mRNA_P-littoralis_Contig771.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=546bp|location=Sequence derived from alignment at P-littoralis_Contig771:73683..74781- (Pylaiella littoralis U1_48)back to top |