mRNA_P-littoralis_Contig77.124.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig77.124.5
Unique Name	mRNA_P-littoralis_Contig77.124.5
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: D7FN87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN87_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.230e-117
Identity = 227/310 (73.23%), Postives = 246/310 (79.35%), Query Frame = 3

Query:  459 LCVCTRIHQNNADRPVDLVKVREFLDAALLYADRIAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSAAVVSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMSSKRERADKQMRALGIREGIVEHLG 1388
            LCVCTR+HQNNADRPVDLVKVREFL+ ALLYAD IAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +                                       +A VV+VFEV+PWGKFTPALNAL+G+A+RDGAELVMFQSLETTVG+DAV  MEA+MG  DLVVGAALTGHAF+GGETV LTGVTTPWNTLALW+V+KLA LGFLGVAEGLLPGVPAGVEEVTAIAALQ LLGAEHARAKLVRLPQ       V+W TAWEDE RR+WHE+KMSSKRERADKQM ALGI++G VEHLG
Sbjct:   41 LCVCTRVHQNNADRPVDLVKVREFLNTALLYADSIAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQSITLAAREAEREAPPDRAVESVGEGGGGEGR----------AAGVVNVFEVTPWGKFTPALNALLGFASRDGAELVMFQSLETTVGKDAVSGMEAYMGPADLVVGAALTGHAFRGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGVPAGVEEVTAIAALQVLLGAEHARAKLVRLPQ-------VRWHTAWEDEGRRRWHESKMSSKRERADKQMSALGIKKGTVEHLG 333

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A6H5J5G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5G9_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.030e-91
Identity = 173/260 (66.54%), Postives = 184/260 (70.77%), Query Frame = 3

Query:  459 LCVCTRIHQNNADRPVDLVKVREFLDAALLYADRIAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSAAVVSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQAS 1238
            LCVCTR+HQNNA R VDLVKVREFLD ALLYAD IAIAVG           XXXXXXX              R                                        +A VV+VFEV+PWGKFTPALNAL+G+A+RDGA+LVMFQSLETTVG+DAV  MEAHMG  DLVVGAALTGHAFQGGETV LTGVTTPWNTLALW+V+KLA LGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQAS
Sbjct:   36 LCVCTRVHQNNAHRSVDLVKVREFLDTALLYADSIAIAVGTPPPSADQHGTXXXXXXXDSTPPLLQSITLAAREAERKAPPDRGVESVGEEGGGERG----------------AAGVVNVFEVTPWGKFTPALNALLGFASRDGADLVMFQSLETTVGKDAVSGMEAHMGPADLVVGAALTGHAFQGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQAS 279

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A835Z311_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z311_9STRA)

HSP 1 Score: 179 bits (453), Expect = 8.240e-49
Identity = 127/315 (40.32%), Postives = 154/315 (48.89%), Query Frame = 3

Query:  459 LCVCTRIHQNNADRPVDLVKVREFLDAALLYADRIAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSAA--VVSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMG-VDDLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALL--GAEHARAKLVRLPQASLSLLQ-VQWQTAWEDESRRQWHEAKMSSKRERADKQMRALGIREGIVEHL 1385
            L   TR+HQN + RP+DL  V  F   AL YAD + IAVG                                                                       A S A   V V +V+PWG+FTPALNAL+  AA  GA L++FQSLET      V  +EA +    DLVVGAAL GH F  GE   +TG TTPWNTLALW V +LA LGFL V++G + GV AGVEEV AI+ LQ L   G         R  +A L  L+   W+  WED++RR WH +KM+SKR+RA  QM AL  R G V H+
Sbjct:   11 LVAATRVHQNQSSRPIDLRAVSAFFTGALAYADTVMIAVGTTDSATLASIQQTAQAAEQ----------------------------------------------------AASRAPGTVLVLQVTPWGQFTPALNALLCAAASAGAPLILFQSLETAATPALVSALEAELDPAQDLVVGAALPGHDFSPGEHE-ITGTTTPWNTLALWSVPQLARLGFLTVSDGAVAGVAAGVEEVAAISLLQQLRHSGGSGGGGSATRECRAKLLCLEGATWEAEWEDDARRSWHASKMASKRQRAAAQMAALCARPGRVLHI 272

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A7R9YER5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.280e-43
Identity = 95/208 (45.67%), Postives = 129/208 (62.02%), Query Frame = 3

Query:  792 AVSAAVVSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVD--DLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGV--------PAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMSSKRERADKQMRALGIREGIVEHL 1385
            A + + ++V  V PWG+F PAL+AL+GYAA +G E+++FQS+E     + +  +  H+ +D  DLVVG A+ GH F+ G  V LTG TTPWNTLALW   +LA  GFLGVAEG +  V          GVEEVTAI+A Q+L  +  ARAKL+++P        + W+T ++D  RR WHE KM SK  RA  Q+  L +    VEH+
Sbjct:  121 ATAGSEIAVLPVQPWGQFVPALHALLGYAATEGYEMILFQSVEIETSPETLRALVDHLDLDGGDLVVGVAIQGHEFKPGTNV-LTGRTTPWNTLALWNTQELAKTGFLGVAEGWVRTVGDEGETVIAGGVEEVTAISAAQSLSPSRRARAKLLKVPG-------ITWETQFKDAERRAWHERKMRSKLSRAQAQLSVLKLPTAYVEHI 320

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A432R2Q5_9PROT (Uncharacterized protein n=1 Tax=Hydrogenimonas sp. TaxID=2231112 RepID=A0A432R2Q5_9PROT)

HSP 1 Score: 150 bits (379), Expect = 7.580e-39
Identity = 93/191 (48.69%), Postives = 114/191 (59.69%), Query Frame = 3

Query:  810 VSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGG--ETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMSSKRERADKQMRALGIREGIV 1376
            V +F + PW  +T  LN +I  A   GAE ++FQS+E TV  + V  +E H+    LVVGA L  H   G   E V LTG TTPWNTLALW + KL   GFL V+ G LPG+P GVEEV  I+ LQ L   E   AK+V L         V WQT W  + R  +H AKM+SK ERA+KQ++ALGI  GIV
Sbjct:   59 VKLFHIHPWIGYTQPLNMIIEKALSVGAEKILFQSIEVTVSPEDVKRLEEHLDSKTLVVGAKL--HEMHGHVHEKVALTGWTTPWNTLALWNLQKLGLTGFLTVSSGNLPGIPGGVEEVVTISLLQTL-HPEVMDAKMVELKS-------VTWQTQWSCKEREAYHAAKMASKNERAEKQLKALGIEPGIV 239

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A1Z5K272_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K272_FISSO)

HSP 1 Score: 143 bits (361), Expect = 8.460e-36
Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 3

Query:  810 VSVFEVSPWGKFTPALNALIGYAA-RDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPG---VPA-GVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQT-AWEDESRRQWHEAKMSSKRERADKQMRALGIREGIVEHL 1385
            + V  V+PWG+F  ALNAL+ YA  R  A+ ++F S ET V  D +  + AH+  D LVVGA L GH  +G     L+G T+PWNTLA+W++ KL+  GF  V++GLL      P+ GVEEV AIA LQ LLG E+A+AKLV       +L  V WQ  +++D  RR+W E KM SK  RA +Q+  +G+  G V HL
Sbjct:   98 IHVLPVTPWGEFVSALNALVIYARKRLQADRILFLSAETVVDRDGIQELLAHLTPDTLVVGARLPGHVVRGECVTLLSGTTSPWNTLAVWDLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLLGTENAKAKLV-------TLKHVDWQVDSFDDPERRKWQEEKMKSKEIRAQRQLDLIGL-AGKVHHL 287

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A1I5Q9S1_9PROT (Uncharacterized protein n=1 Tax=Hydrogenimonas thermophila TaxID=223786 RepID=A0A1I5Q9S1_9PROT)

HSP 1 Score: 139 bits (349), Expect = 1.480e-34
Identity = 86/191 (45.03%), Postives = 110/191 (57.59%), Query Frame = 3

Query:  810 VSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQG--GETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMSSKRERADKQMRALGIREGIV 1376
            V +F + PW  +T  LN +I  A   GA  ++FQS+E T   + + ++E H+  + LVVGA L  H   G   + V LTG TTPWNTLALW + KL   GFL V+ G LPG+P GVEEV  I+ LQ L       AK+V L         V W T W  + R  +H  KM+SK ERA+KQ+RALGI  G V
Sbjct:   59 VKLFHIHPWIGYTQPLNMIIEKALSVGATKLLFQSIEVTALPEDIKSLERHLDSNTLVVGAKL--HEMHGHQNQKVELTGWTTPWNTLALWNLEKLGLTGFLTVSSGNLPGIPGGVEEVATISLLQTL-HPYSMNAKMVELKS-------VVWNTQWSCKEREAYHATKMASKNERAEKQLRALGISPGFV 239

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A7R9ZI32_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZI32_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.140e-33
Identity = 87/195 (44.62%), Postives = 116/195 (59.49%), Query Frame = 3

Query:  816 VFEVSPWGKFTPALNALIGYAARD-GAELVMFQSLETTVGEDAVLTMEAHMGVDD---LVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDES-RRQWHEAKMSSKRERADKQMRALGIREGIVEHL 1385
            V  V+PWGKF PALNAL+ YA+ D G +L+MF S E     + + T+  H+   D   LV GA L GH +  G+ V LTG T PWNTLA+W V KL+  GF   ++    G  AGVEE  A    Q L  A   + KLV L   S       WQ ++ED++ R++WHE KM SK ERAD Q++AL + +G+V+H+
Sbjct:   91 VLPVTPWGKFVPALNALVRYASEDVGVDLIMFVSAEVDASANTIATLCNHVVTKDDDTLVAGAVLNGHEYSKGQCVPLTGRTCPWNTLAVWNVEKLSRTGFQLYSD---LGTHAGVEECLAAGLYQRLFPAS--KIKLVELSDVS-------WQESFEDDAERKRWHEQKMKSKWERADVQLKALNL-DGVVDHV 272

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: A0A2R5GIM4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIM4_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.160e-33
Identity = 95/197 (48.22%), Postives = 121/197 (61.42%), Query Frame = 3

Query:  810 VSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDD-LVVGAALTG-HAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLL-PGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQ-WQTAWE-DESRRQWHEAKMSSKRERADKQMRALGIREGIVEHL 1385
            V V  VSPWGKF PALNAL  +AA  G + + FQSLE  V  D +  + A + + D LV GAA    H F  G  V L G T+PWNTLA+W V KLA  GF  VAEGL   G+ AGVEEV+ I+ LQ ++    A+AKL+       +LL+   W+T ++ DE+RR WH  KM SK +R   Q+ ALGI  GIV+H+
Sbjct:  219 VHVLPVSPWGKFVPALNALTSFAANHGFKYICFQSLEVDVPPDVIRALVAQLQLGDTLVAGAAFPNDHLFSSGWHV-LNGRTSPWNTLAVWAVGKLALTGFSLVAEGLPHEGISAGVEEVSTISILQRIMP-RQAKAKLL----LHRALLRADTWRTDFQGDEARRDWHRKKMQSKIDRPAAQLDALGIDPGIVQHI 409

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BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Match: F4NXG8_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NXG8_BATDJ)

HSP 1 Score: 135 bits (340), Expect = 3.380e-33
Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 3

Query:  810 VSVFEVSPWGKFTPALNALIGYAARDGAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGGETVTLTGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMS 1316
            V +  V  WG+F PALNAL+  A   G + +++QS+E  V  + + TM +    D LVVG AL+GHAF  G+   L GVTTPWNTLALW VSKL  LGFL VAEG    V  GVEEV+AIA  Q L+   HA+A L+R+ +         W T W D+ R+ WH+ K++
Sbjct:   78 VVLVPVVKWGRFIPALNALLLEAVNGGFKYILYQSVEAVVSANEIHTMISWFDQDTLVVGKALSGHAFTVGKQ-RLNGVTTPWNTLALWAVSKLKCLGFLMVAEGS-EDVQGGVEEVSAIAVFQKLVSPNHAKAILLRMSEDPSQ----DWDTQWTDQGRQAWHDKKLT 240

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot

BLAST of mRNA_P-littoralis_Contig77.124.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN87_ECTSI	1.230e-117	73.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J5G9_9PHAE	1.030e-91	66.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z311_9STRA	8.240e-49	40.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9YER5_9STRA	1.280e-43	45.67	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A432R2Q5_9PROT	7.580e-39	48.69	Uncharacterized protein n=1 Tax=Hydrogenimonas sp....	[more]
A0A1Z5K272_FISSO	8.460e-36	46.46	Uncharacterized protein n=1 Tax=Fistulifera solari...	[more]
A0A1I5Q9S1_9PROT	1.480e-34	45.03	Uncharacterized protein n=1 Tax=Hydrogenimonas the...	[more]
A0A7R9ZI32_9STRA	1.140e-33	44.62	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
A0A2R5GIM4_9STRA	3.160e-33	48.22	Uncharacterized protein n=1 Tax=Hondaea fermentalg...	[more]
F4NXG8_BATDJ	3.380e-33	47.34	Uncharacterized protein n=2 Tax=Batrachochytrium d...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig77	contig	P-littoralis_Contig77:544573..549190 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FN87
Model size	1391
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	5
Evalue	4.34e-119
EggNOG OGs	28KV4@1\|root,2QTBH@2759\|Eukaryota
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-15_003370.1
Cds size	1254

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig77.124.5	prot_P-littoralis_Contig77.124.5	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig77 544710..549190 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791591.993112-UTR-P-littoralis_Contig77:544572..544709	1680791591.993112-UTR-P-littoralis_Contig77:544572..544709	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig77 544573..544709 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791592.0044034-CDS-P-littoralis_Contig77:544709..545090	1680791592.0044034-CDS-P-littoralis_Contig77:544709..545090	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig77 544710..545090 +
1680791592.0142717-CDS-P-littoralis_Contig77:546764..547157	1680791592.0142717-CDS-P-littoralis_Contig77:546764..547157	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig77 546765..547157 +
1680791592.0256517-CDS-P-littoralis_Contig77:547511..547702	1680791592.0256517-CDS-P-littoralis_Contig77:547511..547702	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig77 547512..547702 +
1680791592.0370755-CDS-P-littoralis_Contig77:547956..548104	1680791592.0370755-CDS-P-littoralis_Contig77:547956..548104	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig77 547957..548104 +
1680791592.0535367-CDS-P-littoralis_Contig77:549049..549190	1680791592.0535367-CDS-P-littoralis_Contig77:549049..549190	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig77 549050..549190 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig77:544573..549190+
coding sequence from alignment at P-littoralis_Contig77:544573..549190+

protein sequence of mRNA_P-littoralis_Contig77.124.5

>prot_P-littoralis_Contig77.124.5 ID=prot_P-littoralis_Contig77.124.5|Name=mRNA_P-littoralis_Contig77.124.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MEGAPETDDAMYDRCSLCSRHGCPRVRLCDQPDNRDVPECLPSPEGNNQV
TSGHRFDQLKWRIHRLPKAHGMSLSAAAATAAPGDAGGGSGGGREGSERQ
ENRRRRRLCVCTRIHQNNADRPVDLVKVREFLDAALLYADRIAIAVGPPP
PTAATTTNDDDHSQQQQQQQEFSLLQMISRVAREAEKETALLPPPSSGEE
EGGRGGRGGHHGEAEEKAAVSAAVVSVFEVSPWGKFTPALNALIGYAARD
GAELVMFQSLETTVGEDAVLTMEAHMGVDDLVVGAALTGHAFQGGETVTL
TGVTTPWNTLALWEVSKLATLGFLGVAEGLLPGVPAGVEEVTAIAALQAL
LGAEHARAKLVRLPQASLSLLQVQWQTAWEDESRRQWHEAKMSSKRERAD
KQMRALGIREGIVEHLG*

mRNA from alignment at P-littoralis_Contig77:544573..549190+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig77.124.5 ID=mRNA_P-littoralis_Contig77.124.5|Name=mRNA_P-littoralis_Contig77.124.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=4618bp|location=Sequence derived from alignment at P-littoralis_Contig77:544573..549190+ (Pylaiella littoralis U1_48)
AGGCAGCAGCATCAAGCTGGAGGACGAGGTTCTGGTGGTCGTGAAAGCGG
CAGGCCGTCGACTGGGAGTGATGGCGGGAGAGGCAATAGATTGGACGCCA
TTGATGAAGGGGGGTGTGATGTTGTCGAGAAAGAGAGATGGAGGGCGCTC
CAGAGACAGATGATGCTATGTATGATAGATGCTCACTTTGTTCACGGCAC
GGCTGCCCACGTGTGCGTCTGTGCGACCAACCAGACAACCGCGACGTACC
AGAGTGTCTACCATCACCTGAGGGCAATAACCAAGTCACCAGTGGGCACC
GGTTTGATCAACTCAAGTGGAGGATACATCGGCTACCAAAAGCACACGGG
ATGTCGTTATCGGCGGCTGCTGCTACTGCTGCTCCCGGGGATGCGGGTGG
AGGGAGCGGCGGTGGGCGGGAGGGGTCAGAGCGGCAAGAGAACAGGCGGC
GGCGGCGGTTGTGCGTGTGCACCAGGATCCACCAAAATAACGCAGATCGT
CCTGTGGATTTGGTCAAGGTAAAATCATGCACACAAAGTATGGCCCCAAA
CCCAAACCTACATTCAGTGCGTACCGCGTGCGCACTCGTGCACAGCAGTG
GTCGAGCAGAGCAACCCAGAGTGTGGGATGCTCGTACAGAAGCAAAGGAA
GCGTGTACCACAACAGCAGTACTGCTGCAGCATCTACCGCAGCCCTCCTT
TTAGCGCAGAGCAACTGTCGAGTAATATGTATACGTGTGATACGGCTTTG
TGTAGTAGACGTGTGGCAGCCTTCCCCCGCCCCGCTATTTTTGTGATTTT
TCTCTTTGTGGCCTTAACTACTGCTGTACCGTTGCCTCTCCACCCTCGCA
CGCCTTCGCACACGAGGCACATTTTGTAGGGGTGTTTGTGGGAGGGGAGA
GGGGCAACATTACAACGGTAACCTGTTTGCGGATCGCGGCCTGCAACGCA
TGCTCTTGAGCATCTCCACCCAACCCCTCTCCCCCCTTCCCGACGTCGCA
CGATACCCCCTCCACGCACACAGGCGGCACGTACCGCTGTATAGTAGTGT
AGACAACACCAGGCAGTCTATTTAGATAAGATGACGGCCTGCTCGTGACC
CGCAGGTGGCGACGCGTACTCGCCTCTCGCGTTTTCACCACGCCTCATTC
CCCCCTCCCCTTGAACGGACCAAGGTTTAGTAAAATATTCTGGTTTTTAT
CAACCCGCCGATACTGACGTCCTTAGAGTCTGAGCGCTTGCCTGAAAGTG
CCTATAGCGGTATCTCAGCAGGGACGGTTGAAGGGAAGAGGGTCGACTCG
TGTCTCGATTGATTTTTACCGCACTGCATCCATGGAAGAGTGTGGAAAGC
CGAAGAAACTTGGTGCGCTGTAGATCCAGGATGGGCATGCACTCTTCTCA
CTACCGCCGCACCCCGCAATTCCCCCTTCTCCGTCGGGCGCCTTCGGGGT
ACAGATGGAGGGATTGTTTGTGCTTTTCATTCATTGAAACACCAGACTTT
GGGGTACAGGGTGATGAAAATTGCTCGTCTTTTCCATTCATTGTAACACC
AGACTCCGGGGTACCGGTCGATGGGATTTTTTTTTATTCATGGAAACACC
AGAGAAGGAATACCCACCTCACGCCGAGACGAGACTCAGGGGGACATGAT
ACGTCTCAAACTCCTTTGCACGGATGGTTCCCATCCAGCAGTCCTGCCGG
GAATAAAAACGCCTCCTGAATCGAAGTGCATACCAACTCCCTTTGCGCTG
CTCTGCCAGGTCAAACGGCATAAATTCGTAGAAAAAAATACTCCGGAGTA
CTTTTTTTGTTTAACAAGAATACTTTTCATGATTTGGCAGCCGATTTCGC
ACGGCCATGCCAATCAGACAATGACAGACGCACGCAATTCGCGCGCGACA
TTCCGATACCGTGCTCTCGTAGGACAGCATGGTTAGTTTTGGCGACTGTG
GCCAGCTTCAGGTCCTCGTCCACCTTCATCCGGTCCTTCGGGCCCGGGAA
TGTGCTTGGTCCGCTTGTAACTCGCCGATATGTCGCACAAGCCGTCCCCG
ATCAAATCCGGTTCCCTGCGTCATCGATGCCACCGCTGCTGTGAGGCATG
ACCAGGGAACGTGACACGTGTGTACATTTCACAGCAAATGACATTGACGG
ACGATGAAACGGCCGTTTTTCTGTGTGCTGACGAACACCCAGGTGCGAGA
GTTCCTCGATGCGGCCTTGCTCTACGCCGACCGCATCGCGATCGCCGTGG
GGCCGCCACCACCGACAGCAGCGACCACCACCAACGATGACGACCATAGC
CAACAGCAGCAGCAGCAGCAGGAGTTCTCACTCTTGCAGATGATTTCTCG
GGTCGCTAGAGAGGCGGAGAAGGAGACAGCATTGCTGCCGCCGCCGAGCT
CCGGCGAAGAAGAGGGGGGACGCGGAGGGAGGGGCGGGCACCACGGGGAG
GCGGAGGAGAAGGCGGCGGTCTCGGCGGCCGTCGTCAGCGTGTTCGAAGT
ATCGCCGTGGGGGAAGTTTACGCCGGCGCTGAACGCGCTGATTGGTTACG
CCGCTCGCGACGGGGCGGAGCTTGTCATGTTTCAGGTGCGAACAACGAAA
CCTTACGCACAACATGCACTGCTACTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGTAAAACGTTCCGACTGTCTTTGTGGTTCAAAAGA
GCAATTTGATTTTCTCTATGTACGTGTGGGTGTGTGTATGTGTCCTTTGC
CAAGACAAACTAAGCCGCTAAACACGTGGAAGGACAACAGGAGCGCTGTC
CTTGACCCAGCGCATTCCAAATCCTTGCATTTTACCCACCCCCATCTCCA
AGACGTGAGCTGATGCCTCCCCCCCCCTCCCCCTCTCGTGATCTTCCGGC
CAATAACGTGCGCCTTGTGACATCTTCCAATTAAACCAGTCGTTGGAGAC
CACGGTGGGAGAAGACGCCGTGTTGACCATGGAGGCTCACATGGGAGTAG
ACGATCTAGTTGTTGGCGCGGCCCTCACGGGACACGCCTTCCAAGGAGGC
GAAACCGTCACGCTCACGGGCGTCACCACGCCGTGGAACACGCTGGCGCT
GTGGGAAGTTTCCAAACTGGCCACGCTAGGGTAAGTGAAATCAAGCGGAC
TTCGAAACTCGAAAACACCTTATTTGTCATACAATTTGCGAAGGGAGTTT
CTTCAGATCTCCTCTTTCTCTCTCGTTCTCTCTCTCTTTGCCTCCCTCCC
TGCCCCTCTCTCTCTCTCTCTGTCCCTCTCACTCCCTATCGCTCTCTCTC
TCTTCCTCTCCCTCTCTCTAACCCACCGCCCCGCCTCATCATGATACATT
TCTTTGTCGACAATTTGACTCCACCCCCCTTCAGATTTTTGGGAGTGGCA
GAGGGGCTGCTTCCGGGCGTTCCGGCCGGGGTGGAAGAGGTCACGGCTAT
TGCGGCCCTGCAGGCGCTGCTGGGGGCCGAGCACGCCCGCGCCAAGCTCG
TACGGCTACCGCAGGCGAGCCTATCTTTGCTTGTCGTTTTATCCGAAACC
CCTACACTGTATTTTTCGAATCACTTCGTCAGGATATGACGTGCGATGAA
ACGCTTCCCTCGTGCGTGCCAAGTGTGTTCAGCTACAAGTTTGCCAGCCG
GTGTTTTGCTCGGTTTTATTCATGAACCCTGTTTTTTTTTGTATTTTTTT
GTCCAAATTTGTTCGACAATAAATGCTGTTATATTACCGTGAGTGCTGCC
CCCTTACTTTTTTCCCGCTTTTCCGCAAATTTTGTGTCTTCTGCCGTCTG
ATTACGAACTGCTGCTGTCTGCAAAAGCTTTCCAACAGCCGTGGCACTAT
TTTTTTCCAATGGGCACCAACAAAGTCTGATGTAGGCATTCAGACTGGGC
TAGCGTCAAAGTTCATGCACGAAAATATGACAAGCCTACCGCTCGTGCGC
CGACTTTTTTTCTTTTTTTCTTTTTGCGCGTCCCACCCATGAAATCGGAA
AGCTAAATGGAGCCTTCAGGTTCCGAAACCTCATTCCCTAGAAATATACT
TCGTACTTCAAAAGTATATGTCATTTTCTTACAGGGGACGTCATTTCGTG
ATGCATTTTATTTTTATTTCATTGTTTCCCTGATTTTTTATTTTGGTTTG
GACTTCTGCTGTACCCTTTTCATTCGGGGCTGATTAAAAGTAGTCGAGGG
TAGACAAATTTTCAGAGTGCATATTTGCATATTCGTTGTACCTTGTTCCT
GTCTGTGTGGCCCCGTCTGGCGCGCCCAACTTTTACCGAAAGGTGACGAC
TGGTGTTCACGACAGATGGCATGACAACACACACACACACATGTGGCCCG
ATACACGCGTTCATGTGAACCACGTGGTTGCATCGTCTCGTATGTATCTA
CACGAAATCTAACTGTAGAGCGGAAGAGAAAATGCAGCACGTGCACGTGC
TTCTTTTTTTCTTTTTCTTTTATCAAGCAGGTGCAGTGGCAGACCGCCTG
GGAGGACGAGAGTCGAAGGCAGTGGCACGAGGCTAAGATGTCCAGCAAGC
GCGAAAGAGCCGACAAGCAGATGCGGGCGCTTGGAATCAGGGAGGGCATT
GTGGAGCACTTGGGGTGA

Coding sequence (CDS) from alignment at P-littoralis_Contig77:544573..549190+

>mRNA_P-littoralis_Contig77.124.5 ID=mRNA_P-littoralis_Contig77.124.5|Name=mRNA_P-littoralis_Contig77.124.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig77:544573..549190+ (Pylaiella littoralis U1_48)
ATGGAGGGCGCTCCAGAGACAGATGATGCTATGTATGATAGATGCTCACT
TTGTTCACGGCACGGCTGCCCACGTGTGCGTCTGTGCGACCAACCAGACA
ACCGCGACGTACCAGAGTGTCTACCATCACCTGAGGGCAATAACCAAGTC
ACCAGTGGGCACCGGTTTGATCAACTCAAGTGGAGGATACATCGGCTACC
AAAAGCACACGGGATGTCGTTATCGGCGGCTGCTGCTACTGCTGCTCCCG
GGGATGCGGGTGGAGGGAGCGGCGGTGGGCGGGAGGGGTCAGAGCGGCAA
GAGAACAGGCGGCGGCGGCGGTTGTGCGTGTGCACCAGGATCCACCAAAA
TAACGCAGATCGTCCTGTGGATTTGGTCAAGGTGCGAGAGTTCCTCGATG
CGGCCTTGCTCTACGCCGACCGCATCGCGATCGCCGTGGGGCCGCCACCA
CCGACAGCAGCGACCACCACCAACGATGACGACCATAGCCAACAGCAGCA
GCAGCAGCAGGAGTTCTCACTCTTGCAGATGATTTCTCGGGTCGCTAGAG
AGGCGGAGAAGGAGACAGCATTGCTGCCGCCGCCGAGCTCCGGCGAAGAA
GAGGGGGGACGCGGAGGGAGGGGCGGGCACCACGGGGAGGCGGAGGAGAA
GGCGGCGGTCTCGGCGGCCGTCGTCAGCGTGTTCGAAGTATCGCCGTGGG
GGAAGTTTACGCCGGCGCTGAACGCGCTGATTGGTTACGCCGCTCGCGAC
GGGGCGGAGCTTGTCATGTTTCAGTCGTTGGAGACCACGGTGGGAGAAGA
CGCCGTGTTGACCATGGAGGCTCACATGGGAGTAGACGATCTAGTTGTTG
GCGCGGCCCTCACGGGACACGCCTTCCAAGGAGGCGAAACCGTCACGCTC
ACGGGCGTCACCACGCCGTGGAACACGCTGGCGCTGTGGGAAGTTTCCAA
ACTGGCCACGCTAGGATTTTTGGGAGTGGCAGAGGGGCTGCTTCCGGGCG
TTCCGGCCGGGGTGGAAGAGGTCACGGCTATTGCGGCCCTGCAGGCGCTG
CTGGGGGCCGAGCACGCCCGCGCCAAGCTCGTACGGCTACCGCAGGCGAG
CCTATCTTTGCTTCAGGTGCAGTGGCAGACCGCCTGGGAGGACGAGAGTC
GAAGGCAGTGGCACGAGGCTAAGATGTCCAGCAAGCGCGAAAGAGCCGAC
AAGCAGATGCGGGCGCTTGGAATCAGGGAGGGCATTGTGGAGCACTTGGG
GTGA