mRNA_P-littoralis_Contig77.100.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.100.5 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 5.370e-171 Identity = 835/1271 (65.70%), Postives = 910/1271 (71.60%), Query Frame = 1
Query: 469 QQGGCSPTSTSGSATPPVARLRMLHLLTLERQRSQRRLSPRLACAADTQLGMAMPVVGRDSVDRMKEWGVKGMWKEAREQLEKEGSGGLTPSLGAYEGAVQALAVSGKCAEAVFLLGDIKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGKNTGKVTNLLLKMRAQGLDTDDYRYRQAMKACAMASDPTQVISVWKLFVGGGRLVEDVVPGDVSRVAKAMGALGDWRSIVKLLESKTLEGGGGLPALNA---------SSYNWLVSATWH--------------GR-GTP-DADTYFLAFRAFLKSRGRHWSAALDMFRAMQASSS-TLPRE-DGVI---EGVEAAD-------PSVFLTADIWCKTIATLAQGSQPRDALPAALSLMREAEEAGVEVDAATTDVVLAALGKAKGKDDQLLALFLGAEKRGLRLKRPSYAWAVVAYKRSGRTREALDAALAFSERGIAMTVVGWNAAMHAASIMGQPETALKLLEEAKVKGTKLTEVSYSTAIGACARATTDIEENARKAVSLLEEMKAAGLKPYPPAHQAALSAVAASEGHEAAXXXXXXXXXXXXXXXXXXYNPALKIAARAGDWMVAISAIDVMTKAAMTDFEAGPDVVSFNFAMSACAKAGESEARGAEIHLRLAHRVLSRMQACGLAXXXXXXXXXXXXXXXXXMWEKALELLAEARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDWDKXXXXXXXXXXXXXXXXXXXXXXXXXVCGRSGDVHQALAQLENARRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARTGKTTVALALMDEMKESMPCDETTYSTVVHGCSQTRDWKAAERLLKDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEVAEIFLEMMRNRRVELDVVGRAAAMVAFGRGGRADKALGLMDEMRKNGPSPNLQCFNGAIEACALADDIDGGMTL 4170
Q+ GC S S P + L +E + R R A AA G V R S + G G W EA EQLEKE GGLTPSLGA+E A+QAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DD YR+AMKACAMA+DPTQV+ VW+LFVG GR+V DV +VSRVA+AMGALGDW+ I+ LL +++ GGG LP L+ + YNWLVSA GR G P DADTY LAF+AF+KS GRHW ALD+FR MQ+SS T PR DG + EGV A+ S FL+ D+WCKTI T+AQGS PR L AALSLM EA++AGVEVDAATTD +L ALGKAKGKD+QLLALF AE+RGLRLKR SYAWAVVAYKR G+ +EALD+AL+FSERGI MTVVGWNAAMHAAS+ G+P AL+LLEEAK KG K TEV+Y+TAIGACA+ATT+++ NAR PAHQAAL+A+AASEGH AA Y+P LK AA+ GDW AI+ IDVMT+A++TD +AGPDVV FN+AMSACAKAGE E LAHRV+SR+QACGLA XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +SMPCDETT+S ++HGC+QTRDW AA RLL++M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAE+AEI LEMMR++ VELD VGR+ A+VAFGRGGR DKAL LMD +R+NG PNLQCFNGAIEACALADDIDGGM+L
Sbjct: 6 QRSGCRLPSRLSSGAPSAELGQSSEALAVE---ALARAPKRTAVAAAA--GSTGAAVARASPVEKQSGG--GKWTEAIEQLEKERGGGLTPSLGAFERAIQALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDATYRKAMKACAMANDPTQVVGVWELFVGKGRVVTDVAAAEVSRVARAMGALGDWQGIIGLLGTRSTAGGGPLPDLDRLRAMVHPAFAIYNWLVSAHAQLGDAKAVLTTIGNMGRNGHPADADTYSLAFKAFVKSGGRHWGGALDVFRTMQSSSGVTTPRGGDGSVMEVEGVGVAEVEASAGVSSEFLSTDVWCKTITTVAQGSPPRKTLSAALSLMEEAQQAGVEVDAATTDAILTALGKAKGKDEQLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALDSALSFSERGIVMTVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYATAIGACAKATTNVKANARXXXXXXXXXXXXXXXXXXPAHQAALTALAASEGHRAAMDLLAKMRANGTRLTSASYSPVLKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMSACAKAGECE---------LAHRVMSRIQACGLAANLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDIDGGMSL 1260 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.100.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.100.5 >prot_P-littoralis_Contig77.100.5 ID=prot_P-littoralis_Contig77.100.5|Name=mRNA_P-littoralis_Contig77.100.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1341bp MQVLHAGRHLPSHQHKHQQHRRRRGIKLNASALLLSLALLADKPERALGWback to top mRNA from alignment at P-littoralis_Contig77:337074..354609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.100.5 ID=mRNA_P-littoralis_Contig77.100.5|Name=mRNA_P-littoralis_Contig77.100.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=17536bp|location=Sequence derived from alignment at P-littoralis_Contig77:337074..354609+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:337074..354609+ >mRNA_P-littoralis_Contig77.100.5 ID=mRNA_P-littoralis_Contig77.100.5|Name=mRNA_P-littoralis_Contig77.100.5|organism=Pylaiella littoralis U1_48|type=CDS|length=4023bp|location=Sequence derived from alignment at P-littoralis_Contig77:337074..354609+ (Pylaiella littoralis U1_48)back to top |