mRNA_P-littoralis_Contig77.32.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.32.1
Unique NamemRNA_P-littoralis_Contig77.32.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI)

HSP 1 Score: 636 bits (1640), Expect = 1.790e-223
Identity = 316/367 (86.10%), Postives = 341/367 (92.92%), Query Frame = 1
Query:   37 MLVWKGDRLLMALSMLGVVRCYVSPSLGGVY--SQRAAQQRLHRRSRSTGDRSNNDVVNPKTSGGGAGAGTVEQGSHVDAWDTWEFGTWKTRTHSENMAEAAAREVGAANVSTLKGTGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGYRVR 1131
            ML+W+GDRLLMALS LG+VRCY+SP LGG Y  S R+ QQRL+RRSRSTGDRS+NDVV+PKTSGGGA    VEQ SHVD WDTWEFGTWKTRTHSEN+AEAAAR  G A VST  GT ALVDQ++SDL+RAVDLLKGY+S DR+SRM+DVLDQRTRSAT+VFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSK+ARLKTMCTAMGSQKWL+LHGHD PEDAVAKLK DGYQVVASDLSPSAVPI +IDWSVPTAVVLGNEERGISDSMR+MADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDER+ V VTWLMQCVRGSEH+L+REGIDIPQEIFGTDK+RP+NIAGYRVR
Sbjct:    1 MLIWRGDRLLMALSTLGLVRCYLSPRLGGTYPCSSRSVQQRLYRRSRSTGDRSSNDVVSPKTSGGGA----VEQDSHVDEWDTWEFGTWKTRTHSENVAEAAARAAGPAKVSTFIGTRALVDQTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.300e-75
Identity = 126/249 (50.60%), Postives = 168/249 (67.47%), Query Frame = 1
Query:  379 TGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGY 1122
            T  L +   ++++RA++ L+ +   +R+ R+QDVL++RT     VFENP+NPNNVWA LRT+DSFGIQ+ H+++DP  Y KK RL TM +AMGSQKWLSLHGHD+  D    LKA GY+++ S L P AVP+  IDWS    AV  GNE+ G+S+ +    D TF IPMRGF  SFN+SVA SI+LA  +A   L+ GDL E ER+ V + WL++ V   E VL+REGI +PQ +     E  E IAG+
Sbjct:    7 TQLLAEMPVAEMERAIEALERFTQPERLGRLQDVLNKRTAHLCTVFENPSNPNNVWAALRTIDSFGIQNVHVIADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMRGFAESFNVSVALSIVLASAAAGGGLRGGDLGEGERRAVYLRWLLRTVAAGESVLQREGIALPQSMSLRRTE--EGIAGF 253          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC)

HSP 1 Score: 223 bits (567), Expect = 3.430e-63
Identity = 112/242 (46.28%), Postives = 153/242 (63.22%), Query Frame = 1
Query:  409 DLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLK-TMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGYRVR 1131
            D + AV+ L   +S DR+ R+Q V+ QRT     VFE P NPNNVWACLRTLDSFGIQH  ++  P  Y ++  +   M  A+GS +WLS+    +  +A+ +LK  G +V ASDL   +  +  +D S P  +VLGNE  GIS+ MR +AD TF +PMRGF  SFN+SVAC++  A+LS +  LK GDL E ER  V+  WLM+CV GS+ VL R+G+ +P+ +  T ++R     G R R
Sbjct:   87 DYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVPERLRRT-RQRLLGCEGVRKR 327          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA)

HSP 1 Score: 216 bits (550), Expect = 9.850e-62
Identity = 109/249 (43.78%), Postives = 163/249 (65.46%), Query Frame = 1
Query:  394 DQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSP--SAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQE-IFGTDKERPENIAGYRV 1128
            D+   D+  A + L  + +  R+ R++D++++RT+S   VFEN ANPNN+WACLR+LD+FG+Q+AH++ D + Y K  RL    +AMGSQKWL++  H +    VA LK +GY V+ASDL P  S  P+ ++ W+    A+V+GNEERGI++ MR++ D TF IPM GF  SFN+S + ++ LA +S++  LKHGDLP  E+  +++ WL++ V     +LRREG+ I  E I  T K     + GY +
Sbjct:    8 DRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERILPTSKV----VLGYNL 252          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.140e-60
Identity = 116/293 (39.59%), Postives = 176/293 (60.07%), Query Frame = 1
Query:  271 WDTWEFGT---W---------KTRTHSENMAEAAAREVGAANVSTLKGTGALVDQSSSDLDR-------AVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSP--SAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIF 1083
            +D WEFG    W         + + H +   ++  +E         +G    +D    D DR       A + L  + +  R+ R++D++++RT+S   VFEN ANPNN+WACLR+LD+FG+Q+AH++ D + Y K  RL    +AMGSQKWL++  H +    VA LK +GY V+ASDL P  S  P+ +++W+    A+V+GNEERGI++ MR++ D TF IPM GF  SFN+S + ++ LA +S++  LKHGDLP  E+  +++ WL++ V     +LRREG+ I  E F
Sbjct:   95 FDNWEFGVNAGWSGENNGRSLRIKQHGDGSTQSVGKEA-----EEREGENHNMDHEEED-DRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERF 381          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV)

HSP 1 Score: 207 bits (528), Expect = 1.200e-56
Identity = 113/234 (48.29%), Postives = 154/234 (65.81%), Query Frame = 1
Query:  418 RAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKT---MCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV-PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-----ALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEIF 1083
            RA D+L+ ++  DR  R+  VL QRT+    +FENP+NP+NVWACLRT+DSFG+Q+  +V D   Y  K  ++    M TAMGS KWLSL  H + E+AV  +KA+GY++ ASDL+P++  + ++DW V P  VV+GNEERGISD MR MAD TF +PM GF  SFN+SVA SI LAH+SA       AL+ GDL   E   + +  L+  +   +    +L++EGI +P EIF
Sbjct:  174 RATDILRPFVGDDRYERIDSVLRQRTKRTKFLFENPSNPSNVWACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHELACLRLKGLLGSLPKRKLGPILLKQEGIVLP-EIF 406          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S1Y6X6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X6_9STRA)

HSP 1 Score: 199 bits (506), Expect = 7.640e-54
Identity = 116/273 (42.49%), Postives = 166/273 (60.81%), Query Frame = 1
Query:  316 ENMAEAAAREVGAANVSTLKGTGALVDQSSSDL-DRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKK---ARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV----PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRA-------LKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
            + +AE+ ARE   A +  L+      D  S DL  RA + L+ ++  DR  RM+ VL QRT++   +FENP+NP+NVWACLRT+DSFG+Q   +V     Y  K   A+   + TAMGS +WLSL  H T   AVAKLK++GY++ ASDL+P++  + D+DWS     P  +V+GNE RGIS  MR +AD TF +PM GF  SFN+SVA +I LAHLSA          L+ GD+ E E  R+++  ++  +   R +  +L+R  + +P  +
Sbjct:  106 KELAESEAREDEKA-LEKLRRYWDAWDSLSPDLVARATETLRPFIREDRAERMESVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQDVDLVVQSGQYEGKGAIAQKSGLRTAMGSAQWLSLTNHPTTASAVAKLKSEGYKLYASDLNPNSKDVRDVDWSADGDRPICIVMGNEGRGISQEMRELADETFTLPMCGFAESFNLSVATAITLAHLSAKSGHENQEGPLRPGDMDEHEYNRLLLKGIIFSLPQRRTARALLKRNNVVLPNAL 377          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.590e-53
Identity = 101/243 (41.56%), Postives = 156/243 (64.20%), Query Frame = 1
Query:  418 RAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARL---KTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV---PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-------------ALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
            +A++ L+ +++GDR+ R+  VL QRT+ +  +FENP+NP+NVWACLRT+DSFG+Q+  ++ D   Y+ K  +   K M TAMGS +WL+L  H T ++A+ +++  G+++ ASDL+P++  + DIDW     P  +V+GNE+RGIS  MR MAD TF +PM GF  SFN+SVA SI LAH+SA                L+ GDL E E   + +  L+  +   R S+ +L++ G+++P  +
Sbjct:  138 KAIETLEPWINGDRLERVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGMQNVDVIIDSGRYAGKQAISQKKGMRTAMGSAQWLTLTNHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAGVELPDAL 380          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A8J2SJW7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJW7_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.940e-52
Identity = 110/258 (42.64%), Postives = 148/258 (57.36%), Query Frame = 1
Query:  367 TLKGTGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDP----------------STYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDW-SVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGT 1089
            TL G  A+V        RAV +L  Y+S +R    Q V+ QRTR  ++ FE P+NP+NVWACLRT+D+FG Q  HIV D                  T   + R K M +AMG+QKWLSL  H   +  V+KLK++G  V A+DLSP AV   ++DW S   A+V GNEE GISD +R +AD    +PMRG   S N+SV+    LAH+ A  AL   DL  +ER  +++ W +  VR    +LRREG+++ Q +  T
Sbjct:   63 TLTGDAAVVR-------RAVSILAPYVSDERRDTFQRVVQQRTRHLSVAFERPSNPSNVWACLRTIDAFGCQDVHIVEDSLEEAAKRAAARGVHADPTQRMRGRKKRMTSAMGAQKWLSLEAHADAQALVSKLKSEGRIVAATDLSPGAVDFSEVDWASGKHALVFGNEEVGISDELRELADVRVRLPMRGLAESLNLSVSVGAALAHVDAKGALV-PDLTVEERDLLLLRWSLLSVRAGRELLRREGVELDQGVLKT 312          
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S4VNE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VNE4_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.310e-51
Identity = 103/239 (43.10%), Postives = 154/239 (64.44%), Query Frame = 1
Query:  430 LLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARL---KTMCTAMGSQKWLSLHGHDTPEDAVAKLKAD-GYQVVASDLSPSAVPIGDIDWSV-PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSA--------------VRALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
            +L+ Y++ DR+ R+  VL QRT++   +FENP+NP+NVWACLRT+DSFG+Q+  +V +   Y  KA +   + M TAMGS +WLSL  + T  DAV +++ + GY++ ASDL+P++  + D+DW V P  VV+GNE+RGIS+ MRN+AD TF +PM GF  SFN+SVA ++ LAH+SA                 L+ GDL E E   + +  L+  +   R    +L+++GI +P +I
Sbjct:  136 ILEPYINADRLERIDSVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQNVDLVINSGLYEGKAAISQKRGMRTAMGSAQWLSLRNYMTTADAVREIREEKGYKIYASDLNPNSKDVRDLDWDVGPICVVMGNEDRGISEEMRNLADETFTLPMVGFAESFNLSVATAVTLAHMSASSRQKEVEGGETIVTGPLRPGDLDEHEFNCLRLKGLLNSLPQRRTGPALLKQKGIVLPDDI 374          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y6_ECTSI1.790e-22386.10SpoU_methylase domain-containing protein n=2 Tax=E... [more]
A0A836C8H0_9STRA4.300e-7550.60Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A0G4EX06_VITBC3.430e-6346.28SpoU_methylase domain-containing protein n=2 Tax=V... [more]
A0A4D9CY40_9STRA9.850e-6243.78SpoU_methylase domain-containing protein n=2 Tax=M... [more]
W7UA00_9STRA1.140e-6039.59Trna rrna methyltransferase n=1 Tax=Nannochloropsi... [more]
A0A7S2A9L6_TRICV1.200e-5648.29Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1Y6X6_9STRA7.640e-5442.49Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0Y847_9STRA1.590e-5341.56Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A8J2SJW7_9STRA2.940e-5242.64Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S4VNE4_9STRA1.310e-5143.10Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:95911..99901 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6Y6
PFAMsSpoU_methylase
Model size2094
Max annot lvl2759|Eukaryota
KEGG koko:K00556
Hectar predicted targeting categorysignal peptide
Exons5
Evalue2.35e-229
EggNOG OGsCOG0566@1|root,KOG0838@2759|Eukaryota
Ec32 ortholog descriptiontRNA/rRNA methyltransferase, SpoU type
Ec32 orthologEc-01_011750.1
EC2.1.1.34
DescriptionrRNA methyltransferase
Cds size1098
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.32.1prot_P-littoralis_Contig77.32.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 95947..98941 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791586.735266-UTR-P-littoralis_Contig77:95910..959461680791586.735266-UTR-P-littoralis_Contig77:95910..95946Pylaiella littoralis U1_48UTRP-littoralis_Contig77 95911..95946 +
1680791586.813013-UTR-P-littoralis_Contig77:98941..999011680791586.813013-UTR-P-littoralis_Contig77:98941..99901Pylaiella littoralis U1_48UTRP-littoralis_Contig77 98942..99901 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791586.7506065-CDS-P-littoralis_Contig77:95946..962101680791586.7506065-CDS-P-littoralis_Contig77:95946..96210Pylaiella littoralis U1_48CDSP-littoralis_Contig77 95947..96210 +
1680791586.7625237-CDS-P-littoralis_Contig77:96544..967841680791586.7625237-CDS-P-littoralis_Contig77:96544..96784Pylaiella littoralis U1_48CDSP-littoralis_Contig77 96545..96784 +
1680791586.7764099-CDS-P-littoralis_Contig77:97365..975601680791586.7764099-CDS-P-littoralis_Contig77:97365..97560Pylaiella littoralis U1_48CDSP-littoralis_Contig77 97366..97560 +
1680791586.789205-CDS-P-littoralis_Contig77:97937..981551680791586.789205-CDS-P-littoralis_Contig77:97937..98155Pylaiella littoralis U1_48CDSP-littoralis_Contig77 97938..98155 +
1680791586.8031456-CDS-P-littoralis_Contig77:98760..989411680791586.8031456-CDS-P-littoralis_Contig77:98760..98941Pylaiella littoralis U1_48CDSP-littoralis_Contig77 98761..98941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.32.1

>prot_P-littoralis_Contig77.32.1 ID=prot_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp
MLVWKGDRLLMALSMLGVVRCYVSPSLGGVYSQRAAQQRLHRRSRSTGDR
SNNDVVNPKTSGGGAGAGTVEQGSHVDAWDTWEFGTWKTRTHSENMAEAA
AREVGAANVSTLKGTGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLD
QRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLK
TMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDID
WSVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILA
HLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFG
TDKERPENIAGYRVR*
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mRNA from alignment at P-littoralis_Contig77:95911..99901+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.32.1 ID=mRNA_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3991bp|location=Sequence derived from alignment at P-littoralis_Contig77:95911..99901+ (Pylaiella littoralis U1_48)
CGTGATAGCACCTGCAGGTCGTCAGCCTTGAACGCAATGCTTGTATGGAA GGGTGACCGACTGCTGATGGCACTCTCCATGTTGGGCGTCGTCCGCTGCT ACGTTTCTCCCAGTTTGGGTGGCGTCTATTCTCAAAGGGCCGCGCAGCAG CGGCTACACAGAAGGTCGCGGTCAACAGGTGATCGTAGCAATAATGATGT TGTGAACCCCAAAACAAGCGGCGGGGGCGCTGGTGCGGGTACTGTCGAAC AAGGCAGCCACGTAGACGCGTGGGACACGTGGGAGTTCGGCACTTGGAAG GTGTGGACTTGTGTTCTAGCTTATGTTTTGGTAATTCACCCCGAGACGAT ACAACAGTTGGGTGTGCCGGCGAAGTTGAGTGTACATACAGCACATGATG CCGTTGCTGTTGTTGTTGTTGTTGTTGTGGCATCATCACCTACTATTTTG TGCTGCGCTTGCCATTGCGATTTGCCTTCTCGTGAGCTGTCGTGTGTTGC GATTCATTGCCGTATCGTTCATCACTCAGTAACGCAAGCGTACGTATCGT GCTTCCATAGCTCGCTGCATTGAAAACACGACACCATCAGGTTCAAGCAG TGCATGTTTCTTTGACCCACCTCGATGCGCGCAGACGCGGACTCACAGTG AAAACATGGCGGAGGCGGCAGCCCGAGAGGTGGGGGCTGCCAACGTTTCC ACGTTGAAAGGAACAGGGGCATTAGTGGACCAAAGTTCCTCCGACCTCGA CCGCGCAGTAGACCTGCTGAAGGGCTATATGTCGGGGGACCGGATGTCGC GGATGCAAGACGTTCTCGACCAGCGCACGAGAAGTGCGACGATGGTGTTC GAGAACCCTGCTAACCCGAACAACGTGAGGAATGAATCGACAAAGATGGA AGATGACTGGCACCACCAGATCTGTTGTTGCTCCTGGTGTGTGTTTGTTT GTGTGTGTTTGTTTGTGTGCGTTCCCTGGTGCGTGCAGGCCAACGCTTTT AAAAACCAGCAGCTTGCTTCCACCACGCGCAGAGTCCTAGGCTGTTGGTG TTGGATTACCCCACGATGAAGTTGGAGATGCATCAGCCAACCCGAAGTAC GGGCAGCAATATACGGACTGCATGCTCGTGGGTGTCTGCGTTATTTCCGT ACGATACGCATCAGAATCAGACACACCGGTAGGCCTAGGACGCACAACGA AAGCAGAGGCAGGGGCTGTCTTGTATCTAAATTGCGGGTGCACTTTTTAA CCCTTCCCCCGACATCGTAGCACACGATTAGAAACCATGCGCCGGCGGAG TGCCACCCCCTTACACCCATACGGGCTCGTGCACCACGTGGAGGTTGAAC ACGCGACCTGCATGCGTCAGTTGATAGCTTGGGCTGTTCCACGTTAGTTT TGCTGCAATTTCGTTTGATACTTTGGATGCGTGTATGGTCTATGGTACTG TGCAGGTATGGGCGTGCCTCCGAACTCTCGACTCGTTCGGGATCCAGCAC GCGCACATCGTGTCGGACCCTTCAACGTACTCCAAGAAAGCCCGGCTCAA GACCATGTGCACCGCAATGGGCAGCCAGAAATGGCTGAGTCTTCACGGAC ACGACACCCCTGAGGATGCCGTGGCTAAACTGAAGGCAGACGGGTACCAG GTGAATGAACCGACCCTCTGTGTAAAGCCCACAGAGTTCTTGATTGTACC AGCACAGCATGCTCCCGGTTTTGGCTTGTCAACCAATCCCTGGATGCAGA GTAAGTACGGGCGCCGTGCGCCGTGCCATGCCGCTACAGTAAGGAACTTG TGTTTGCTGTTTGTTGTCCAGTACCACCTCGGCCTTCCGTGACATGCGGT ATCATTATATACCGCCGCACCATGCTACAGCTGTGCCGCCCAAGTCGCAC GTTCCTGGCGTCCCTTGCGTATTACTCTGGCATCTCTTATCATACCCCCG AACAACAGTTTTCTTACGCTGCTCATGTGTACATACGCTGGTACTATTCC CCTTGTCATGACTGGGTGCATTTTCAGGTGGTTGCAAGCGACCTTTCCCC GTCCGCCGTGCCCATCGGAGATATAGACTGGTCGGTACCGACGGCTGTGG TTCTGGGGAACGAAGAGCGGGGAATATCGGACTCGATGAGAAATATGGCG GACGCCACGTTCGTGATACCGATGAGGGGGTTCGTCCGATCGTTCAACAT GTCGGTCGCGTGCTCCATCATTCTGGCACATCTAAGCGCCGTCAGGTACT GCTGTATTGTATCACACGCGTGAGGTGTTGTTCCATTGCATCATGAACTG CTGTGATGTACTTGGGAAGCACAATGGTGCGCTGCTGCCGCACACTGCTC TTACCACTACACCGGCCGCACTTGCCTGCTTCCGTGTTGTTTTGTGGCCG GGTTTGATGAGTCAAGGCGCCAGTGGCGTGTCGACAATCGTGTGTGCATA CGAGCCTTGGGAGAAGAGTCGCATGGTCGAGCCTGTTTGACCACTCCGTC CCCGCAGCACTTCACACGGTGTTGTGTTGGTTTGTCGTGGCATGGCGTGG CGTTGTTCTTCCTGTAGCCATGTGTTCATTTGGTGCCCACCCTTTGCGGT TCACCATGTGTTGCAATCAGGTGCTGGATGCGCGGGATAGTACCTACCGT CCTTCCAAAGTGGCACGGGTTGAGCTTTCTTCACGTGGCGCAATTTGAGC ATGGGTTGTTCGCTTGCAGTTTTCGCGGCGGGGTCGTACTTTAATACACA CGAGCATAACCCGGTCGGGTTTCATGGTCGTTATGGAAAGCGCCGATAAA CACCCGTTCGTGTCGATGACCTTGTGATGCATGAAACAATGATACAACAG GGCTCTGAAGCATGGCGACCTCCCGGAAGACGAACGAAAACGGGTGATCG TGACCTGGCTCATGCAGTGCGTCCGGGGGTCGGAGCACGTCCTCAGACGA GAAGGCATCGACATACCCCAGGAGATATTTGGGACCGATAAGGAGAGGCC GGAGAACATTGCCGGCTACCGTGTGCGATGAAGAAAGGCCTTACGCTGGC TGGGCGCATAAGCTTTAGCAGTAGGTGCTGTTGGTATGTTTCACATTTGT CAACAATTTTTTTTTTGTGTGATTTGTCGATACCATTCACCAGTATATAT CCTACCTACATGTACGTCGTTTGTGTGTGTTTCAGTATGAGTACGAAAAG GAATCGTCTATCGGTATGAAGGTCTGAACAAACATGTCTGAATGTGAACA CAACAACGACGAGAGCAGGAATGGGTGGTATGTCTACCGCCGAATTCGAA GAGGAGAGGATAGAGGGAAGATCATGTGAAACAAAAGTAGTATCATATTT TTACGGTTAGGTCCCCGACGGCCTTTTGTGTTCGCGTGTCAGCACGCATT GGATGAGAAAACTGGATTTACACGGGGAGGTTTCGGCCGGACTTGAACTG GCAATGATTAACCCGCCCGCTAGATCTGATTTCCCGGCTTTCCATTGCAA GCAAACTAAACGGCTTCAGTCAGTTTCACGCCTGTCACGCGACCCTAGAG CAACAGCTGACTCTTCATTTATTCCGCAAGCAGGGGAAACTTCCTTTTCC TGGAAGGTATACTGAACGAATTCCACTAAATCAAAAATGAGTAGTTTTTT TCTGCTGCTTGCTGTAAAGTTCTTTATTGTAGAGAAGGGGAAGAGGTACA GGTATTACATGAGCGGTGCGTAGAGGAAGTTCAAAGGAGAAGCTCTCTCT TCGACGTGTATGTGATATATGTGCAATCAACTGAAATATACCATGAGACC ACCGCGCAGGTTTTCCACTCGACTTTAACATCGCGCAAGTCTCCCCCCAT GAGAGAGAACCGCCCGTGGTTGCATAATACATAGCGCAGTGTGCTGTCTG GAGTGCTGCCTGCAACACACTCCCTGCAACACAGGCCCGGTGGTTGGAAC AATACTCAAGACAGAAAACAACCAACGGTGCAATGTCTGGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig77:95911..99901+

>mRNA_P-littoralis_Contig77.32.1 ID=mRNA_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1098bp|location=Sequence derived from alignment at P-littoralis_Contig77:95911..99901+ (Pylaiella littoralis U1_48)
ATGCTTGTATGGAAGGGTGACCGACTGCTGATGGCACTCTCCATGTTGGG
CGTCGTCCGCTGCTACGTTTCTCCCAGTTTGGGTGGCGTCTATTCTCAAA
GGGCCGCGCAGCAGCGGCTACACAGAAGGTCGCGGTCAACAGGTGATCGT
AGCAATAATGATGTTGTGAACCCCAAAACAAGCGGCGGGGGCGCTGGTGC
GGGTACTGTCGAACAAGGCAGCCACGTAGACGCGTGGGACACGTGGGAGT
TCGGCACTTGGAAGACGCGGACTCACAGTGAAAACATGGCGGAGGCGGCA
GCCCGAGAGGTGGGGGCTGCCAACGTTTCCACGTTGAAAGGAACAGGGGC
ATTAGTGGACCAAAGTTCCTCCGACCTCGACCGCGCAGTAGACCTGCTGA
AGGGCTATATGTCGGGGGACCGGATGTCGCGGATGCAAGACGTTCTCGAC
CAGCGCACGAGAAGTGCGACGATGGTGTTCGAGAACCCTGCTAACCCGAA
CAACGTATGGGCGTGCCTCCGAACTCTCGACTCGTTCGGGATCCAGCACG
CGCACATCGTGTCGGACCCTTCAACGTACTCCAAGAAAGCCCGGCTCAAG
ACCATGTGCACCGCAATGGGCAGCCAGAAATGGCTGAGTCTTCACGGACA
CGACACCCCTGAGGATGCCGTGGCTAAACTGAAGGCAGACGGGTACCAGG
TGGTTGCAAGCGACCTTTCCCCGTCCGCCGTGCCCATCGGAGATATAGAC
TGGTCGGTACCGACGGCTGTGGTTCTGGGGAACGAAGAGCGGGGAATATC
GGACTCGATGAGAAATATGGCGGACGCCACGTTCGTGATACCGATGAGGG
GGTTCGTCCGATCGTTCAACATGTCGGTCGCGTGCTCCATCATTCTGGCA
CATCTAAGCGCCGTCAGGGCTCTGAAGCATGGCGACCTCCCGGAAGACGA
ACGAAAACGGGTGATCGTGACCTGGCTCATGCAGTGCGTCCGGGGGTCGG
AGCACGTCCTCAGACGAGAAGGCATCGACATACCCCAGGAGATATTTGGG
ACCGATAAGGAGAGGCCGGAGAACATTGCCGGCTACCGTGTGCGATGA
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