mRNA_P-littoralis_Contig77.32.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI) HSP 1 Score: 636 bits (1640), Expect = 1.790e-223 Identity = 316/367 (86.10%), Postives = 341/367 (92.92%), Query Frame = 1
Query: 37 MLVWKGDRLLMALSMLGVVRCYVSPSLGGVY--SQRAAQQRLHRRSRSTGDRSNNDVVNPKTSGGGAGAGTVEQGSHVDAWDTWEFGTWKTRTHSENMAEAAAREVGAANVSTLKGTGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGYRVR 1131
ML+W+GDRLLMALS LG+VRCY+SP LGG Y S R+ QQRL+RRSRSTGDRS+NDVV+PKTSGGGA VEQ SHVD WDTWEFGTWKTRTHSEN+AEAAAR G A VST GT ALVDQ++SDL+RAVDLLKGY+S DR+SRM+DVLDQRTRSAT+VFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSK+ARLKTMCTAMGSQKWL+LHGHD PEDAVAKLK DGYQVVASDLSPSAVPI +IDWSVPTAVVLGNEERGISDSMR+MADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDER+ V VTWLMQCVRGSEH+L+REGIDIPQEIFGTDK+RP+NIAGYRVR
Sbjct: 1 MLIWRGDRLLMALSTLGLVRCYLSPRLGGTYPCSSRSVQQRLYRRSRSTGDRSSNDVVSPKTSGGGA----VEQDSHVDEWDTWEFGTWKTRTHSENVAEAAARAAGPAKVSTFIGTRALVDQTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA) HSP 1 Score: 251 bits (642), Expect = 4.300e-75 Identity = 126/249 (50.60%), Postives = 168/249 (67.47%), Query Frame = 1
Query: 379 TGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGY 1122
T L + ++++RA++ L+ + +R+ R+QDVL++RT VFENP+NPNNVWA LRT+DSFGIQ+ H+++DP Y KK RL TM +AMGSQKWLSLHGHD+ D LKA GY+++ S L P AVP+ IDWS AV GNE+ G+S+ + D TF IPMRGF SFN+SVA SI+LA +A L+ GDL E ER+ V + WL++ V E VL+REGI +PQ + E E IAG+
Sbjct: 7 TQLLAEMPVAEMERAIEALERFTQPERLGRLQDVLNKRTAHLCTVFENPSNPNNVWAALRTIDSFGIQNVHVIADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMRGFAESFNVSVALSIVLASAAAGGGLRGGDLGEGERRAVYLRWLLRTVAAGESVLQREGIALPQSMSLRRTE--EGIAGF 253
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC) HSP 1 Score: 223 bits (567), Expect = 3.430e-63 Identity = 112/242 (46.28%), Postives = 153/242 (63.22%), Query Frame = 1
Query: 409 DLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLK-TMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGTDKERPENIAGYRVR 1131
D + AV+ L +S DR+ R+Q V+ QRT VFE P NPNNVWACLRTLDSFGIQH ++ P Y ++ + M A+GS +WLS+ + +A+ +LK G +V ASDL + + +D S P +VLGNE GIS+ MR +AD TF +PMRGF SFN+SVAC++ A+LS + LK GDL E ER V+ WLM+CV GS+ VL R+G+ +P+ + T ++R G R R
Sbjct: 87 DYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVPERLRRT-RQRLLGCEGVRKR 327
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA) HSP 1 Score: 216 bits (550), Expect = 9.850e-62 Identity = 109/249 (43.78%), Postives = 163/249 (65.46%), Query Frame = 1
Query: 394 DQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSP--SAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQE-IFGTDKERPENIAGYRV 1128
D+ D+ A + L + + R+ R++D++++RT+S VFEN ANPNN+WACLR+LD+FG+Q+AH++ D + Y K RL +AMGSQKWL++ H + VA LK +GY V+ASDL P S P+ ++ W+ A+V+GNEERGI++ MR++ D TF IPM GF SFN+S + ++ LA +S++ LKHGDLP E+ +++ WL++ V +LRREG+ I E I T K + GY +
Sbjct: 8 DRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERILPTSKV----VLGYNL 252
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.140e-60 Identity = 116/293 (39.59%), Postives = 176/293 (60.07%), Query Frame = 1
Query: 271 WDTWEFGT---W---------KTRTHSENMAEAAAREVGAANVSTLKGTGALVDQSSSDLDR-------AVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSP--SAVPIGDIDWSVP-TAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIF 1083
+D WEFG W + + H + ++ +E +G +D D DR A + L + + R+ R++D++++RT+S VFEN ANPNN+WACLR+LD+FG+Q+AH++ D + Y K RL +AMGSQKWL++ H + VA LK +GY V+ASDL P S P+ +++W+ A+V+GNEERGI++ MR++ D TF IPM GF SFN+S + ++ LA +S++ LKHGDLP E+ +++ WL++ V +LRREG+ I E F
Sbjct: 95 FDNWEFGVNAGWSGENNGRSLRIKQHGDGSTQSVGKEA-----EEREGENHNMDHEEED-DRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERF 381
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV) HSP 1 Score: 207 bits (528), Expect = 1.200e-56 Identity = 113/234 (48.29%), Postives = 154/234 (65.81%), Query Frame = 1
Query: 418 RAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARLKT---MCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV-PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-----ALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEIF 1083
RA D+L+ ++ DR R+ VL QRT+ +FENP+NP+NVWACLRT+DSFG+Q+ +V D Y K ++ M TAMGS KWLSL H + E+AV +KA+GY++ ASDL+P++ + ++DW V P VV+GNEERGISD MR MAD TF +PM GF SFN+SVA SI LAH+SA AL+ GDL E + + L+ + + +L++EGI +P EIF
Sbjct: 174 RATDILRPFVGDDRYERIDSVLRQRTKRTKFLFENPSNPSNVWACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHELACLRLKGLLGSLPKRKLGPILLKQEGIVLP-EIF 406
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S1Y6X6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X6_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.640e-54 Identity = 116/273 (42.49%), Postives = 166/273 (60.81%), Query Frame = 1
Query: 316 ENMAEAAAREVGAANVSTLKGTGALVDQSSSDL-DRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKK---ARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV----PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRA-------LKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
+ +AE+ ARE A + L+ D S DL RA + L+ ++ DR RM+ VL QRT++ +FENP+NP+NVWACLRT+DSFG+Q +V Y K A+ + TAMGS +WLSL H T AVAKLK++GY++ ASDL+P++ + D+DWS P +V+GNE RGIS MR +AD TF +PM GF SFN+SVA +I LAHLSA L+ GD+ E E R+++ ++ + R + +L+R + +P +
Sbjct: 106 KELAESEAREDEKA-LEKLRRYWDAWDSLSPDLVARATETLRPFIREDRAERMESVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQDVDLVVQSGQYEGKGAIAQKSGLRTAMGSAQWLSLTNHPTTASAVAKLKSEGYKLYASDLNPNSKDVRDVDWSADGDRPICIVMGNEGRGISQEMRELADETFTLPMCGFAESFNLSVATAITLAHLSAKSGHENQEGPLRPGDMDEHEYNRLLLKGIIFSLPQRRTARALLKRNNVVLPNAL 377
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.590e-53 Identity = 101/243 (41.56%), Postives = 156/243 (64.20%), Query Frame = 1
Query: 418 RAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARL---KTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDWSV---PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-------------ALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
+A++ L+ +++GDR+ R+ VL QRT+ + +FENP+NP+NVWACLRT+DSFG+Q+ ++ D Y+ K + K M TAMGS +WL+L H T ++A+ +++ G+++ ASDL+P++ + DIDW P +V+GNE+RGIS MR MAD TF +PM GF SFN+SVA SI LAH+SA L+ GDL E E + + L+ + R S+ +L++ G+++P +
Sbjct: 138 KAIETLEPWINGDRLERVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGMQNVDVIIDSGRYAGKQAISQKKGMRTAMGSAQWLTLTNHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAGVELPDAL 380
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A8J2SJW7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJW7_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.940e-52 Identity = 110/258 (42.64%), Postives = 148/258 (57.36%), Query Frame = 1
Query: 367 TLKGTGALVDQSSSDLDRAVDLLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDP----------------STYSKKARLKTMCTAMGSQKWLSLHGHDTPEDAVAKLKADGYQVVASDLSPSAVPIGDIDW-SVPTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERKRVIVTWLMQCVRGSEHVLRREGIDIPQEIFGT 1089
TL G A+V RAV +L Y+S +R Q V+ QRTR ++ FE P+NP+NVWACLRT+D+FG Q HIV D T + R K M +AMG+QKWLSL H + V+KLK++G V A+DLSP AV ++DW S A+V GNEE GISD +R +AD +PMRG S N+SV+ LAH+ A AL DL +ER +++ W + VR +LRREG+++ Q + T
Sbjct: 63 TLTGDAAVVR-------RAVSILAPYVSDERRDTFQRVVQQRTRHLSVAFERPSNPSNVWACLRTIDAFGCQDVHIVEDSLEEAAKRAAARGVHADPTQRMRGRKKRMTSAMGAQKWLSLEAHADAQALVSKLKSEGRIVAATDLSPGAVDFSEVDWASGKHALVFGNEEVGISDELRELADVRVRLPMRGLAESLNLSVSVGAALAHVDAKGALV-PDLTVEERDLLLLRWSLLSVRAGRELLRREGVELDQGVLKT 312
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Match: A0A7S4VNE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VNE4_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.310e-51 Identity = 103/239 (43.10%), Postives = 154/239 (64.44%), Query Frame = 1
Query: 430 LLKGYMSGDRMSRMQDVLDQRTRSATMVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKKARL---KTMCTAMGSQKWLSLHGHDTPEDAVAKLKAD-GYQVVASDLSPSAVPIGDIDWSV-PTAVVLGNEERGISDSMRNMADATFVIPMRGFVRSFNMSVACSIILAHLSA--------------VRALKHGDLPEDERKRVIVTWLMQCV---RGSEHVLRREGIDIPQEI 1080
+L+ Y++ DR+ R+ VL QRT++ +FENP+NP+NVWACLRT+DSFG+Q+ +V + Y KA + + M TAMGS +WLSL + T DAV +++ + GY++ ASDL+P++ + D+DW V P VV+GNE+RGIS+ MRN+AD TF +PM GF SFN+SVA ++ LAH+SA L+ GDL E E + + L+ + R +L+++GI +P +I
Sbjct: 136 ILEPYINADRLERIDSVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQNVDLVINSGLYEGKAAISQKRGMRTAMGSAQWLSLRNYMTTADAVREIREEKGYKIYASDLNPNSKDVRDLDWDVGPICVVMGNEDRGISEEMRNLADETFTLPMVGFAESFNLSVATAVTLAHMSASSRQKEVEGGETIVTGPLRPGDLDEHEFNCLRLKGLLNSLPQRRTGPALLKQKGIVLPDDI 374 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.32.1 >prot_P-littoralis_Contig77.32.1 ID=prot_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp MLVWKGDRLLMALSMLGVVRCYVSPSLGGVYSQRAAQQRLHRRSRSTGDRback to top mRNA from alignment at P-littoralis_Contig77:95911..99901+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.32.1 ID=mRNA_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3991bp|location=Sequence derived from alignment at P-littoralis_Contig77:95911..99901+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:95911..99901+ >mRNA_P-littoralis_Contig77.32.1 ID=mRNA_P-littoralis_Contig77.32.1|Name=mRNA_P-littoralis_Contig77.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1098bp|location=Sequence derived from alignment at P-littoralis_Contig77:95911..99901+ (Pylaiella littoralis U1_48)back to top |