mRNA_P-littoralis_Contig1194.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1194.10.1
Unique NamemRNA_P-littoralis_Contig1194.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: D7FSJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ6_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 4.930e-36
Identity = 92/184 (50.00%), Postives = 117/184 (63.59%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE------AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGT-AKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHE 541
            D +M RP+P+FDDL+AI  GKS + S  E      AIPA+ +L  R  + +V V R+S+ PF F   +Y  ADL+  MD ED  E    G  +  S  TGS      XXXXXXXXXX  G+  +RKGPHCMMRLVGIL ED +RPLL D+R QA   +LD S VG R+++W   ++RFRDPDH+
Sbjct:   26 DSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHK 209
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: D8LJH4_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH4_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.550e-29
Identity = 84/184 (45.65%), Postives = 112/184 (60.87%), Query Frame = 2 
Query:    5 ARDKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHE 541
            + D +M RP P++DDL AI  GKS +++ +E     AIPA+ +L  R+ + +V + R+S+ PF+    EY VADL+  +  ED  EA                     XXXXXXXXXX     +RKGPHCMMRLVGIL ED +RPLL ++RLQA    LD S+VG R+E+W   + RFRDPDH+
Sbjct:  178 SHDGNMNRPCPYYDDLNAITAGKSGRRNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQ 359
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.100e-29
Identity = 84/184 (45.65%), Postives = 112/184 (60.87%), Query Frame = 2 
Query:    5 ARDKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHE 541
            + D +M RP P++DDL AI  GKS +++ +E     AIPA+ +L  R+ + +V + R+S+ PF+    EY VADL+  +  ED  EA                     XXXXXXXXXX     +RKGPHCMMRLVGIL ED +RPLL ++RLQA    LD S+VG R+E+W   + RFRDPDH+
Sbjct:   55 SHDGNMNRPCPYYDDLNAITAGKSGRRNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQ 236
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 6.560e-29
Identity = 85/185 (45.95%), Postives = 115/185 (62.16%), Query Frame = 2 
Query:    5 ARDKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGT-AKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHE 541
            + D +M RP P++DDL AI  GKS +++ +E     AIPA+ +L  R+ + +V + R+S+ PF+    EY VADL+  +  ED    A +G                 XXXXXXXXXX  G+  +RKGPHCMMRLVGIL ED +RPLL ++RLQA    LD S+VG R+E+W   + RFRDPDH+
Sbjct:  178 SHDGNMNRPCPYYDDLNAITAGKSGRRNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKEDE---AGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQ 359
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.000e-28
Identity = 85/182 (46.70%), Postives = 111/182 (60.99%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGT-AKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDH 538
            D +M RP+P+FDDL+AIV GKS + S  E      IPA+ +L  R  + +V + R+ + PF     +Y VADL+  M+ E+  E         E  A G       XXXXXXXXXX  G+  +RKGPHCMMRLVGIL ED +RPL+ ++RLQA   +LD SAVG R  +W   ++RFRDP H
Sbjct:   83 DANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRH 256
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.310e-27
Identity = 84/182 (46.15%), Postives = 110/182 (60.44%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGT-AKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDH 538
            D +M RP+P+FDDL+AI  GKS + S  E      IPA+ +L  R  + +V + R+ + PF     +Y VADL+  M+ E+  E         E  A G       XXXXXXXXXX  G+  +RKGPHCMMRLVGIL ED +RPL+ ++RLQA   +LD SAVG R  +W   ++RFRDP H
Sbjct:  245 DANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRH 418
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.770e-27
Identity = 83/182 (45.60%), Postives = 109/182 (59.89%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGT-AKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDH 538
            D +M RP+P+FDDL+AI  GKS + S  E      IPA+ +L  R  + +V + R+ + PF     +Y V DL+  M+ E+  E         E  A G       XXXXXXXXXX  G+  +RKGPHCMMRLVGIL ED +RPL+ ++RLQA   +LD SAVG R  +W   ++RFRDP H
Sbjct:  245 DANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRH 418
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5JD97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD97_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 9.460e-27
Identity = 82/182 (45.05%), Postives = 105/182 (57.69%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE-----AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDN-RLQANCAQLDASAVGSRSEVWQVASERFRDPDH 538
            D +M RP+P+FDDL+AI  GKS + S  E      IPA+ +L  R  + +V + R+ + PF     +Y VADL+  M+ ED  E     G                XXXXXXXXXX     +RKGPHCMMRLVGIL ED +RP +T+N RLQA   +LD SAVG R  +W   ++ FRDP H
Sbjct:   83 DANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXX-------XXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPRVTNNSRLQATRQELDTSAVGPRKHLWTEVTDCFRDPRH 257
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 4.250e-26
Identity = 85/191 (44.50%), Postives = 112/191 (58.64%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE------AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYD-VADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHEELVRLAV 562
            D +M RP+P+FDDL+AI  G+S + S  E      AIPA  +L  R  + +V + R+S+ PF     +Y  VADL+  M+ ED  E     G                XXXXXXXXXX     +RKGPHCMMRLVG+L ED +RPL+ ++RLQA   +LD SAVG R  +W   ++RFRDP H   VR++V
Sbjct:   87 DANMKRPSPYFDDLDAIAAGESGRGSEQEEGEEEGAIPASALLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPELEDSAGXXXXXXXX-------XXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHN--VRISV 268
[Close]
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Match: A0A6H5KIT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.890e-25
Identity = 73/184 (39.67%), Postives = 97/184 (52.72%), Query Frame = 2 
Query:   11 DKSMGRPTPFFDDLEAIVEGKSRKKSTDE------AIPAEVVLALRSTLTLVRVDRNSSTPFKFGPREYD-VADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAXXXXXXXXXXGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLDASAVGSRSEVWQVASERFRDPDHE 541
            D +M RP+P+FDDL+AI  GKS + S  E      AIPA  +L  R  +  V + R+ + PF     +Y  VADLF  M+ +D +E    GG        G                      +RK PHCMMRLVGIL ED +RPL+ ++RLQ    +LD SAVG R  +W   ++RFRDP H+
Sbjct:  226 DANMKRPSPYFDDLDAIAAGKSGRGSEQEGGEEEGAIPANALLMFRGVVNTVALARDRTEPFTVEGVDYSSVADLFDAMEKDDKLELT--GGICRREFVDGCI-------------------TERKDPHCMMRLVGILCEDFIRPLVINSRLQVTRQELDTSAVGPRKHLWTEVTDRFRDPRHD 388
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1194.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSJ6_ECTSI4.930e-3650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJH4_ECTSI1.550e-2945.65Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
D7FJ39_ECTSI3.100e-2945.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU69_ECTSI6.560e-2945.95Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JZX9_9PHAE4.000e-2846.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7W8_9PHAE1.310e-2746.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFU0_9PHAE5.770e-2745.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD97_9PHAE9.460e-2745.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNY9_9PHAE4.250e-2644.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIT8_9PHAE3.890e-2539.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1194contigP-littoralis_Contig1194:11830..13799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSJ6
Model size1046
Max annot lvl2880.D7FSJ6|-
Hectar predicted targeting categoryother localisation
Exons3
Evalue7.55e-38
EggNOG OGs2EJXG@1|root,2SPZB@2759|Eukaryota
Cds size615
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789502.5033233-UTR-P-littoralis_Contig1194:11829..118481680789502.5033233-UTR-P-littoralis_Contig1194:11829..11848Pylaiella littoralis U1_48UTRP-littoralis_Contig1194 11830..11848 +
1680789502.5466812-UTR-P-littoralis_Contig1194:13387..137991680789502.5466812-UTR-P-littoralis_Contig1194:13387..13799Pylaiella littoralis U1_48UTRP-littoralis_Contig1194 13388..13799 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789502.514031-CDS-P-littoralis_Contig1194:11848..118971680789502.514031-CDS-P-littoralis_Contig1194:11848..11897Pylaiella littoralis U1_48CDSP-littoralis_Contig1194 11849..11897 +
1680789502.5270822-CDS-P-littoralis_Contig1194:12538..130111680789502.5270822-CDS-P-littoralis_Contig1194:12538..13011Pylaiella littoralis U1_48CDSP-littoralis_Contig1194 12539..13011 +
1680789502.5374804-CDS-P-littoralis_Contig1194:13294..133871680789502.5374804-CDS-P-littoralis_Contig1194:13294..13387Pylaiella littoralis U1_48CDSP-littoralis_Contig1194 13295..13387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1194.10.1prot_P-littoralis_Contig1194.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1194 11849..13387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1194.10.1

>prot_P-littoralis_Contig1194.10.1 ID=prot_P-littoralis_Contig1194.10.1|Name=mRNA_P-littoralis_Contig1194.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp
MGRPTPFFDDLEAIVEGKSRKKSTDEAIPAEVVLALRSTLTLVRVDRNSS
TPFKFGPREYDVADLFAIMDAEDAVEAAAEGGESSESRATGSCGGTAAGA
GGGGAAGAGVGTAKRKGPHCMMRLVGILVEDDVRPLLTDNRLQANCAQLD
ASAVGSRSEVWQVASERFRDPDHEELVRLAVRIILPCGSFEAEDRPERRA
NQLE*
back to top

mRNA from alignment at P-littoralis_Contig1194:11830..13799+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1194.10.1 ID=mRNA_P-littoralis_Contig1194.10.1|Name=mRNA_P-littoralis_Contig1194.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1970bp|location=Sequence derived from alignment at P-littoralis_Contig1194:11830..13799+ (Pylaiella littoralis U1_48)
GACCGCGAGAGACAAAAGCATGGGCAGGCCTACGCCTTTCTTCGACGATC
TCGAGGCCATCGTTGAAGGTGAGCTGCTGTGGATTTGTTGCGACGAGATA
TTTGTCCTAGCCGTGAAGACGGAATGAGAGCAAAAATGGTCTTGACTGCT
GCTGTAGGCGTGTGCATGTTGAAATTTACACTGCTGTACGTACGTAGACT
ATATCGAGAGTTTTTCAAATTTAAATTTCAAACCAGCAGCAGCAGTAGCG
AAATGACTGCCGTTGTTGAATGTCGTGTGTTTGTCCACGTTGTCATCTTC
TCGTCAACAACGGCAGTGCGTCCTCGTGGTGGTAAATGGTTTCGACAGAA
CCGTCATTATGGTACCGCAGAAAGCGAACCGCCACTTGCCCCACAACTCG
TTTGCATGTGTGTACTTGAATTTTGCTCAGCGGGGATATCGTGCTTTTCG
TCATCATGTTCTCCGTTGCTGTCAAGTGCAGCATAAAATACAGGGATGTT
CGCACCGGGGTGCGACATCTGGTACAACCGAGCGCTACTAGTACCTTGTG
GTTCAAAACATATAGTTGGAAATTGAGAAGTCGCCGACACGCAGCAGCGC
CACTTCTTGCATGTCATCTACTTCCGTGCATGTTTGTAACGTTGCCGCGT
ACATTTTACTGTTTTATGCGGACATTTTTTTTCTCGCAAATATGTCGAAC
CCAATCCAGGCAAATCCCGCAAGAAGTCCACGGATGAGGCAATCCCCGCC
GAGGTAGTTCTCGCGCTCCGGTCCACGTTGACGCTGGTTCGCGTCGACCG
CAACTCGAGTACGCCCTTCAAGTTCGGGCCGAGAGAGTACGACGTAGCCG
ACCTCTTCGCCATCATGGACGCCGAAGACGCCGTCGAGGCTGCGGCAGAG
GGCGGAGAAAGTTCCGAGAGTCGTGCCACCGGGTCGTGCGGCGGCACTGC
TGCGGGGGCGGGGGGTGGCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGA
AGCGGAAAGGGCCGCACTGCATGATGCGGCTCGTCGGCATTCTCGTAGAG
GACGACGTTCGCCCGCTGCTCACAGACAATCGGCTTCAGGCGAATTGTGC
TCAGCTTGATGCCTCTGCGGTGGGATCACGCAGCGAAGTGTGGCAAGTCG
CCTCGGAACGCTTCAGGGACCCTGACCACGAGGTAACACTAGTGGAGGGG
GAACACCCCCTCCGCCGGTAGTGACGATGGCATGAATATGTGATGTACCA
ACTTGTTTTTCGCGCTGCATCCAGTAAGCCGTGTGTATACATTGTTTTGT
TTTCATCACAGCGGTTCCAGGGGCAGGTCTGACCCCGGTTGGTCATCGGC
ACCCAGATTCGTGTAGCACCGACACACGCGAAATTTCGCCCGCACCATGA
ACATGATACCTCTCCCTCTTCAACCGATCGCTCCCGACTCTTAACCCTTT
CGTGACTTCGGTAAGGAATTGGTGAGGTTAGCAGTGAGGATTATTCTTCC
TTGCGGTAGTTTTGAGGCTGAGGACCGCCCCGAAAGAAGGGCGAACCAGC
TCGAATAGATCGTATTTTCACCCGCCGAGCAAGGACCGGGGCTTGCGGAG
CAGAGCCCCTGCTTATAAAAATGATGTGGAGGGAGTTGCACAGCTAGCTG
CTGAGGTCAGCACCAGAGGACAGCAGTCCCGTCCTTGGCCGCAGCTCAGG
CGCCATACGAGCGAACATCCGTACCCATGAGTTTTTTTTTTCACCCTGCT
AGTTATGGTATTTGGCCCGAGACCCATGTCTGCTGCAGTCGACAGCCAGG
GACATGTTCCTGTGACTGGCGTGGGGACAGCACCGAGAGAGCAGCTTCCG
CGAAGTGCCGTTCTTGGAAGAGAGGCATGTGCCCACCATGGCGGTGTGCT
TGGCATGCGACTTGATTGCGCTGTGCAAAAGAAGGCCTCCCGCAACGCGT
TTGTTCCAAGAGCTGGGGCT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1194:11830..13799+

>mRNA_P-littoralis_Contig1194.10.1 ID=mRNA_P-littoralis_Contig1194.10.1|Name=mRNA_P-littoralis_Contig1194.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig1194:11830..13799+ (Pylaiella littoralis U1_48)
ATGGGCAGGCCTACGCCTTTCTTCGACGATCTCGAGGCCATCGTTGAAGG
CAAATCCCGCAAGAAGTCCACGGATGAGGCAATCCCCGCCGAGGTAGTTC
TCGCGCTCCGGTCCACGTTGACGCTGGTTCGCGTCGACCGCAACTCGAGT
ACGCCCTTCAAGTTCGGGCCGAGAGAGTACGACGTAGCCGACCTCTTCGC
CATCATGGACGCCGAAGACGCCGTCGAGGCTGCGGCAGAGGGCGGAGAAA
GTTCCGAGAGTCGTGCCACCGGGTCGTGCGGCGGCACTGCTGCGGGGGCG
GGGGGTGGCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGAAGCGGAAAGG
GCCGCACTGCATGATGCGGCTCGTCGGCATTCTCGTAGAGGACGACGTTC
GCCCGCTGCTCACAGACAATCGGCTTCAGGCGAATTGTGCTCAGCTTGAT
GCCTCTGCGGTGGGATCACGCAGCGAAGTGTGGCAAGTCGCCTCGGAACG
CTTCAGGGACCCTGACCACGAGGAATTGGTGAGGTTAGCAGTGAGGATTA
TTCTTCCTTGCGGTAGTTTTGAGGCTGAGGACCGCCCCGAAAGAAGGGCG
AACCAGCTCGAATAG
back to top