mRNA_P-littoralis_Contig769.37.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig769.37.2
Unique NamemRNA_P-littoralis_Contig769.37.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: UPI0014450A21 (uncharacterized protein n=1 Tax=Daldinia childiae TaxID=326645 RepID=UPI0014450A21)

HSP 1 Score: 120 bits (300), Expect = 1.720e-26
Identity = 89/295 (30.17%), Postives = 141/295 (47.80%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDEGNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVV-DIAVYGEI------MGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQAPTWELIAFSGGTMYGYEG-GVVWILEIDLVTGTYTANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELA 861
            GD YL+VGTAVWRK      +  L +   +W  +++  W+++GD+V PAD + D+  + ++      +G++L       N    I+V+  D       + G N    N  S     DD   S  P W  +A+   ++   +     W L+++   GTYT   +       E    D+G V   +DG LY+R++ +   D T+    +++                 WV   D +  +GV+SPG    LR L   LK R++++QT LYPLV KI AFS  H+FYLD LR  +++ A
Sbjct:  226 GDFYLSVGTAVWRKRHIFPHESTLTQSVGNWPKLYRNDWERIGDSVFPADDLRDVIPFAKLNPTRREVGFELL----ILNQDSSIQVLAKDD------IYGSN--TWNTISYIKGKDD--PSAPPMWSRMAYWSNSIVALDDQNNTWSLKVNFEAGTYTIADKTPIESTSEFTATDLGPVTVRSDGYLYKRYLQDPPSDGTDPAVKWSK-----------------WVRQ-DGVTNLGVASPGVVLDLRVLTRTLKERYIETQTTLYPLVNKINAFSIAHTFYLDNLRETADKWA 488          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A1Y2H2T1_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H2T1_9FUNG)

HSP 1 Score: 109 bits (272), Expect = 8.280e-23
Identity = 75/286 (26.22%), Postives = 134/286 (46.85%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDEGNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGS-SQAPTWELIAFSGGTMYGYE-GGVVWILEIDLVTGTYTANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSE 852
            GD  LA+G AVWRK     D+  L +   +W  ++Q  W K+GD VLPA  +   +   ++  D           ++  +V+L A   + ++   +  + N    PL F      +  P W  IA+    + GY+    V+ L++     ++T + +     + E+   + GLVV  +DG LY+R +      D +  + + +                 W++  D +  +GV+SPG    L  L   L+SR+++ QT +YP+V+ I+AF   H++YL  L+T ++
Sbjct:  217 GDICLAIGQAVWRKLHYK-DETDLKKAVDNWPNMYQASWVKVGDNVLPAADLRSVIPFAVLSAD--------RQNIDFHLVVLKADSSMAVLTSDD-LINNASFNPLTFGPSKEITTEPKWSRIAYWDNQIVGYDDANNVYNLDVKFSANSFTVSDKTPDTTITELTATEAGLVVARSDGFLYKRLISIPKDADKDATFSWTK-----------------WISQ-DGVTNLGVASPGVILDLNLLTRTLRSRYIEVQTAVYPMVDGIRAFCVTHNYYLQQLQTAAD 474          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A0C3S5U5_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S5U5_PHLGI)

HSP 1 Score: 108 bits (271), Expect = 1.120e-22
Identity = 82/299 (27.42%), Postives = 137/299 (45.82%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDEGNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKL-HLVQGGNGPLTNFESTPLEFDDGGSSQAPTWELIAFSGGTMYGYEGGVV-WILEIDLVTGTYTANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELAGAAPTSDVAL 891
            GD YL+VG +VW+K   +  D A+ +  ++W A++   W  +G +VLPA   D+A    ++ + L +P  T   ++   +V L A G L +L      P   +E  P EF     S  P W  +A+  G + G +     W +      GTYT +       V E    + GLV   +DG L++R V+                +  P  +  A      W+   D +  +GV+SPG    +  L   L++R++  QT +YP+V++++AF   H F+LD +   ++    A+     AL
Sbjct:  216 GDFYLSVGASVWKKAHISERDPAIRDAVNNWPALYVKEWTHVGSSVLPAS--DLA---GVVPFALLNPDRT---ELSFHLVTLAADGSLSYLTNDTIAPGNKYE--PFEFKGSSGSTPPKWTKVAYWDGHLVGIDSSSKSWNIAPKFPDGTYTISDESPIDPVTEFTATEAGLVGLRSDGFLWRRLVE----------------APPPGSDEDASLKWAKWIKA-DGVTNLGVASPGVLLDMNLLTNTLRTRYIDVQTSVYPVVDRLRAFGLTHVFWLDAVAKDADAWLNASTPEQQAL 487          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A4Q4QQM8_9PLEO (Uncharacterized protein n=1 Tax=Alternaria tenuissima TaxID=119927 RepID=A0A4Q4QQM8_9PLEO)

HSP 1 Score: 102 bits (253), Expect = 2.540e-20
Identity = 91/319 (28.53%), Postives = 147/319 (46.08%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDE------GNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQA-PTWELIAFSGGTMYGYEGGV-VWILEIDLVTGTYTANTRIVAGE-VLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVS----EELAGAAPTSDVALETGTTHITH 918
            GD Y+++G  VW K        G A D  L +   +W  ++   W  +GD  LPAD + IAV    M Y +    S   + +E  +VLL+    L ++ G +   TN E   L F       + P W+L+ +    + GY+     W L+ D    +YTA+ +    E + E+   + G V   ADG L++R V     DD    Y +                   W+ V D+++ +GV+SPG    L  L   L+SR++++QT + PL+ K++AF   H+ YL  L+  +    +    AA  +D A++ G   +TH
Sbjct:  218 GDFYMSIGKKVWYKKHREGIKAGVAGDPELAKAVDNWPYMYDNDWIHVGDQALPADDL-IAV----MPYTVL---SADRSAIEFHLVLLNRDSTLQVLTGDSIKDTN-EFANLSFKASQKVPSRPQWQLMTYWNDQLVGYDNEQNFWNLKPDFGGRSYTASDKTKLVEPISELTATEQGPVAIRADGQLWKRLVQPPQNDDDPGSYAWK-----------------AWIKV-DRVKNIGVASPGVLLDLHLLTSTLRSRYIETQTAVIPLMNKMRAFGLTHTVYLKQLKDAANTWIDNPDDAAKQAD-AIKQGRGFVTH 508          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A364MST1_9PLEO (Alpha-amylase type a isozyme n=1 Tax=Stemphylium lycopersici TaxID=183478 RepID=A0A364MST1_9PLEO)

HSP 1 Score: 100 bits (248), Expect = 1.150e-19
Identity = 86/318 (27.04%), Postives = 139/318 (43.71%), Query Frame = 1
Query:    1 GDTYLAVGTAVW-RKDEGNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDG--GSSQAPTWELIAFSGGTMYGYE-GGVVWILEIDLVTGTYTANTRIVAGE---VLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVN--VPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELAGA---APTSDVALETGTTHITH 918
            G+ Y+A GT +W RK     D     +  ++W  ++   W+ +GD  LP+        G     D         A V+ ++V L + G+L ++Q  +   +N  S       G   SS  P+W  IA + G   GY+ G  +W +  D  + TYT   +          E    D+GLVV   DG LY+R                  +S AP  N  A      W+     + ++ +GV+SPG    L +L  +LK+R+L++Q  L+P+V  IK F+  H  +L  +   +++ + A   A    +AL+ G   I H
Sbjct:  220 GNLYIANGTKLWVRKCRPKGDPVLEKQACNNWPKMYYDTWEHLGDNALPS--------GNFTSID---------AAVKFQLVALTSEGELQVLQQESLGSSNTFSAMSYVASGKNASSTPPSWLRIALNNGKFIGYDRGSNLWDIVPDFTSNTYTTENKYTLDHEDVFTEYTANDIGLVVAKKDGFLYKRIAAT------------VDASAAPKDNEAAPAEKTKWIKWIAQEGVKNLGVASPGIILDLLTLTNSLKTRYLETQATLWPVVNTIKTFAGTHRVFLQQVNQAAKDFSVADSDAEKEKLALKVGKKAIGH 508          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A0C9M2A7_BLOB1 (Uncharacterized protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0C9M2A7_BLOB1)

HSP 1 Score: 99.8 bits (247), Expect = 1.550e-19
Identity = 79/320 (24.69%), Postives = 149/320 (46.56%), Query Frame = 1
Query:    4 DTYLAVGTAVWRKDE------GNADDEALIEVASDWTAVHQPGWQKMGDTVLPA-DVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQAPT-WELIAFSGGTMYGYEGGV-VWILEIDLVTGTYTANTRI-VAGEVLEMVGVDVGLVVRLADGLLYQRFVD--NSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELAGAAPTSD---VALETGTTHITH 918
            D Y+++G  VW K        G+  D AL +   +W +++   WQ +GDT LPA D+ +I  +            S   +++   + LL++ G L  +       +N +   L F    ++  P  W  +A+    + G +     W +  +  +GTYT +++  V   + E+   + G V   ADG L++R ++    G+DD ++ +                     W+   + +  +GV+SPG    LR L   L+SR++++QT + PL+ K++A+   H+F+L  L+  S++   A  T D   +A++ G + + H
Sbjct:  224 DFYMSIGQKVWMKAHLPATPAGSQPDAALQKAVDNWPSLYNETWQYIGDTALPAADIKNIVPFSVF---------SADRSQIAFHLALLNSDGTLQYLDADVLQGSNNKWAQLNFSASNNNNTPPKWTSMAYWNNRIVGLDDSQNFWDMTPNWTSGTYTIDSQYKVPQAITELTATEQGPVGVRADGTLWKRILNPPKDGQDDGSYAWS-------------------SWIKQ-NGVTHLGVASPGVMLDLRLLTSTLRSRYIETQTAIAPLMNKMRAYGTTHAFFLKNLKKASDDWNNA-DTDDKQTLAIKNGKSFVVH 513          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: M7UAK2_BOTF1 (Uncharacterized protein n=1 Tax=Botryotinia fuckeliana (strain BcDW1) TaxID=1290391 RepID=M7UAK2_BOTF1)

HSP 1 Score: 97.8 bits (242), Expect = 6.020e-19
Identity = 81/288 (28.12%), Postives = 133/288 (46.18%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDE------GNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQA-PTWELIAFSGGTMYGYEGGV-VWILEIDLVTGTYTANTRIVAGEVLE-MVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYL 837
            GD Y+++G  VW K        G A D  L +   +W  ++   W  +GD  LP D + IAV    M Y +    S   + +E  ++LL+    L ++ G +   TN E   L F     S + P W+L+ +    + GY+     W L+ D    +YTA+ +    E +  +   + G V   ADG L++R V+    DD    Y +                   W+ V D ++ +GV+SPG    L  L   L+SR++++QT + PL+ K+++F   H+ YL+ L
Sbjct:  218 GDFYMSIGKKVWYKKHREGVKGGIAGDPELAKAVDNWPYMYNNDWIHVGDQALPEDDL-IAV----MPYTVL---SADRSAIEFHLILLNRDSTLQVLTGDSIKDTN-EFANLSFKASQESASRPQWQLMTYWNDQLVGYDSEQNFWDLKPDFGGRSYTASDKTKLPEPISGLTATEQGPVAIRADGQLWKRLVEPPKNDDDPGSYAWK-----------------AWIKV-DGVKNIGVASPGVLLDLNLLTSTLQSRYIETQTAVIPLMNKMRSFGITHAVYLEKL 478          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: G2XUF2_BOTF4 (Uncharacterized protein n=2 Tax=Botryotinia fuckeliana TaxID=40559 RepID=G2XUF2_BOTF4)

HSP 1 Score: 97.8 bits (242), Expect = 6.990e-19
Identity = 81/288 (28.12%), Postives = 133/288 (46.18%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDE------GNADDEALIEVASDWTAVHQPGWQKMGDTVLPADVVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQA-PTWELIAFSGGTMYGYEGGV-VWILEIDLVTGTYTANTRIVAGEVLE-MVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYL 837
            GD Y+++G  VW K        G A D  L +   +W  ++   W  +GD  LP D + IAV    M Y +    S  ++ +E  ++LL+    L ++ G +   TN E   L F     S + P W+L+ +    + GY+     W L+ D    +YTA+ +    E +  +   + G V   ADG L++R V+    DD    Y +                   W+ V D ++ +GV+SPG    L  L   L+SR++++QT + PL+ K+++F   H+ YL  L
Sbjct:  281 GDFYMSIGKKVWYKKHREGVKGGIAGDPELAKAVDNWPYMYNNDWIHVGDQALPEDDL-IAV----MPYTVL---SADHSAIEFHLILLNRDSTLQVLTGDSIKDTN-EFANLSFKASQESASRPQWQLMTYWNDQLVGYDSEQNFWDLKPDFGGRSYTASDKTKLPEPISGLTATEQGPVAIRADGQLWKRLVEPPKNDDDPGSYSWK-----------------AWIKV-DGVKNIGVASPGVLLDLNLLTSTLQSRYIETQTAVIPLMNKMRSFGMTHAVYLKSL 541          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A0C3S2C3_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S2C3_PHLGI)

HSP 1 Score: 87.8 bits (216), Expect = 1.630e-15
Identity = 73/285 (25.61%), Postives = 119/285 (41.75%), Query Frame = 1
Query:    1 GDTYLAVGTAVWRKDE-GNADDEALIEVASDWTAVHQPGWQKMGDTVLPA----DVVDIAVYG---EIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQAPTWELIAFSGGTMYGYEGGV-VWILEIDLVTGTYTANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYL 828
            GD YL+VG AVWRK    + D+ AL +  ++W  ++   W  +G+T LPA     VV  A+     + +G+ L   AS G         L+D               + F         G  S AP +  +A+    + G +     W +  +    TYT +T+     V E    D GLV   +DG L++R +                    P  +  A      W+ V D +  +GV+SPG    +  L   L+SR+++ Q  +YP++  ++A+   H  +L
Sbjct:   95 GDFYLSVGRAVWRKAHISDRDESALAQAVNNWPGMYVKDWTHVGNTALPAANLAGVVPFAMLSADSQQIGFQLVTLASDGTLSYLTNSTLVDN--------------STFARLEYRTSSGSPSTAPRFTKVAYWDNQIVGVDNANNTWNITPNWSGHTYTVSTQTPITPVTEFTANDAGLVGLRSDGYLWRRVI----------------QPPPPGSSNDASLTWLRWIRV-DGVANLGVASPGVLLDMNLLTRTLRSRYVEVQVSVYPVMNMLRAWGLTHQVFL 348          
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Match: A0A4S4LMU4_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LMU4_9AGAM)

HSP 1 Score: 66.6 bits (161), Expect = 1.830e-8
Identity = 62/212 (29.25%), Postives = 86/212 (40.57%), Query Frame = 1
Query:  241 VLLDAGGKLHLVQGGNGPLTNFESTPLEFDDGGSSQAP--TWELIAFSGGTMYGYEGGVVWILEIDLVTGTYTANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFARSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSRFLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELAGAA 870
            VL   G  ++L     GP  NFE+       G     P  T  ++  SG                     TY+A   +    V E    D GLV   ADG LY+R V+    D            DA    T        W+   D    +GV+SPG    L  L   L+SR++  QT +YP+V+KI+AF   HSFYL  ++  +E+   A+
Sbjct:  284 VLASDGNIMYLTDDSLGPGANFEAMKYSPAKGSPETPPSATGRILEQSG--------------------CTYSAADPLKIETVTEFTATDAGLVGLRADGYLYKRIVEAPPADS---------QEDATLKWTR-------WIKA-DGTTNLGVASPGVILDLNLLTRTLRSRYIDVQTSVYPVVDKIRAFGLTHSFYLTNVKKDAEDWQNAS 458          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig769.37.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
UPI0014450A211.720e-2630.17uncharacterized protein n=1 Tax=Daldinia childiae ... [more]
A0A1Y2H2T1_9FUNG8.280e-2326.22Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]
A0A0C3S5U5_PHLGI1.120e-2227.42Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A4Q4QQM8_9PLEO2.540e-2028.53Uncharacterized protein n=1 Tax=Alternaria tenuiss... [more]
A0A364MST1_9PLEO1.150e-1927.04Alpha-amylase type a isozyme n=1 Tax=Stemphylium l... [more]
A0A0C9M2A7_BLOB11.550e-1924.69Uncharacterized protein n=1 Tax=Fungal sp. (strain... [more]
M7UAK2_BOTF16.020e-1928.13Uncharacterized protein n=1 Tax=Botryotinia fuckel... [more]
G2XUF2_BOTF46.990e-1928.13Uncharacterized protein n=2 Tax=Botryotinia fuckel... [more]
A0A0C3S2C3_PHLGI1.630e-1525.61Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A4S4LMU4_9AGAM1.830e-829.25Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig769contigP-littoralis_Contig769:64265..67610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog29875.EHK16338
Model size926
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons5
Evalue4.09e-24
EggNOG OGs2EFB7@1|root,2SKIM@2759|Eukaryota,3AGS7@33154|Opisthokonta,3PB9I@4751|Fungi,3QTWT@4890|Ascomycota,21AGJ@147550|Sordariomycetes,3TMUP@5125|Hypocreales
Cds size924
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791584.1880822-CDS-P-littoralis_Contig769:64265..643491680791584.1880822-CDS-P-littoralis_Contig769:64265..64349Pylaiella littoralis U1_48CDSP-littoralis_Contig769 64266..64349 -
1680791584.20513-CDS-P-littoralis_Contig769:65011..652691680791584.20513-CDS-P-littoralis_Contig769:65011..65269Pylaiella littoralis U1_48CDSP-littoralis_Contig769 65012..65269 -
1680791584.217592-CDS-P-littoralis_Contig769:65768..658861680791584.217592-CDS-P-littoralis_Contig769:65768..65886Pylaiella littoralis U1_48CDSP-littoralis_Contig769 65769..65886 -
1680791584.2267306-CDS-P-littoralis_Contig769:66765..671061680791584.2267306-CDS-P-littoralis_Contig769:66765..67106Pylaiella littoralis U1_48CDSP-littoralis_Contig769 66766..67106 -
1680791584.2360106-CDS-P-littoralis_Contig769:67487..676101680791584.2360106-CDS-P-littoralis_Contig769:67487..67610Pylaiella littoralis U1_48CDSP-littoralis_Contig769 67488..67610 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig769.37.2prot_P-littoralis_Contig769.37.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig769 64266..67610 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig769.37.2

>prot_P-littoralis_Contig769.37.2 ID=prot_P-littoralis_Contig769.37.2|Name=mRNA_P-littoralis_Contig769.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=308bp
GDTYLAVGTAVWRKDEGNADDEALIEVASDWTAVHQPGWQKMGDTVLPAD
VVDIAVYGEIMGYDLTDPASTGNAKVEIRVVLLDAGGKLHLVQGGNGPLT
NFESTPLEFDDGGSSQAPTWELIAFSGGTMYGYEGGVVWILEIDLVTGTY
TANTRIVAGEVLEMVGVDVGLVVRLADGLLYQRFVDNSGKDDTNFVYDFA
RSSDAPTGNTMADRMDPGWVNVPDQLQIVGVSSPGAKYTLRSLIGALKSR
FLQSQTVLYPLVEKIKAFSFVHSFYLDYLRTVSEELAGAAPTSDVALETG
TTHITHLN
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mRNA from alignment at P-littoralis_Contig769:64265..67610-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig769.37.2 ID=mRNA_P-littoralis_Contig769.37.2|Name=mRNA_P-littoralis_Contig769.37.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3346bp|location=Sequence derived from alignment at P-littoralis_Contig769:64265..67610- (Pylaiella littoralis U1_48)
GGGGACACCTACCTCGCCGTCGGTACGGCCGTGTGGAGGAAGGATGAAGG CAACGCCGACGACGAGGCCCTAATCGAGGTAGCATCCGATTGGACTGCCG TTCATCAGCCGGGATGGCAAAAGGTGTGTGTTTGGCGCATGAGTCAGCAC AAACCGCAGGGGTTGTCCTCCGCAAGCAACGTTTCCTTCTAGCTGTGTTG CTGTGTCGGCGGGCGTTCCGTTCGCACGAGCCAAAGACGCGTCCGGGATC CCCATCGTGCAGTCAAGAGTATTTGGCGGAGTTTTCTAGTACTCACACGT TCGATACCCGATACGGAACGTGCCAGCAAAGCAGAAGGCGCACACACAGA GTGTGTCATCAAGTTGTGCTCTGGTTGCACTTGAAACAAACTGACAAGCG TGGAGGCCAGAGGAGGCTTCAATTTTTCATAACGGTTTACCTCGTACTCT CTCTGCTCCGCACGCTTGCCCCCCGCCGGCACTGTTGCACAAACCGGAAC CGAGATGGGAGATACTGTCTTGCCTGCCGACGTGGTCGACATCGCCGTCT ACGGGGAAATCATGGGGTACGATCTGACGGATCCCGCGTCGACTGGAAAT GCCAAAGTCGAAATTCGAGTCGTACTGCTGGACGCGGGCGGTAAACTGCA CCTCGTCCAGGGTGGTAACGGGCCTTTAACAAACTTCGAGTCAACGCCCT TGGAGTTTGATGATGGAGGATCGTCGCAGGCCCCGACGTGGGAATTGATT GCCTTCAGCGGCGGAACCATGTACGGGTACGAGGGGGGCGTCGTGTGGAT CCTCGAGATCGATCTCGTCACCGGCACGTACACCGCGAACACTCGGTGAG CGCGAAATCATCCATCGCTTGGTGCAGTCCTCAAAACGGAAGTCGGTAAT TGTTCCTTCTGATGAACGTGTTTGCCCTGGGTCCATGTACAACTTGATTC GTAGGCCTAAACATGCGACTTCTACTGTACGCGTCATAACTCACTGCTCG AAAATGAGGGGAAACGTTCCGCCGTCTATTTTTTAAAAGAGTGGCGTTGC CGACTTCAAAATTACACAACGAAGAAACCTACCCGGGCACCGTTGTGTGG TTGGATTGGTGGGTAGATGGGCCTGAGGTGCGCATTTGGTTGTATTGGCC TGTCAAAGTATTAGAGTTTTATGATATGGAGCATGAGGGGTCTCGGGTAA GACGGACGTTGGGAAGTGAGCTTCGAGCCTTTGCGGAGAGTCGACCTGCT AATAGCTTCCGAGTCAGCGTAGCGAAATATGCCGAATAAAGCTGCGCGGT CGAGGTGACATCCCGCCGTCGTCCACACGCTTAAAACGGACAGACTCGCC GATATAGTACAAAATGCCAAATATCTGTGACAGTCTAGCGCCACCGGATG AACGTTCGTATCTATTTTGACAAATAATTATTGGTGCATAAGGTTTGGCT TTTTCTTTATTTGCTGGACGACGTCTGCGTAGCAGATAGCAGAAGCTCTA CATTGACGGTCGTCAACAATGTGATGTGTTTCTACATGTGAACGAAAATG TAGGATCCGACGCTCCGTGCGGGGACCGGTGCACATCAAGCAAGTGAGGT GGGAATTTGTATTTGTTGTGCTGCACTTAGGATGGATTCCGCTCCCCGAG AAGCTTTGCTAGCTCAAACCCAGAAATCACATGCGCTGCTGCTTTCCTGC TGCTTGGAATGTATTTATCGTCAGAATCGTGGCTGGTGAAGTGCTGGAGA TGGTTGGTGTCGATGTTGGACTCGTGGTAAGGCTTGCCGATGGGCTGCTC TACCAGCGATTCGTCGATAATTCTGGCAAAGACGACACGAATGTGAGTAC TAACGTTGACCAGACCAATTCTTTCATCATGACACGTAAATACAGAGTGG CAACAACAGCGGTCGGCAATCACGCTAACATCTAGTTGATTACGGTTTCA TAGGTGGATACGAAATCGGGTGTTTTTCAATTTTGGCCGTGCGTTGTGTG CTAAGCGCGTAGCTCAACGCCGACGTATCGATGATTTCCCAATGTGCCCT TTCAACGCGTGAGGTAACGAGATCACGTGTAATATCATTTGAGGAATGCT ACTCATGCTTCTCAAAAACGATGCGACGAAGCCGAGATTCACATTGCGTA TCGTTTGCACGTATTTGAAGGCGTGAGTTTCCTTCTCCTCTATATCTTAG ACCGGCAAGGTCCAAGCTGCGTACCCAGCTGCTATCTAATGAAGATGCTC CTTTTAATCTTTGGGTGGCGAAGCTCGGTCTTTGTTTTTGCTTCTAGTTG AACACCAATTATTCATGCTAATTTGCTTGCGCCCACCGCAGTTCGTGTAC GACTTCGCCAGATCGAGTGACGCTCCTACGGGCAACACAATGGCAGACCG GATGGACCCTGGGTGGGTCAACGTCCCTGACCAGCTGCAAATTGTTGGGG TGTCCTCGCCGGGAGCCAAATATACCCTGCGCAGCCTCATCGGAGCGCTC AAATCCCGCTTTCTGCAATCCCAGACGGTTCTCTACCCTTTGGTGGAAAA GATCAAGGCCTTCTCTTTTGTGCATTCCTTCTACCTCGACTACCTGAGGG TGAGGAAAAAGATCGTGACACGGCTGGACTTGGTTCGTCGAACGAACAGC ACGGTTTTGGGCTTGTCGATTAGTTTACCTCATTGCCGGAATACGATATC CTCTCCTTCCCTCCATGTCGTGTACGTATGTGCTATATACACGACGACTT GAACGATGCATGAGGCGACTGAACACTTTTCGTTATGAAGCGATCACTTT TGATTTGGACAACCACCAGTAATATCTCTACTTTCATATATCTGCGTTCT CCGGACTTCTGTGCTGTGTTACCGTGTAGCGCACGATTCGTGACAACCAA ATGGTATACTCCGGAGTACGTTTCAGCCAACTCCGGACACACGGTGAGCC TGTTAGATCTGCACTGTTTGGCGCGTTTCACAAGTTGGGCTCGGCAAGGT TCGAAGGTCTTCGTCCACGGTCGACAACACGTAGAAGGGGGCAACAACCA CCCATCGGGACAGATGTGGCGGCGAGAAGAGTGCTGCCGCGCGTTGCGGT CTGATGCGTTCAGCGGCTATGTGTGGTATAAACCGGCGCGATGCGGTGCA GAACGGCCTCGCACTGCTGTACACTTCACAGGAGGCCGATTTCGAATTTA CTCTCGGAATACACTCAAACCCTGCGTCTTGCACCATTGTATACCGGTTA TCTTACGGCAGACCGTGTCTGAGGAGCTTGCCGGCGCAGCTCCAACCAGC GACGTAGCTCTTGAGACGGGCACGACACATATCACGCATCTCAATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig769:64265..67610-

>mRNA_P-littoralis_Contig769.37.2 ID=mRNA_P-littoralis_Contig769.37.2|Name=mRNA_P-littoralis_Contig769.37.2|organism=Pylaiella littoralis U1_48|type=CDS|length=924bp|location=Sequence derived from alignment at P-littoralis_Contig769:64265..67610- (Pylaiella littoralis U1_48)
GGGGACACCTACCTCGCCGTCGGTACGGCCGTGTGGAGGAAGGATGAAGG
CAACGCCGACGACGAGGCCCTAATCGAGGTAGCATCCGATTGGACTGCCG
TTCATCAGCCGGGATGGCAAAAGATGGGAGATACTGTCTTGCCTGCCGAC
GTGGTCGACATCGCCGTCTACGGGGAAATCATGGGGTACGATCTGACGGA
TCCCGCGTCGACTGGAAATGCCAAAGTCGAAATTCGAGTCGTACTGCTGG
ACGCGGGCGGTAAACTGCACCTCGTCCAGGGTGGTAACGGGCCTTTAACA
AACTTCGAGTCAACGCCCTTGGAGTTTGATGATGGAGGATCGTCGCAGGC
CCCGACGTGGGAATTGATTGCCTTCAGCGGCGGAACCATGTACGGGTACG
AGGGGGGCGTCGTGTGGATCCTCGAGATCGATCTCGTCACCGGCACGTAC
ACCGCGAACACTCGAATCGTGGCTGGTGAAGTGCTGGAGATGGTTGGTGT
CGATGTTGGACTCGTGGTAAGGCTTGCCGATGGGCTGCTCTACCAGCGAT
TCGTCGATAATTCTGGCAAAGACGACACGAATTTCGTGTACGACTTCGCC
AGATCGAGTGACGCTCCTACGGGCAACACAATGGCAGACCGGATGGACCC
TGGGTGGGTCAACGTCCCTGACCAGCTGCAAATTGTTGGGGTGTCCTCGC
CGGGAGCCAAATATACCCTGCGCAGCCTCATCGGAGCGCTCAAATCCCGC
TTTCTGCAATCCCAGACGGTTCTCTACCCTTTGGTGGAAAAGATCAAGGC
CTTCTCTTTTGTGCATTCCTTCTACCTCGACTACCTGAGGACCGTGTCTG
AGGAGCTTGCCGGCGCAGCTCCAACCAGCGACGTAGCTCTTGAGACGGGC
ACGACACATATCACGCATCTCAAT
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