mRNA_P-littoralis_Contig767.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 358 bits (918), Expect = 7.910e-118 Identity = 176/298 (59.06%), Postives = 224/298 (75.17%), Query Frame = 3
Query: 261 DRVRQTGMDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQECFSILPLAPAHSDHGAAPVGRPSGFVDWEVQL 1154
DRV GMD+LHQ +L+ KK + VL+ L AG+ +VR R A RR+LPPN+SPM DIT+ GW+ALTGQ+LW++SSIFPF+VAPIF+ L V+ V++EVA RI V+ T GK VC AF+ L+KA SW+SF+VR+PSFT GLR LQK+Q DQV+Q VMGV G +HKGLHI+ N+ V+GVVTNCNVGEAK+K+ KASAPS+ R+N EH+W TNDSLA++ALADGV W+ASGW GR+W + V AG LC+ TLQ+ F++LPLAPA SD +A GRP G+V+WE L
Sbjct: 114 DRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSA--GRPWGYVEWEQNL 409
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 355 bits (910), Expect = 4.780e-115 Identity = 176/298 (59.06%), Postives = 221/298 (74.16%), Query Frame = 3
Query: 261 DRVRQTGMDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQECFSILPLAPAHSDHGAAPVGRPSGFVDWEVQL 1154
DRV GMDILHQ +L+ KK V++ L AG+ +VR R A R+LPPN+SPM DIT+ GWSALTGQ+LW++SS FPF++APIF+ L V+ V++EVA RI VDP T GK VC AF+ LVKA SW+ F+VR+PSFT GLR LQK+Q +QV+Q VMGV G +HKGLHI+ N+ V+GVVTNCNVGEAK+KE+KASAPS+ R+N HIWRATNDSLA+KALAD + W+ASGW G +W R+ V AG LC+ TLQ+ FS+L LAPA SD +A GRP G+V+W+ L
Sbjct: 125 DRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADAIEWTASGWTGSKWERRTVTAGDLCRQTLQDLFSVLLLAPALSDTLSA--GRPWGYVEWDEDL 420
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 286 bits (731), Expect = 3.490e-88 Identity = 155/295 (52.54%), Postives = 197/295 (66.78%), Query Frame = 3
Query: 261 DRVRQTGMDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQECFSILPLAPAHSDHGAAPVGRPSGFVDWE 1145
DRV GMDILHQ +L+ KK V++ L AG+ +V DIT+ G SALTGQ+LW++SSI PF++APIF+ L V+ V++EVA RI V+P T GK VC AF+ LVKA SW+ F+VR+PSFT GL VLQK+Q++QV+Q V+GV G +HKGLHI+ N+ V+GVVTNCNVGEAK+KE+KASAPS+ R+N HIWRATNDSLA+KALADG+ W+ASG LC+ TL+E FS+LPLAPA SD +A GRP DW+
Sbjct: 63 DRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADGIEWTASG--------------DLCRQTLREVFSVLPLAPALSDTPSA--GRPWDRADWQ 324
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 274 bits (701), Expect = 6.140e-87 Identity = 139/240 (57.92%), Postives = 178/240 (74.17%), Query Frame = 3
Query: 288 ILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVE--QFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGR 1001
+L Q +L+ KK + VL+ L A + +VR R A RR+LP N+ PM DIT+ GW+ALTGQ+LW++SSIFPF+VAPIF+ L V+ V++EVA RI V+ T GK VC AF+ L+KA SW+SF+VR+PSFT GL LQK+Q DQV+ Q VMGV G +HKGLHI+ N+ V+GVVTNCNVGEAK+K+ KASAPS+ R+N EH+WR TNDSLA++ALADGV W+ASGW GR
Sbjct: 4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQALADGVEWTASGWTGR 243
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE) HSP 1 Score: 283 bits (724), Expect = 8.260e-87 Identity = 151/291 (51.89%), Postives = 194/291 (66.67%), Query Frame = 3
Query: 282 MDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQECFSILPLAPAHSDHGAAPVGRPSGFVDWEVQL 1154
M +L Q +L+ KK V++ L AG+ +VR R G SALT Q+LW++ SIFPF++APIF+ L V+ V EVA RI V+P T GK VC AF+ LVKA SW+ F+VR+PSFT GL VLQ +Q++QV+Q V+ V G +HKGL I+ N+ V+GVVTNCNVGEAK+KE+KASAPS+ RNN HIWRATNDSLA+K+LADG+ W+ASGW G +W R+ V AG LC+ TLQ+ FS+LPLAPA SD +A GR G V+W+ L
Sbjct: 1 MLLLTQSALNSGKKIMGFVMDALDPAGSEIVRARAG-------------------GGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPVTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIARNLVVNGVVTNCNVGEAKNKELKASAPSASGRNNARHIWRATNDSLAIKSLADGIEWTASGWTGSKWERRTVTAGDLCRQTLQDVFSVLPLAPALSDTLSA--GRSWGNVEWDEDL 270
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.520e-77 Identity = 130/259 (50.19%), Postives = 172/259 (66.41%), Query Frame = 3
Query: 282 MDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQE 1058
M +L Q +L+ DKK +++ AG+ +VR R A RR+LPPN+SP+ DIT+ IFPF++APIF+ L V+ V++EVA RI V+PDT GK VC F+ LVKA SW+ F VR+ S T G VLQ++Q++QV+Q V+GV G +HKGLHI+ N+ V+G VTNCNV EAK+KE+KASAPS+ R+N HIWRATNDS A+KALADG+ W+ SGW G +W R V AG C+ TLQ+
Sbjct: 1 MLLLTQSALNSDKKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADITH-----------------IFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPDTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASGRDNARHIWRATNDSFAIKALADGIEWTTSGWTGSKWERGTVTAGDPCRQTLQD 242
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 210 bits (534), Expect = 2.260e-59 Identity = 105/185 (56.76%), Postives = 135/185 (72.97%), Query Frame = 3
Query: 261 DRVRQTGMDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIVHKGLHISENI 815
DRV GMD+LHQ +L+ KK + VL+ L AG+ +VR R A RR+LPPN+SPM DIT+ GW+ALTGQ+LW++SSIFPF+VAPIF+ L V+ V++EVA RI V+ T GK VC AF+ L+KA SW+SF+VR+PSFT GLR LQK+Q DQV+Q VMGV G +HKGLHI+ N+
Sbjct: 219 DRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNV 403
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 150 bits (380), Expect = 2.830e-36 Identity = 99/330 (30.00%), Postives = 169/330 (51.21%), Query Frame = 3
Query: 183 QRNALRCRKT*ALWSLSTPPPRRRCVDRVRQTGMDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLP-PNISPMGDITNQAGWSALTGQELWVLSSIFPFVVAPIFTDHLTLVANVKGAVISEVALRIGVDPDTAEGKTQVCKAFRSLVKAVSWTSFLVRAPSFTRRGLRVLQKAQRDQVEQFALVMGVVTGIV---HKGLHISENIAVHGVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDG--RRWVRQLVEAGPLCQSTLQECFSILPLAPAHSDHGAAPVGRPSGFVDWEVQL 1154
QR AL + + P + ++ VR G+D+ HQD+ + K +L GL A + LA L P+ D + G+SAL+G ++W LSS+ V P+ ++ +++ +G DT T+V + R+L+ A S + L+R+ SF + + + QR++V +++ G + H+GLH ++N +G +++C+ GE++HK K+ A ++ R+N EHI R ND++A +A+A+GV W+A G+D R WV++ V+A P C+ L+ +I HG GRP G V+W V+L
Sbjct: 547 QRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLMSMLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAMAEGVRWTAWGYDKTKRGWVKKTVQASPACRELLR---TISEWEIGARRHGT---GRPRGIVEWNVRL 870
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: A0A6H5JYK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 5.090e-23 Identity = 57/114 (50.00%), Postives = 69/114 (60.53%), Query Frame = 3
Query: 825 GVVTNCNVGEAKHKEIKASAPSSGERNNPEHIWRATNDSLALKALADGVSWSASGWDGRRWVRQLVEAGPLCQSTLQECFSILPL----APAHSDHGAAPVGRPSGFVDWEVQL 1154
G V N N GE+KHKE+K SA S+ R+NP HI+R ND+ ALKAL DGV WSA G G V + + AGPLC+ LQE F ILPL A + D GRP G+ W+ L
Sbjct: 31 GAVGNANFGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSAKGRVGGVEVTKELTAGPLCREVLQEVFKILPLQTTPAASEDDTTGRRGGRPHGYQQWDAGL 144
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 4.800e-17 Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 2
Query: 2 SPMHSAWTH*KFSNAKTERLCQACKVGRDDPGNPRFDVQKHAQTSDGLKHDLQRVAAAGTAAERTALSKDLGVVVPVYSTPSTKV 256
SPMHS W + K NAKT CQAC V R D GNP++D+ K+A+T+DGLK DL RVAA +R LS+ LGVVVP Y P +V
Sbjct: 35 SPMHSLWANQKHHNAKT--TCQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEV 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig767.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig767.8.1 >prot_P-littoralis_Contig767.8.1 ID=prot_P-littoralis_Contig767.8.1|Name=mRNA_P-littoralis_Contig767.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=291bp MDILHQDSLHVDKKGRSCVLEGLLDAGATVVRVRLAMRRVLPPNISPMGDback to top mRNA from alignment at P-littoralis_Contig767:36455..46542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig767.8.1 ID=mRNA_P-littoralis_Contig767.8.1|Name=mRNA_P-littoralis_Contig767.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10088bp|location=Sequence derived from alignment at P-littoralis_Contig767:36455..46542+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig767:36455..46542+ >mRNA_P-littoralis_Contig767.8.1 ID=mRNA_P-littoralis_Contig767.8.1|Name=mRNA_P-littoralis_Contig767.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=873bp|location=Sequence derived from alignment at P-littoralis_Contig767:36455..46542+ (Pylaiella littoralis U1_48)back to top |