prot_P-littoralis_Contig766.25.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig766.25.1
Unique Nameprot_P-littoralis_Contig766.25.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length853
Homology
BLAST of mRNA_P-littoralis_Contig766.25.1 vs. uniprot
Match: D8LDJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.060e-49
Identity = 184/487 (37.78%), Postives = 223/487 (45.79%), Query Frame = 0
Query:   99 WAAQTVGMHVPTAQELPYHHSSEPSGESVYVSVDAASVKTIGGTLPEILEDSAWCIGEEDCVAPXXXXXXXXXXXXXXXXX----------------------------------------------SIESAEDENP---DGTATTTTV-EVPDKHLHNLNHDKDAL--GEAATSTAGPDPYSKPKSS--ENYIPTAATXXXXXXXXXXXXXXPTQHERRGPLAKGHGYNINTDANTNTNIK----TTAAHGGTVDADQGGPTTLGATAADGEDTLQNFEAGAGAXXXXXXXXXXXXXXXXXXAGEIGXXXXXXXXXXXXXEEDGEEEVVESVV--GKARPPWRVFVYVLLLCAGLFGTYLRGTLLRWRSLLFRKDSREGWARDLDLAIASARSRAESFCSGRSSMFSAGDPVDDSELPDLVSGDED-ESGGGDXXXXXXXD-GEVPLMWDTRPKPDDRLIFHPVLGVVPAGAVRAWGGDGRGGWSG 523
            W  Q  G+  P  +  P  H S+ S ++        +VKTIGGT+P+IL+DS+WC G EDCV P                                                               +  S+  E P   DG  TTT    + D         +  L  G A  +TA   P S+P S+  ++ +PT A               P Q E+RGPL KG G N NT       +K    T   HG      + G T  GA A +      N  A  G                 XX     XXXXXXXXX           V+E+ +  GKA P WR F  +LLL A + GT+LRG++  W    F  D R+ WA DLD AIA ARSRA SFCSGR+S+FS GDPVDDS+LPDL+S  E+ E G GD       D GE PLMWD RPKPDD L+FHPVLGVVPAG VRAWGGDG GGW G
Sbjct:  124 WDGQAWGVPAPALE--PSCHLSDRSSDAY-----PGAVKTIGGTVPDILQDSSWCAGGEDCVLPPATGAGNKKEAVRGGGVGGSQEGTGSCIDAAXXXXXXXXXXEAAACRGESSIPGDAGRVPDDEARASSSGEGPPRRDGRFTTTAAASLADFTTAGPKEQQSRLVDGYATIATAAY-PQSRPPSTTEQSSLPTEARPTVATER-------PPQQEQRGPLVKGQGANTNTRDRDTGGVKHPGATAVVHGD----GRTGATDEGARAEEPTPGRWNRHAKVGPTGGSKGKGRRERELPAXXXXXXXXXXXXXXXXG----------VLETAIVGGKAWPSWRAFACILLLSALVLGTFLRGSIPHWLPF-FGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFS-GDPVDDSDLPDLISDSEEGEDGNGDQGVVPGDDDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGG 579          
BLAST of mRNA_P-littoralis_Contig766.25.1 vs. uniprot
Match: A0A6H5LRF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 6.090e-45
Identity = 172/452 (38.05%), Postives = 200/452 (44.25%), Query Frame = 0
Query:  136 VKTIGGTLPEILEDSAWCIGEEDCVAPXXXXXXXXXXXXXXXXX--------------------------------SIESAEDENPD----------------GTATTT--------TVEVPDKHLHNLNHDKDALGEAATSTAGPDPYSKPKSSENYIPTAATXXXXXXXXXXXXXXPTQHERRGPLAKGHGYNINTDANTNTNIK----TTAAHGGTVDADQGGPTTLGATAADGEDTLQNFEAGAGAXXXXXXXXXXXXXXXXXXAGEIGXXXXXXXXXXXXXEEDGEEEVVES--VVGKARPPWRVFVYVLLLCAGLFGTYLRGTLLRWRSLLFRKDSREGWARDLDLAIASARSRAESFCSGRSSMFSAGDPVDDSELPDLVSGDEDESGGGDXXXXXXXD--GEVPLMWDTRPKPDDRLIFHPVLGVVPAGAVRAWGGDGRGGWSG 523
            VKTIGGT+P IL+DS+WC G+EDCV P      XXXXXXXXXXX                                SI       PD                G  TTT        T   P +    L      +  AA   + P   ++  S     PT A               P Q E+RGPL KG G NINT       +K    T   HG      + G +  GA A +      N  A  G                     EI                 GE   +E+  V GK+ P WR F  +LLL A    T+LRG++  W    F    R+ WA+DLD AIA ARSRA SFCSGR+S+FS GDPVDDS+LP L+S  E+   G D       D  GE PLMWD RPKPDD LIFHPVLGVVPAG VRAWGGDG GGW G
Sbjct:  153 VKTIGGTVPGILQDSSWCAGDEDCVVPPATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAACLGEPSISGDAGRVPDVEARALSGGEGPPRRDGRFTTTAAASLADFTTTEPKEQQSRLVDGYATIATAAYPQSRPPTTTEQSSLPAARPTVAAER------------PPQQEQRGPLVKGQGANINTRDRDTGGVKHPGATAVVHG----ERRTGASDEGARAEEPTPGRWNRNANVGPTGGSKEQGRR----------EIELSAGTGGRGRRSENRGGEGGGLETGIVGGKSWPSWRTFACILLLSALGLSTFLRGSMPHWLPF-FGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFS-GDPVDDSDLPGLISDSEEGEDGNDTQGVVPGDDDGEAPLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGWGG 576          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig766.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ6_ECTSI1.060e-4937.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LRF5_9PHAE6.090e-4538.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..576
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 673..699
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..783
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..852
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..602

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig766contigP-littoralis_Contig766:75294..78901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig766.25.1mRNA_P-littoralis_Contig766.25.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig766 75055..80341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig766.25.1 ID=prot_P-littoralis_Contig766.25.1|Name=mRNA_P-littoralis_Contig766.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=853bp
MQRGHLGDGEGHDRDANKVAAATAAAATSTAAAAGSTTHTLRPATATTGS
GEQASHRGSDPSAREVGGSGGDDGGCNASERRCSKDGGDGRGGSDKDRWA
AQTVGMHVPTAQELPYHHSSEPSGESVYVSVDAASVKTIGGTLPEILEDS
AWCIGEEDCVAPPPAARADDSNVEKGGGGSIESAEDENPDGTATTTTVEV
PDKHLHNLNHDKDALGEAATSTAGPDPYSKPKSSENYIPTAATTPPVVGG
SPEQQQQPTQHERRGPLAKGHGYNINTDANTNTNIKTTAAHGGTVDADQG
GPTTLGATAADGEDTLQNFEAGAGAGARGANRGRRRDVSADDDAGEIGGG
GDGRGLSVELEEEDGEEEVVESVVGKARPPWRVFVYVLLLCAGLFGTYLR
GTLLRWRSLLFRKDSREGWARDLDLAIASARSRAESFCSGRSSMFSAGDP
VDDSELPDLVSGDEDESGGGDGSGGDGGDGEVPLMWDTRPKPDDRLIFHP
VLGVVPAGAVRAWGGDGRGGWSGGTGWGKKSGRVVESAAAAAAAAAATAG
AAVNGGMTGASGETCRSSSPPSRCALAERTSTGIEAKVRGGKGEGKPTPP
ARNMDERFGLVAACEEKATGEAVAVAGRSEREAVKGGGGGGAAAVAVAAV
AEVPINEAVPMVVPSERAKTARTQGAAEAAAAAESSGVEDNGSETNRMCE
NGRCKPTTATITTTEAAAGAAAAVGVGKTTAVYSQQQPSNSNSNSNSNSN
SSQTPAALTLQFELGSSSSRSSSSSSSNDGGDAAGRSTDRGVGLQVGGSV
NFGSSGGGGGGGGSCCSSSDGGSGRDVRVDEFSPARLSSEQPRPIAAAFH
VS*
back to top