mRNA_P-littoralis_Contig765.1.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A6H5JTQ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTQ7_9PHAE) HSP 1 Score: 948 bits (2451), Expect = 0.000e+0 Identity = 563/932 (60.41%), Postives = 603/932 (64.70%), Query Frame = 1
Query: 151 MGKLISDAAKKNGSTPIRLKFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGA----GNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDAS----SAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXX------RVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQVRGHQRGLAGRCEGFPHLLFCRGRLGEGKRGYLKPKYHLIPSSSFLLFVQGGRAERGEFDWRFSRACVYEYAVTPPLAHPPGLSRINTLSPRSSVHPLLLCGACTHRLDNSSAKILVFSLLCIIPPFSLSLPFSLSLFSIYTLSLGAQIVSSSEANEFLLPRHKNETKRNEXXXXXTKKRTLLSYVPQRLAFSRLLTNTPSTVFLDEATSALDEQNEAKLYAWLKAEALDAFISVGHRASLFRYHTHVLRGTSDGQWFFHTMEEFLDKHYSPALLG 2904
MGKLI+DAA+KNG TPIRLKFW VLRPFFTVNE RKTAW WLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQ+GFYRGTRRYVVILLAAAPLFALS+FVQGKLGLDWRRWLTEHLCGLYF NR+FYALKIGY+SS KT + G + GIDNPVS VDNPDQRIGEDI+TFTKNCIDVVVVFVG+VLKVGSFVGVL+SISPRLTAFVV YSV GTLSTTALFGARLK LIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEK VKGLLEKVV N HLRL CDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFL+VCME M +S +A SLS L+DGY+AVP SD D V V RD V V G XXXXXXXX R+TTVV G A +G++ V+LKI+ LTLFTPDRKQ ICR+LSF+V RGQSVLIFGPSGCGKSSLLRGISGLW+AG G +SRHSDD+TMFIPQKPYLPLGSLRAQMLYP SEDE M PAS+EG+LEQVQLGYLCSR+GGL A+RDWQDELSLGEQQ RLAFSRLLTNTPSTVFLDEATSALDE+NEAK+Y+WL+ ALDAF+SVGHRASLFRYHTHVLRG SDG+WFFHTM++FLD HYSPA+LG
Sbjct: 1 MGKLIADAAQKNGRTPIRLKFWKVLRPFFTVNEDRKTAWGWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQDGFYRGTRRYVVILLAAAPLFALSKFVQGKLGLDWRRWLTEHLCGLYFQNRSFYALKIGYLSSSKTTASSPGTEGQQQDGAEGNGSAAAIWFGAREEEQQRGGIDNPVSAVDNPDQRIGEDISTFTKNCIDVVVVFVGSVLKVGSFVGVLLSISPRLTAFVVAYSVAGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEVVKGLLEKVVGNTHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLVVCMERMAEENPGGNPPAGSSGTTAAATSLSTLDDGYIAVPSSDG----------GDDKGSGVVVQRDGXXXXXXXXXXXXXXLLDVTEAVEGXXXXXXXXXXXXXXXAAGGRITTVVTGGGSAAGKGQKEVILKIEDLTLFTPDRKQAICRKLSFEVKRGQSVLIFGPSGCGKSSLLRGISGLWSAGRGSISRHSDDETMFIPQKPYLPLGSLRAQMLYPHSEDEVMLTPASMEGILEQVQLGYLCSRSGGLSAVRDWQDELSLGEQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLAFSRLLTNTPSTVFLDEATSALDEENEAKVYSWLRTAALDAFVSVGHRASLFRYHTHVLRGQSDGKWFFHTMKDFLDNHYSPAMLG 734
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A2K1L105_PHYPA (Uncharacterized protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L105_PHYPA) HSP 1 Score: 348 bits (893), Expect = 7.830e-103 Identity = 219/627 (34.93%), Postives = 329/627 (52.47%), Query Frame = 1
Query: 208 KFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYP----RSEDESMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
K W + R +F + + K + LV++L L + +G+ V SY QRDFS+A+S KD GFYR ++V I++ AAPL+A ++Q L L+WR WLTE+L YF NRA++ LK+ DG +DNPDQRI ED+++F +N +D++++ L + F GVL SI+P L ++ YSV GT+ T FG+RL RL F+ +REA+FR+ LVRVR++ E IAFY GE E +K L +V+N + + ++F+N + + ++P +V+A RYF+GE++FGVISQT AF I ALS+IV + +L+ LA++ +RL LL ++ V + L +S+A + + +DND G D +++ + R +G L + +++ TP+ K + +L+FQ+A G+S+L+ GPSGCGKSSLLR I+GLW+ G G + +T F+PQKPY+PLG+LR Q+L+P S SM + L LE+V+L L +R GGLGA++DW D LS GEQQ
Sbjct: 24 KLWRISRMYFYGDRKSKARFL-LVIVLILCAVCAGLFVVMSYVQRDFSSALSGKDIPGFYRAIWKFVGIIVIAAPLYAYYHYMQDLLSLEWRVWLTEYLLSSYFSNRAYFDLKM---------------DGK------------------------------LDNPDQRICEDVSSFVRNTLDIIILISSQFLNIIGFTGVLWSIAPELVYILIGYSVLGTVVTVKGFGSRLMRLKFQALQREADFRYSLVRVRDNVESIAFYGGENHEAATIKKFLASMVANFREIILWNRHFSLFNNVYEYAMIIVPSIVIAPRYFSGEVQFGVISQTGFAFHRILNALSIIVFKFDSLSGLAAQTERLESLLSALDDHSGDVRLMKRHLGKTSSA---------------------IGLNIDND-------------------------------------GDDTPLLNMRPEHISSGYISREVGPG-------LVLKDVSILTPNLKTVLFTDLNFQLAPGESLLVMGPSGCGKSSLLRAIAGLWSRGSGILQSPLRSETFFLPQKPYMPLGTLRDQLLFPVLSSNSNASSMHSDGDLYEALEEVKLQELPARVGGLGAVKDWSDTLSAGEQQ 539
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A1Y1HP97_KLENI (ATP-binding cassette transporter n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP97_KLENI) HSP 1 Score: 343 bits (880), Expect = 3.330e-101 Identity = 220/627 (35.09%), Postives = 321/627 (51.20%), Query Frame = 1
Query: 208 KFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCM--EGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMANPASLEGV--LEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
+F V R FF + + AW LMLAL + +G+ V SYTQRDFSTA+S KDQ F++ R++ IL+ A PLFA+ +VQ L L+WR W+T L YF RAF+ LK+ + +DNPDQRI +D+ F + +VV +L +F GVL S+SP L F++ YS+ GTL +FG ++ L +E R+A+FR+ +VRVRE+AE IAFYRGE+ E V + ++++ + R+ L++F N++ + T V+P +++A RYFAG+IEFGV++Q MAFR I AL+V+V + L+ LA+ +RL L++ + + + HE + + SA D +R++ + VT G + + G G L + +++ TPDR+QT+ L+ + GQS+++ GPSGCGKSSLLR I+GLW AG G +S QT F+PQKPY+PLGSLR Q+L+P+ E + PA E + LE+V LG L + GGLGA+ DW D LS GEQQ
Sbjct: 6 RFLRVGRAFFQ-GDAKWRAWGLTALMLALCGVTTGLFVVLSYTQRDFSTALSQKDQPAFWKAVSRFLGILVVATPLFAVYDYVQDLLALEWREWMTNLLVSNYFARRAFFDLKL---------------------------------------------ENTLDNPDQRICDDVRNFVGGSVGLVVFTTNKILNSIAFTGVLWSVSPELVIFLLAYSIIGTLVALKIFGKKMVHLQYEALARQADFRYSMVRVRENAESIAFYRGEERELHSVSAFVRRMIAVLRHRIVWSRHLSLFGNAYEYATLVIPSVIIAPRYFAGQIEFGVVTQAGMAFRAILSALTVLVAKFLELSELAAGTERLDALILALAKHSGDRRLATHEQVAEEEAGPRNSAEEDDE----------------------------------------------ERALLLRVTEGGP------------SRIAKTEGPG---------LILKDVSISTPDRRQTLFENLNLTLLEGQSLMVTGPSGCGKSSLLRAIAGLWNAGSGEISCPPAAQTFFLPQKPYMPLGSLRQQLLFPKDESHKL-RPADEELITALEEVHLGSLAEKVGGLGAVCDWSDMLSSGEQQ 518
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A2K1JHE7_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHE7_PHYPA) HSP 1 Score: 315 bits (808), Expect = 1.350e-91 Identity = 207/584 (35.45%), Postives = 308/584 (52.74%), Query Frame = 1
Query: 328 SYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDE-SMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
SY QRDFSTA+S+KD FYR RR+V+I++ AAPL + +++Q L L+WR W++E+L YF NRA++ LK+ DG VDNPDQRI ED+ +F KN ++++ +F G L V F GVL +I+P L F+V+Y+ FGTL T FG RL L F+ +REA FR+ LVRVR++ E IAFY GE E K L +V N+ + + L++F+N + + ++P ++VA RYF+G+++FGVISQT AF I ALSVIV + +++ LA + +RL LL +E V + +SA SL G A D+ D+++ + ++G V T ++R +G L + +++ P+ + + +L+ Q++ G+S+L+ GPSGCGKSSLLR ++GLW+ G G + T F+PQKPY+PLGSLR Q+L+P + + S ++ + L L++V L L +R GGL A+ DW D LS GEQQ
Sbjct: 2 SYVQRDFSTALSSKDVAEFYRAIRRFVMIVIFAAPLDSFYQYMQELLSLEWRAWMSEYLLSSYFSNRAYFDLKM---------------DGK------------------------------VDNPDQRICEDVYSFVKNSVEIIALFSGKFLSVIGFAGVLWTIAPELVYFLVVYATFGTLVTVKGFGGRLTSLKFKALQREAEFRYSLVRVRDNVESIAFYGGESHEAATTKDFLVSMVENVRELIVWNRHLSLFNNIYEFSMIIVPSIIVAPRYFSGQVQFGVISQTGYAFHKILAALSVIVFKFDSISGLAVQTERLEALLSALETHTGDVRVMKRYFGRTSA-SL-----GLAA----DEDREDISL------------------------------------LNISGP-------------VPTGNIKREVGPG-------LIMRDVSIIPPNSQCVLYHDLNLQLSFGESLLVMGPSGCGKSSLLRAVAGLWSRGTGSIQSPLSSDTFFLPQKPYMPLGSLRDQLLFPSNANVCSYSSDSDLHEALKEVALDGLPARFGGLDAVHDWSDTLSSGEQQ 474
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A2R6WQG5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WQG5_MARPO) HSP 1 Score: 318 bits (814), Expect = 1.420e-91 Identity = 217/623 (34.83%), Postives = 322/623 (51.69%), Query Frame = 1
Query: 208 KFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
K W V +F ++RK A + L ++L L + +G+ V FSY QRDFSTA+S K+ EGF+R R++ I++ A PLFA ++Q L L+WR WL++ L YF NRA++ LK+ GK +DNPDQRI ED A+F +N ++++ + L + +F GVL SI+P L F++ YSV GT T LFG +L +L F+G +REA+FR+ LVR+R++AE IAFY GE E +KG +++N + L +FSN++ + V+P +++A RYFAGE+EFGVI+QT AF I ALS+IV + + LA++ +RL L+ + + T +K + S +S S L D + S GD +++ ++ G+ +RD G G L + L++ TP+ K I ++L+ +A G+++L+ GPSGCGKSSLLR I+GLW G G + +++F+PQKPYLPLG LR Q+L+P + S L VL+ V L L + GGL + DW LS GEQQ
Sbjct: 32 KMWRVGIMYFK-GDKRKKACTLLAVVLTLCAICAGMFVIFSYIQRDFSTAISEKNVEGFHRAVMRFIGIVIIATPLFATYHYLQDLLALEWRIWLSDLLLSNYFSNRAYFDLKM----EGK-----------------------------------------LDNPDQRICEDAASFVRNSVEIIALIGSKFLNICAFTGVLWSIAPELVYFLLGYSVIGTYVTVRLFGKKLMQLQFQGLQREADFRYSLVRIRDNAESIAFYSGETHEAKTIKGFFSALIANSRDLILWRRHLGLFSNAYEFSMLVVPSIIIAPRYFAGEVEFGVIAQTGFAFNRILQALSLIVMRFDNFSGLAAQTERLDSLITSLG--KHTGDKQLLQ-QTSRKSSPSQLKD----MEEEQASEGDFLLDV----PENGYSSGKFLRD-------------------------------------------EGPG---------LLMKDLSVTTPNMKNMIIKDLNVSLAPGETLLVMGPSGCGKSSLLRAIAGLWNRGSGLLQAPPLSESLFLPQKPYLPLGPLREQLLFPGKKG-SHHTEIDLFNVLQSVALSDLPGKVGGLDTVCDWGGILSAGEQQ 544
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A7R9Y7G0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y7G0_MICPS) HSP 1 Score: 317 bits (811), Expect = 1.720e-90 Identity = 214/619 (34.57%), Postives = 298/619 (48.14%), Query Frame = 1
Query: 283 MLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRS------------------EDESMANPASLEGVLEQVQLGYLCSR---TGGLGAIRDWQDELSLGEQQ 2076
ML + + ++V FSY QRD TA+SNKD+EGFY +Y+ ++ AAPLFA+ ++VQ + L+WR WLT L YFGN A++ LK A G+ +DNPDQRI +D F C V++ FV +L +G+F GVL ISP L F YS+FGT+ TT FGARL L ++ +REA RFGLVR REHAE IA YRG K E + L V + ++ R+ L +F+N++ + T LP L++A RYFAGE+EFGV++Q AFR +Q AL++I+ TL+ LA+E DRL LL + G LS G++ + + G+ + SS G RV V + + ++ + +++ TP + + R L+ + G SVL+ GPSGCGKSSLLR ++G+W +G G V D +F+PQ PY+PLGSLRAQ+L+P D S+ L L+ LG L SR GGL A+ +W D LS GEQQ
Sbjct: 78 MLFMCATTTALMVVFSYVQRDMMTALSNKDKEGFYEAIYKYLGVIAIAAPLFAMYQYVQDLVALEWRLWLTRLLVREYFGNDAYFKLK---------AEGS------------------------------------MDNPDQRICDDTRNFVNACNAVLLAFVQKILSMGAFFGVLYGISPNLLYFCFAYSLFGTIVTTKFFGARLMGLHYQALRREATMRFGLVRAREHAESIALYRGAKREAANARAALASVAAVMYRRVAWIRNLTLFTNAYDFATFCLPSLIIAPRYFAGEVEFGVVTQAGFAFRTVQSALNIIINNFETLSGLAAETDRLEKLLALLSG-------------------LSKQGXXXXXXXXXXXXXGELELSV----------AGQKIASSSSPG---------------------------LINRVERV---------SDDPNELMSLKDVSVRTPITDRLLWRGLTLDLKDGDSVLVVGPSGCGKSSLLRVVAGVWDSGSGDVVAPPRDDALFLPQTPYMPLGSLRAQLLFPAEIGDADATATAAEEVEAIISDASLFTDDDLHAALDVAGLGDLPSRFANEGGLDAVEEWTDVLSAGEQQ 586
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A846FPF4_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FPF4_9CYAN) HSP 1 Score: 310 bits (794), Expect = 3.640e-89 Identity = 210/623 (33.71%), Postives = 314/623 (50.40%), Query Frame = 1
Query: 208 KFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
+FWA+ +P++ +E+R AW L+ LLV +G+ VA + + D +A+S KD + F+R ++ I++ PLFA + +++ KL L WR+WLT + G YF +RA+Y + N D +DNPDQRI EDI +FT+ + ++ + ++L++ +F GVL IS L F+V+Y++ GT TTA+FG L RL FE KREANFRFGLVR+RE+AE IAFYRGE E G VK L N + + + L +FSN + ++T VLP ++VA F+GE E G +++ AF I +L+VIV Q + L S + ++RL+ +E + L + A P ++ + P G T +R R E L + G+TL+TP+ ++T+ ++LSF + Q +LI GPSGCGKSSLLR I+GLW AG+G + R + + +F+PQ+PY+ LG+LR Q+LYP + ++ A L+ +L+QV L L R GG +DW D LSLGEQQ
Sbjct: 11 QFWAIAKPYWFSSEKRG-AWGLLLSSGLLLVAYTGLSVALNTQRGDLISALSAKDVDRFWRIVLIFLAIVIVYVPLFAGNSYLRNKLALYWRKWLTNSILGKYFSDRAYYDITT-------------NSD--------------------------------IDNPDQRIAEDIKSFTQQSLKFSLILISSILQIIAFSGVLWGISKPLVIFLVVYALAGTGVTTAIFGRILVRLNFEQLKREANFRFGLVRIRENAESIAFYRGETQESGKVKDLFIDAFDNFNRLIFWEFNLNLFSNGYEFITFVLPAIIVAPGVFSGEFEVGKVTEAQGAFFRIFFSLNVIVNQFQDLTSFGAGINRLYTFTTALESPD--------------------LRQHFEAQPELNEQPN------------------------------------YTNPQGEP---------------PETETSQRPQLQRT--EKAYLALAGVTLYTPNHQRTLVQDLSFALESEQGLLIVGPSGCGKSSLLRAIAGLWNAGNGTIVRPNLEAMLFLPQRPYMILGTLRNQLLYPNAAEDITAKDEDLQRILQQVNLPDLADRFGGFDVEQDWADLLSLGEQQ 514
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A835YW91_9STRA (ATP-binding cassette transporter, subfamily D, member 8, SmABCD8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW91_9STRA) HSP 1 Score: 301 bits (772), Expect = 1.890e-88 Identity = 185/431 (42.92%), Postives = 239/431 (55.45%), Query Frame = 1
Query: 814 MSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMAN-PASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQVRGHQRGLA 2103
M+ISPRLT FVV YS+ GT+ T +FG RLK L FE AK+EANFRFGLVRVREHAEEIAFY G E + LL +V+S ++ AQL VF SF W+T VLPYLVVA RYF+GE+E+GVISQTAMAFRVIQG LSV+V +++TL+++A++ +RLH LL ++ + T + +V RD DG C L++ L+L TPD IC LSF + RG+S+LI+GPSGCGKSSLLR I+GLW+ G G + R + +F+PQKPY+PLG LR Q+LYP + A++ LE V+LG++ +R+GGLGA+RDW DELS+GEQQ R LA
Sbjct: 1 MAISPRLTIFVVGYSLLGTVLTLGVFGNRLKHLTFESAKKEANFRFGLVRVREHAEEIAFYDGGPREAAQTRELLREVLSITEDTIKATAQLDVFQQSFSWMTVVLPYLVVAHRYFSGEVEYGVISQTAMAFRVIQGGLSVLVREVQTLSTIAAKTERLHSLLAALQVLSVTHPQ----------------------------------------------RVPRD--------DGVC-----------------------------------------------LRVTALSLRTPDGGGLICDSLSFALRRGESLLIYGPSGCGKSSLLRSIAGLWSYGSGAIERPAPRDALFLPQKPYMPLGDLRTQLLYPNEAGGAGGQGDAAIMHALETVRLGHIAARSGGLGAVRDWTDELSVGEQQRLAFARLLA 330
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A7S0IAS1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IAS1_MICPS) HSP 1 Score: 308 bits (788), Expect = 8.730e-87 Identity = 212/651 (32.57%), Postives = 304/651 (46.70%), Query Frame = 1
Query: 208 KFWAVL------RPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMAN-------------------PASLEGVLEQVQLGYLCSR---TGGLGAIRDWQDELSLGEQQ 2076
+FW L + +Q+ A L +ML L L +G++V FSY QRD TA+S+K+Q FY RY++I++ AAPLFAL +VQ + L+WR WLT L YF A++ALK +GT +DNPDQRI ED + ++C +++ +L +G+F GVL SISP L F YS+FGT+ TT LFG++L L F+ +REA+ RFGLVR REHAE IA Y G K E +G L V + + ++ LA+F+N++ + T LP L++A RYFAGE+EFGV++Q MAFR +QGAL++I+ + L+ LA+E +RL + R V D+SG G+E L ++ L +FTP + + R+LS + G ++L+ GPSGCGKSSLLR ++G+W G G ++ + + ++F+PQ PY+PLG+LRAQ+++P S + N A L L+ LG L R GGL A +W D LS GEQQ
Sbjct: 108 EFWPTLLRALKLAKIYYYGDQKVRARVLLSVMLVLCALTTGLMVVFSYVQRDMMTALSDKNQPAFYDAINRYIIIIVIAAPLFALYNYVQNLVELEWRLWLTRLLVKKYFSKHAYFALKA---------------EGT------------------------------MDNPDQRICEDARNYVQSCNGLLLAVAQKLLSMGAFFGVLWSISPTLLVFCFGYSLFGTIVTTRLFGSKLMGLHFQALRREADLRFGLVRAREHAESIALYGGAKREAAAARGFLAIVAAVLLRKIAWSRNLALFTNAYEFATFALPSLIIAPRYFAGEVEFGVVTQAGMAFRTVQGALNIIIGRFEQLSGLAAETERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT----------------------IARSVVDASG-----------------------------------------------GDE---LALEKLAVFTPLSGRELWRDLSLTLQAGDALLVVGPSGCGKSSLLRAVAGVWTTGSGAIAAPAAEDSVFLPQAPYMPLGTLRAQLVFPASVSDEEGNFDEDDEGETLLPRMRGDFDDAELYAALDAAGLGDLPERFKAEGGLDATMEWSDVLSAGEQQ 641
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Match: A0A351L6Z8_9CYAN (ABC transporter ATP-binding protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A351L6Z8_9CYAN) HSP 1 Score: 296 bits (757), Expect = 2.740e-84 Identity = 199/623 (31.94%), Postives = 297/623 (47.67%), Query Frame = 1
Query: 208 KFWAVLRPFFTVNEQRKTAWSWLVLMLALLVLESGVLVAFSYTQRDFSTAMSNKDQEGFYRGTRRYVVILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYISSGKTATGAGNEDGTGXXXXXXXXXXXXXXXXXXXXXGIDNPVSVVDNPDQRIGEDIATFTKNCIDVVVVFVGAVLKVGSFVGVLMSISPRLTAFVVMYSVFGTLSTTALFGARLKRLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKGGVKGLLEKVVSNIHLRLRCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFRVIQGALSVIVTQIRTLASLASEVDRLHFLLVCMEGMESTVEKHETELDASSAASLSALNDGYVAVPPSDQSAGDVTVEMDNDSSDDAVKVGRDVRDSSGDGDGSCDGADRSVPVGVTGAGSDGXXXXXXXXRVTTVVMERGLGAREGEEHVMLKIDGLTLFTPDRKQTICRELSFQVARGQSVLIFGPSGCGKSSLLRGISGLWAAGDGCVSRHSDDQTMFIPQKPYLPLGSLRAQMLYPRSEDESMANPASLEGVLEQVQLGYLCSRTGGLGAIRDWQDELSLGEQQ 2076
+FWA+ +P++ +E+++ A L ++L L + SG+ V SY RDF TA+S KD ++R Y + + P+ R+++ LGL WR+WLT YF NRA+Y + + +DNPDQR+ EDI +FT + + +++ +G+++ + +F G+L SISP L +V Y++ GT + T LFG RL L F+ K+EA+FR+GLV +R++AE IAFYRGE E G VK + N +L + L F+ + ++ +LP LV+A RYFAGE+EFGVISQ + AF ++ A+S++V QI L++ A+ V+RL +E + + T++D + DG +A+ EHV TL TP T+ ++L V G+ + I G SG GKSSLLR I+GLW G G + R D+ +F+PQ+PY+ LGSLR+Q+LYP + E + L VL+QV L L R GG + DW D LSLGEQQ
Sbjct: 11 RFWAIAKPYW-FSEEKRGARGLLAVLLFLSLAVSGLNVIISYVGRDFMTALSKKDAPEYFRLLWIYGSVFVVGTPIVVFYRYIRELLGLYWRQWLTNSFLDRYFQNRAYYEINLR---------------------------------------------DKIDNPDQRVAEDIRSFTTDSLFFLLIILGSIINLFAFTGILWSISPLLAGILVAYAIVGT-TVTVLFGKRLIGLNFQQLKKEADFRYGLVHIRDNAESIAFYRGENQESGEVKRRFFDAIRNYNLLVEWQRNLGFFTQGYDYIIIILPALVIAPRYFAGEVEFGVISQASFAFSMVLNAISIVVDQIYKLSAFAAGVNRLATFSESLEDPTESQKPGATKIDT--------VEDGRLAL-----------------------------------------------------------------------------------EHV-------TLLTPRYDHTLVKDLMAAVKPGEGLAIVGQSGTGKSSLLRAIAGLWNNGTGRIVRPHLDEMLFLPQRPYMLLGSLRSQLLYPNTSQE--VSDEKLYDVLKQVNLANLPERVGGFDVVLDWADILSLGEQQ 486 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig765.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig765.1.2 >prot_P-littoralis_Contig765.1.2 ID=prot_P-littoralis_Contig765.1.2|Name=mRNA_P-littoralis_Contig765.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=920bp MGKLISDAAKKNGSTPIRLKFWAVLRPFFTVNEQRKTAWSWLVLMLALLVback to top mRNA from alignment at P-littoralis_Contig765:3693..14558- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig765.1.2 ID=mRNA_P-littoralis_Contig765.1.2|Name=mRNA_P-littoralis_Contig765.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10866bp|location=Sequence derived from alignment at P-littoralis_Contig765:3693..14558- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig765:3693..14558- >mRNA_P-littoralis_Contig765.1.2 ID=mRNA_P-littoralis_Contig765.1.2|Name=mRNA_P-littoralis_Contig765.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2760bp|location=Sequence derived from alignment at P-littoralis_Contig765:3693..14558- (Pylaiella littoralis U1_48)back to top |