mRNA_P-littoralis_Contig75.79.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: D8LEZ1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ1_ECTSI) HSP 1 Score: 843 bits (2178), Expect = 1.290e-299 Identity = 458/600 (76.33%), Postives = 493/600 (82.17%), Query Frame = 1
Query: 34 KCAAATIIGPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDP--RLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPEGEQGLGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAI-------RRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQPESPS 1806
K AA IIGPKGGAWDVFIGLEVHAQI+LRSKLFSRSQAAAPSE DEPNSRVSLFDASFPGTLPVLNASAV+QAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGG+LPLIFDPAGPT KAGGA + +G DP + IGITRIQLEVDSGKSLH+RKG E SLVDLNRAG+ALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRP G +GLGERVEVKNMNSVRHLMTAAAAEAVRQ ++LE+GEGPIERETRGFDV+KGET HLRRKEGSVDYRFFPEPDLPPL+V EHVEAL+ATLPELPEATMAR +YGLA HLSRLIVCAAGGAS Y+ED+V+G R+ G A RRDP+VAANWLSNNLFGLLKD+LGSG+ DEG LER PAERLGGLLD+LS+GT+S+QTAK VLREMVLED+SS AMEIVEAKDL+Q+TD E+ESLCR IV+DPRHAKQLAS+R GK NLSKFFMGQAFKATRGRVDGK+VE VMKLLQQPE P+
Sbjct: 2 KRAAERIIGPKGGAWDVFIGLEVHAQIRLRSKLFSRSQAAAPSEHDEPNSRVSLFDASFPGTLPVLNASAVDQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGSLPLIFDPAGPTKP--KAGGAAKARSADELQGGSN--------------------------DPGFHVPAIGITRIQLEVDSGKSLHDRKGEGA--------ERSLVDLNRAGTALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPAGTEGLGERVEVKNMNSVRHLMTAAAAEAVRQARQLEMGEGPIERETRGFDVSKGETIHLRRKEGSVDYRFFPEPDLPPLVVTHEHVEALRATLPELPEATMARLSAEYGLAEHLSRLIVCAAGGASDYYEDLVNGTGRERGHAAGEGSGPYRRDPKVAANWLSNNLFGLLKDQLGSGDS--------DEGGLERRLPAERLGGLLDLLSEGTISSQTAKTVLREMVLEDHSSTAMEIVEAKDLRQITDQAEIESLCRGIVQDPRHAKQLASYRSGKANLSKFFMGQAFKATRGRVDGKVVETSVMKLLQQPEPPA 557
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: W4FIX4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIX4_9STRA) HSP 1 Score: 420 bits (1080), Expect = 1.090e-134 Identity = 263/574 (45.82%), Postives = 339/574 (59.06%), Query Frame = 1
Query: 76 WDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPL-IFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPEG--EQGLGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQ 1788
W+V IGLE+HAQI SKLFS S AA+ S PNSRVS FDA+ PGTLP LN S V QAV+ A AL S V+ +SVFERKHYFY DLP GYQITQQR PIA+ G L + D AG T + N R +N+ + I RIQ+E DSGKSLH + + VDLNRAG+ LMEIVFEP++RSAAEAG LR +Q LR +G CDGNMEDGSMRCDLNVSVRP+ E GERVEVKNMNS+RHLM A E RQV+ +E PIE+ETR FD A G T +R KEG+ DYRFFPEPDLPPL++ V+ KA+LPELP+ AR RDYGL+A+ S ++V A YFE+V +G R ++A+NW+ N LF LLK + + R + P+ RLG +LD++ + T+S + AK +++ M ED + ++IVE K +TD + + CR +V +P +AK +A+F+ GK L +F+GQ K ++GRV + V A + +L+
Sbjct: 6 WEVCIGLEIHAQILSASKLFSGSSAASKSAAFLPNSRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAG------------DTVARNTNFSSRKEKNAAQKQLAAADANEWVEKQ-----------VRINRIQIEQDSGKSLHT-------------LDATHVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNSIRHLMRAVEFEMERQVRHIEATGLPIEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISARFVDDAKASLPELPDQMKARLGRDYGLSAYESAILVHTPH-AVAYFEEVATG----------RPHRLASNWVLNELFSLLKAT-------------NTDIRESPVSPS-RLGEMLDLIVEETISGKIAKELIQHMYYEDTTGRPVDIVERNGWKLITDDETLRAYCRNVVTNPNNAKNVAAFQSGKAQLFGYFVGQVMKDSQGRVHPEKVNAILRAMLE 518
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A024UAY1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAY1_9STRA) HSP 1 Score: 418 bits (1075), Expect = 6.240e-134 Identity = 258/572 (45.10%), Postives = 329/572 (57.52%), Query Frame = 1
Query: 76 WDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPEG--EQGLGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLL 1785
W+V +GLE+HAQIQ SKLFS S AA+ + PNSRVS FDA+ PGTLP +N + V QAV+ A AL S V+ +SVFERKHYFY DLP GYQITQQR PIA+ G L + + A + N R +N+ + I RIQ+E DSGKSLH + + VDLNRAG+ LMEIVFEP++RSAAEAG LR +Q LR +G CDGNMEDGSMRCDLNVSVRP+ E GERVEVKNMNS+RHLM A E RQV+ +E PIE+ETR FD A G T +R KEG+ DYRFFPEPDLPPL++ V KA+LPELP+ AR + YGL A+ S ++V +FE V G R ++AANW+ N LF LLK + E RLG +LD++ + T+S + AK +++ M ED ++ ++IVE K +TD + C+AIV +P+HAK +A+F+KGK+ L FF+GQ K T GR + V A + LL
Sbjct: 6 WEVCVGLEIHAQIQSLSKLFSGSSAASKAASFLPNSRVSFFDAAMPGTLPSVNKACVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKHS-----------SNDVAARNTNFSSRKEKNAAQKQLAAATEVEEGIERQ----------VRINRIQIEQDSGKSLHT-------------LDATHVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKSDVEAPFGERVEVKNMNSIRHLMRAVEYEMERQVQHIETTGRPIEKETRTFDAATGMTKRMRSKEGAKDYRFFPEPDLPPLVISPAFVADAKASLPELPDQMKARLVQQYGLTAYESSVLVLTPHAVE-FFEQVAQG----------RPHKLAANWVLNELFSLLK--------------ATNTNIHESPVTPSRLGDMLDLIVNETISGKIAKDLIQHMYYEDTTARPLDIVERHGWKLITDDDALRQYCQAIVSNPKHAKNVAAFQKGKSQLFGFFVGQVMKETEGRAHPEKVNAILRSLL 518
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A485LE09_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE09_9STRA) HSP 1 Score: 405 bits (1041), Expect = 1.930e-128 Identity = 261/596 (43.79%), Postives = 337/596 (56.54%), Query Frame = 1
Query: 40 AAATIIGPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIF---------DPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPEGEQG---LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQ 1791
A A I+ W+V IGLE+HAQIQ SKLFS + AA+ + PNSRVS FDA+ PGTLP +N + V QAV+ A AL S V +SVFERKHYFY DLP GYQITQQR PIA+ G L D +K A A SSA + ++ + I RIQ+E DSGKSLH + + VDLNRAG+ LMEIVFEP++RSAAEAG LR +Q LR +G CDGNMEDGSMRCDLNVSVRP+ + GERVEVKNMNS+R+LM A E RQV+ ++ PIE+ETR FD G T +R KEG+ DYRFFPEPDLPPL++ + VE K +LPELP+A R RDYGL A+ S ++V A YFE V G R ++ ANW+ N+LF LLK + + L PA RLG ++D++ T+S + AK +++ + ED+ +IV+A KQ+TD +E+ C +V +P +AK +A++R GK L FF+GQ K + GRV + V A + LL +
Sbjct: 24 ALAIIMSSLLSKWEVCIGLEIHAQIQSLSKLFSGASAASKAAL-VPNSRVSFFDAALPGTLPAVNRACVAQAVRTAHALQSDVQLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKKVDVNAGADVRNTNFATRKEKNAALKAASSAAATEEWIEKQ----------------------------VRINRIQIEQDSGKSLHT-------------LDATHVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGERVEVKNMNSIRNLMRAVEYEMGRQVEHIQATGTPIEKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVISPDFVEDAKLSLPELPDAMKTRLARDYGLTAYESAVLVHTPH-AVDYFEHVARG----------RPHKLVANWVLNDLFSLLKAT-------------NTDIAQSPLTPA-RLGAVVDMIVAETISGKIAKDLIQHLFYEDDMRSPADIVDANGWKQITDDATIEAYCDGVVANPTNAKNVAAYRGGKAQLFGFFVGQVMKESNGRVHPEKVNAILRALLDE 552
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A1V9YAQ7_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAQ7_9STRA) HSP 1 Score: 404 bits (1039), Expect = 2.250e-128 Identity = 253/582 (43.47%), Postives = 333/582 (57.22%), Query Frame = 1
Query: 76 WDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSC-------IGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRP-----EGEQGLGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLL 1785
W+V IGLE+HAQIQ +KLFS S AA+ PNSRVS FDA+ PGTLPV+N + V+QA++ A AL S V RSVFERKHYFY DLP GYQITQQR PIAT G L A P + A A K D+G+ ++ PR++ + + RIQ+E DSGK++H + + VDLNRAG+ LMEIVFEP++RSAAEAG LR +Q LR +G CDGNMEDGSMRCDLNVSVRP + + GERVEVKNMNS+++LM A E RQV+ + G IE+ETR FD A G T +R KEG+ DYRFFPEPDLPPL++ V+ A+LPELP+ AR C YGL+A+ + ++V G YFE V + + R ++ NW+ N+LF LLK + E ERLG L+D++ + ++S + AK V+ M ED A +IV+ K Q+TD E+ C A++ +P+ + +A++R GKT L FF+GQ KA+ GRV + + LL
Sbjct: 7 WEVCIGLEIHAQIQSVAKLFSGSSAASKGGSLVPNSRVSFFDAALPGTLPVVNTACVQQALRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATNGVLKFQVQEAKPRAQTTFSSRKEKNAALKAQK-DQGMSDTSVHRFM-----------------PRVAADEWVEKQVRVNRIQIEQDSGKNIHS-------------LDATHVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKPTSPDEDVPFGERVEVKNMNSIKNLMKAVEYEMERQVELITTTGGCIEKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVISQSFVDEALASLPELPDKMKARLCAMYGLSAYEASVLVLTPGAVE-YFEAVCAD--------VSRPHKLVTNWVLNDLFALLK--------------ATNTSIAESPVSPERLGQLIDLVVNESISGKMAKDVIELMYYEDARGPA-DIVQEKGWSQITDEAELRRFCEAVLAEPKAQRNVAAYRGGKTQLFGFFIGQVMKASGGRVHPEKTNEIMRSLL 533
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A6G0X9N4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9N4_9STRA) HSP 1 Score: 404 bits (1037), Expect = 2.870e-128 Identity = 249/585 (42.56%), Postives = 335/585 (57.26%), Query Frame = 1
Query: 64 KGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTP------TPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPEGEQG---LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQ 1791
+ W+V IGLE+HAQIQ SKLFS + AA+ PNSRVS FDA+ PGTLP +N + V QA++ A AL S VH +SVFERKHYFY DLP GYQITQQR PIA+ G L A T +K A A +++ + ++ + I RIQ+E DSGKSLH + + VDLNRAG+ LMEIVFEP++RSAAEAG LR +Q LR +G CDGNMEDGSMRCDLNVSVRP+ + G+RVEVKNMNS+RHLM A E RQ++++E PI +ETR FD G T +R KEG+ DYRFFPEPDLPPL++ + VE K +LPELP+A R R YGL+++ S ++V A +FE V A+ R ++ ANW+ N LF LLK + + RLG +LD++ D T+S + AK +++ M E++S ++IV + Q+TD + + C +V +P++AK + +F+ GKT L FF+GQ K ++GRV + V A + +LL +
Sbjct: 4 RAAKWEVCIGLEIHAQIQSLSKLFSGASAASKLSL-LPNSRVSFFDAALPGTLPTVNRACVAQAIRTAHALQSDVHLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKQAQANALKNTNFTSRKEKNAALQAAQASSAAEEWIEKQ----------------------------VRINRIQIEQDSGKSLHT-------------LDATHVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGKRVEVKNMNSIRHLMRAVEYEMERQIEEIERTGAPIAKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVLSPDFVEETKQSLPELPDAMKTRLSRTYGLSSYESSVLVHTPH-AVAFFEQV----------AVGRPHKLVANWVLNELFSLLK--------------ATNMDIAQSPVTPSRLGEMLDLIVDETISGKMAKDLIQVMYYEEDSRSPLDIVTERGWTQITDDQTLRAYCLGVVSNPKNAKNVTAFKNGKTQLFGFFIGQVMKESQGRVHPEKVNAIMRQLLTE 521
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A6G0SMG8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SMG8_9STRA) HSP 1 Score: 416 bits (1069), Expect = 3.000e-128 Identity = 261/597 (43.72%), Postives = 341/597 (57.12%), Query Frame = 1
Query: 58 GPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPE--GEQG----------------LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLE-DNSSMAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQ 1791
GP G W+V IGLEVHAQ+ RSKL S + AAA PN VS FDA+ PGTLPV+N V QA++ LA+ +TVH RS+FERKHYFY DLP GYQ+TQQR P+A+GGAL + + GGA S ++ D S D + ITRIQ+E DSGKS H+ + S ++VDLNRAG+AL+EIV EP++RS EAG +R LQ LR + CDGNME+GSMRCDLNVSVRP GE+ GERVEVKNMNS+R++M AA EA RQ+ +E G + RETR FD GET +R KEG+ DYRFFPEPDLPPL+VP++ ++ + LPELP+A R C Y L + S ++V G A YFE V S R + ++ NW+ N+LFG LK NG G A LGGL+D++ DGT+S + AK VL M E + A++IVE K KQ+ D+ E+ +LCRA++EDP+ K L ++ GKT L FF+GQ K GRV ++ + + ++L++
Sbjct: 353 GPSGKLWEVCIGLEVHAQVLTRSKLMSGA-AAATLASARPNRHVSFFDAALPGTLPVINRECVRQAIRTGLAVDATVHARSLFERKHYFYCDLPLGYQLTQQRAPVASGGALHFELSVSAVV---SEHGGAQSDDEATF---DASKYKSRKEKNEALRKWKTKQATKQQQEDVIPRSVRITRIQIEQDSGKSNHDLEESS-----------TVVDLNRAGTALLEIVMEPDLRSPLEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADIEALHNALTSSTASPFGERVEVKNMNSIRNMMRAAEYEARRQIALIEEEGGEVHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVVPEKLIQEISEGLPELPDALKNRLCAQYDLTPYESSVLVNEPGAAQ-YFETVASQKSRPS--------KMVVNWVLNDLFGHLK-------AINGDIAGSP-------VQATELGGLIDLIQDGTISGKIAKDVLELMFYENEGEKTALQIVEEKGWKQIQDLEEIRALCRAVLEDPKAKKNLDAYWNGKTQLFGFFIGQVMKRCGGRVHPELANSIMQEVLEE 908
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: GATB_PHYIT (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=26 Tax=Phytophthora TaxID=4783 RepID=GATB_PHYIT) HSP 1 Score: 402 bits (1034), Expect = 4.160e-127 Identity = 253/597 (42.38%), Postives = 338/597 (56.62%), Query Frame = 1
Query: 58 GPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPE--GEQG----------------LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMA-MEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQ 1791
GP G W+V IGLEVHAQ+ RSKL S S A+ S PN VS FDA+ PGTLPV+N V QA++ LA+ +TVH RS+FERKHYFY DLP GYQ+TQQR P+A+GGAL F+ + G + A A+K + + D + ITRIQ+E DSGKS H+ + + ++VDLNRAG+AL+EIV EP++RS EAG +R LQ LR + CDGNME+GSMRCDLNVSVRP G + GERVEVKNMNS+R++M AA EA RQ+ +E G + RETR FD GET +R KEG+ DYRFFPEPDLPPL+ ++ ++ + +PELPEA R C Y L ++ S L++ GA+ YFE V + R + +V NW+ N+LFG LK NG A LG L+D++ DGT+S + AK VL M E+ ++IVE K KQ+ D E+ +LCRA+++DP+ K L ++ KGKT L FF+GQ K GRV ++ + + ++L++
Sbjct: 19 GPSGKLWEVCIGLEVHAQVLSRSKLMSGSAASTLSSA-RPNRNVSFFDAALPGTLPVINRECVHQAIRMGLAVDATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGAL--HFELPESAVVSEHGGAHSDEATFDASKYKSRKEKNEALKKWKAKQAKKQQ-------DVISRSVRITRIQIEQDSGKSNHDLED-----------DSTVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGAEADVESLHNALTARTAAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIEEEGGEVHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSEKLIQEISERMPELPEALKERLCAQYDLTSYES-LVLVNEPGAAPYFETVAAQNSRPS--------KVVVNWVLNDLFGHLK-------AVNGD-------IASSPVTATELGALIDLIQDGTISGKIAKDVLELMFYENEPKKTPLQIVEEKGWKQIQDPEEIRALCRAVLDDPKAKKNLDAYWKGKTQLFGFFIGQVMKQCGGRVHPELANSIMQEILEE 571
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A8K1CM91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM91_PYTOL) HSP 1 Score: 400 bits (1029), Expect = 1.910e-126 Identity = 259/591 (43.82%), Postives = 333/591 (56.35%), Query Frame = 1
Query: 67 GGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRP-EGEQG--LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSSMA--------MEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQPESPS 1806
G W+V IGLEVHAQ+ SKL S S AA+ S PN VS FDA+ PGTLP +N V QA++ +LA+G+ VH RS+FERKHYFY DLP GYQ+TQQR PIAT G L PA T A S G + G + +N D + I RIQ+E DSGKS HE + + +LVDLNRAG+ALMEIV EP++RS EAG ++ LQ LR +G CDGNME+GSMRCDLNVSVR +G + GERVEVKNMNS+R++M AA EA RQ++ +E +ERETR FD GET +R KEG+ DYRFFPEPDLPPL+V + +L +LPELP+A AR YGL + S ++V AG A+ +FE V R A ++ NW+ N LF LK + AE LG L+D+L DG +S + AK VL M E+ ++A + IVEAK+ KQ+ D + LC +++EDP+ K + ++R GKT L FF+GQ KA GRV + A + +LL S S
Sbjct: 19 GKLWEVCIGLEVHAQVLSNSKLMS-SAAASTSSTVLPNRHVSFFDAALPGTLPAINRECVHQAIRTSLAVGAQVHPRSIFERKHYFYCDLPLGYQLTQQRAPIATNGMLQFDL-PA----TAVVNESADSAEGDAVFDGSK-YKNRKEKNEALRKWKEQQAKKATTTEDIIPRSVRIARIQIEQDSGKSNHELED-----------DSTLVDLNRAGTALMEIVMEPDLRSPVEAGQVMKQLQHLLRHLGVCDGNMEEGSMRCDLNVSVRQADGAEATPFGERVEVKNMNSIRNMMRAAEYEARRQMELIEATGTQVERETRAFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVVDHNVIGSLSESLPELPDALKARLTTAYGLTPYESSVLVNEAGAAA-FFESVAQKASRPA--------KLVVNWILNELFSHLK--------------ASNTDIPSSPVSAEALGELIDLLVDGVISGKIAKDVLEIMYYENLQALADGRPMTSVLAIVEAKNWKQIQDETAIRELCLSVLEDPKAKKNVEAYRNGKTQLFGFFIGQVMKACDGRVHPERANAIMQELLDDKSSSS 568
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Match: A0A3F2RH49_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH49_9STRA) HSP 1 Score: 400 bits (1027), Expect = 4.680e-126 Identity = 249/597 (41.71%), Postives = 335/597 (56.11%), Query Frame = 1
Query: 58 GPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEPNSRVSLFDASFPGTLPVLNASAVEQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGALPLIFDPAGPTPTPKKAGGATSTAGSSANKGDRGVQNSXXXXXXXXXXXXXXXXXXXXXLDPRLSCIGITRIQLEVDSGKSLHERKGSXXXXXXXXXXEISLVDLNRAGSALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPE--GEQG----------------LGERVEVKNMNSVRHLMTAAAAEAVRQVKKLELGEGPIERETRGFDVAKGETTHLRRKEGSVDYRFFPEPDLPPLLVPDEHVEALKATLPELPEATMARFCRDYGLAAHLSRLIVCAAGGASGYFEDVVSGGDRQAGKAIRRDPQVAANWLSNNLFGLLKDRLGSGEEQNGQGGGDDEGRLERLFPAERLGGLLDVLSDGTVSNQTAKAVLREMVLEDNSS-MAMEIVEAKDLKQMTDVLEVESLCRAIVEDPRHAKQLASFRKGKTNLSKFFMGQAFKATRGRVDGKIVEACVMKLLQQ 1791
G G W+V IGLE+HAQ+ RSKL S S ++ S +PN VS FDA+ PGTLPV+N V QA++ LA+ +TV+ RS+FERKHYFY DLP GYQ+TQQR P+A+GGAL + A G T ++ R +N D + ITRIQ+E DSGKS+H+ + + ++VDLNRAG+AL+EIV EP++RS EAG +R LQ LR + CDGNME+GSMRCDLNVSVRP GE GERVEVKNMNS+R++M AA EA RQ+ +E G + RETR FD A GET +R KEG+ DYRFFPEPDLPPL+V ++ ++ + +LPELP A R C Y L + S ++V +G A YFE + + R ++ NW+ N+LFG LK G A LG L+D++ DGT+S + AK VL M E+ + + +EIVE K KQ+ + E+ +LC+A++EDP+ K L ++ KGKT L FF+GQ K GRV ++ + +L +
Sbjct: 17 GSSGQLWEVCIGLEIHAQVLSRSKLMSGSASSTLSSA-KPNRHVSFFDAALPGTLPVINREIVNQAIRTGLAVDATVNPRSMFERKHYFYCDLPLGYQLTQQRAPVASGGALHFELPSSAIISEHAAARGGEETIFDASKYKSRKEKNEALRKWKAKQTAKQEEE------DVIARSVRITRIQIEQDSGKSIHDLED-----------DSTVVDLNRAGTALLEIVMEPDLRSPLEAGQVMRQLQQLLRHLEVCDGNMEEGSMRCDLNVSVRPTNLGEDTDAEALHHALTSANAPPFGERVEVKNMNSIRNMMHAAEYEARRQIALIEEEGGEVHRETRSFDAATGETKRMRSKEGAKDYRFFPEPDLPPLVVTEKLIKQIGESLPELPAALKDRLCSQYDLTPYESSVLVNESGAAQ-YFESIAA--------QTSRSSKMVVNWVLNDLFGHLKATNGD--------------IATSPVEAAELGELIDLIQDGTISGKIAKDVLELMFYENEAKKVPLEIVEEKGWKQIQNPEEIRALCQAVLEDPKAKKNLEAYWKGKTQLFGFFIGQVMKRCGGRVHPELANTIMQDILDE 572 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.79.1 >prot_P-littoralis_Contig75.79.1 ID=prot_P-littoralis_Contig75.79.1|Name=mRNA_P-littoralis_Contig75.79.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp MATKCAAATIIGPKGGAWDVFIGLEVHAQIQLRSKLFSRSQAAAPSEQDEback to top mRNA from alignment at P-littoralis_Contig75:290735..296061+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.79.1 ID=mRNA_P-littoralis_Contig75.79.1|Name=mRNA_P-littoralis_Contig75.79.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5327bp|location=Sequence derived from alignment at P-littoralis_Contig75:290735..296061+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:290735..296061+ >mRNA_P-littoralis_Contig75.79.1 ID=mRNA_P-littoralis_Contig75.79.1|Name=mRNA_P-littoralis_Contig75.79.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig75:290735..296061+ (Pylaiella littoralis U1_48)back to top |