prot_P-littoralis_Contig1189.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1189.6.1
Unique Nameprot_P-littoralis_Contig1189.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length215
Homology
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A2G8S714_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S714_9APHY)

HSP 1 Score: 60.1 bits (144), Expect = 6.100e-7
Identity = 52/198 (26.26%), Postives = 82/198 (41.41%), Query Frame = 0
Query:   27 MCYNCRGIGHFARDCTVKIC-KRCQGRGHDEDKYGSPADLRTNLAVELPDCDSG----SAVGLEPWHV----DSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFETDDPGMLVTKKSTGEQLLMRP-DNDLYVSYGRRVDGEVETA 212
            +CYNCRG+GH AR+C  K   K  Q      D   +PA    N A E      G    SA+   P       DSGAS  +         FR  N  + +   +       G GD+ + + +   + L+ +++  Y P+ A+ L+S+ +    GY    +     + ++S+   +   P  N LY    R V+    TA
Sbjct:  558 ICYNCRGVGHIARNCRQKGGGKEGQWPKPKTDDAANPAKADANAATEKGFLALGNVVTSALAAVPGTYIDVFDSGASVHISPYRECFVKFRELNPARAITAANGEQFFATGEGDVEIRVPNGPSTQLLTLRDVLYSPSVAFALVSIKRVDEGGYTTIFEHGECHIVERSSELDIARIPLTNGLYQIVSRYVEVPSATA 755          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: T1J0W8_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J0W8_STRMM)

HSP 1 Score: 59.7 bits (143), Expect = 7.610e-7
Identity = 43/160 (26.88%), Postives = 68/160 (42.50%), Query Frame = 0
Query:   27 MCYNCRGIGHFARDCTVKICKRCQGRGHDE-----DKYGSPADLRTNLAVELPDCDSGSAVGL------EPWHVDSGASGTVMRSSRMMTNFRPCNKLVAGPDNVTHQIKGRGDIAVDLKSDVGSML--MAVKNAAYVPTFAYNLLSMSQCVRQGYKFET 173
             C+NC G+GHFA+DC     KR     ++      DK  S    +       P  DS   V L      + +++DS  +  V  +  +  NF+    +          I+G GDI + +  D+  +   + +KN  Y P F  NL+S S+C +  Y   T
Sbjct:  263 QCFNCSGLGHFAKDCPSPRKKRDNRNANNSVVKNSDKVLSVKSGKRGAFYAHPIFDSHDTVALSSVLSNDTFYLDSACTNHVCSNKSLFVNFKSIKPVPLELGEGYSSIEGIGDIEL-ITYDLDGIQNEVTLKNVCYAPKFKRNLISESKCDKASYDVHT 421          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A5N6L843_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6L843_9ASTR)

HSP 1 Score: 58.2 bits (139), Expect = 2.650e-6
Identity = 42/177 (23.73%), Postives = 83/177 (46.89%), Query Frame = 0
Query:   27 MCYNCRGIGHFARDCTVKICKRCQGRGHDEDKYGSPADLRTNLAVELP-DCDSGSAVGLEPWHVDSGASGTVMRSSRMMTNF--RPCNKLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFETDDPGMLVTKKSTGE--QLLMRPDNDLY 198
             CYNC   GH   DC  +   +   +  ++D+     + R  +A+    +C+       + W +DSG S  +     + T     P + +  G +  + Q++ +G I +++++    +L  V+   + P   YNLLS+ Q ++ GY+   D+    +T K TG+   ++ R  N+L+
Sbjct:  343 QCYNCNQFGHIKADCWNEPQAQAAVQDEEDDE-----EYRLFMAIGCEKNCEQ------DVWFLDSGCSNHMTPKRDIFTCMYNTPKHHVKLG-NGKSIQVENKGKIKLEVEAGKYRVLDDVQ---FAPELGYNLLSVGQLMKAGYRLSFDEDKCTITHKQTGDIMSVIWRSSNNLF 504          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A834R2W3_SARSC (Copia protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834R2W3_SARSC)

HSP 1 Score: 57.4 bits (137), Expect = 4.390e-6
Identity = 43/148 (29.05%), Postives = 68/148 (45.95%), Query Frame = 0
Query:   26 PMCYNCRGIGHFARDCTVKICKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGLEPWHVDSGASGTVMRSSRMMTNFRPC-NKLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFE 172
            P+C+NC+ IGH A+DC   +  R   + + + +Y   +D   N+A         +++    W +DSGA      + +++ N R   N  V  P      I   G   VDL++D     M+V    +VP F  N LS SQ  + G+  E
Sbjct:  206 PICFNCKEIGHLAKDCKSDLSYRILNKSNSQ-QY---SDRVVNIAS--------NSILANRWILDSGADSHFTGNWKILRNIRQVRNVFVRVPLGPPRAITHEG--LVDLRNDHSCFTMSVY---FVPGFQSNCLSQSQLRKDGFDLE 336          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A834RG90_SARSC (Uncharacterized protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RG90_SARSC)

HSP 1 Score: 57.4 bits (137), Expect = 4.780e-6
Identity = 43/148 (29.05%), Postives = 68/148 (45.95%), Query Frame = 0
Query:   26 PMCYNCRGIGHFARDCTVKICKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGLEPWHVDSGASGTVMRSSRMMTNFRPC-NKLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFE 172
            P+C+NC+ IGH A+DC   +  R   + + + +Y   +D   N+A         +++    W +DSGA      + +++ N R   N  V  P      I   G   VDL++D     M+V    +VP F  N LS SQ  + G+  E
Sbjct:  206 PICFNCKEIGHLAKDCKSDLSYRILNKSNSQ-QY---SDRVVNIAS--------NSILANRWILDSGADSHFTGNWKILRNIRQVRNVFVRVPLGPPRAITHEG--LVDLRNDHSCFTMSVY---FVPGFQSNCLSQSQLRKDGFDLE 336          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS)

HSP 1 Score: 56.6 bits (135), Expect = 8.230e-6
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   28 CYNCRGIGHFARDCTVKI--CKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGL-EPWHVDSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQG 168
            CY C  +GHF +DC VK+      + + H ED+     D      VE     + +   L   W VDSG S  +  + ++ ++ +  +  + +   DN  H+++  G I ++   + G  +  +KN  +VP    NLLS+   V  G
Sbjct:  248 CYRCGKLGHFKKDCRVKLKETNMAESKSHTEDE-----DWGKCFTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIE--GEEGGPI-TLKNVYHVPGVKKNLLSVVNAVDSG 385          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS)

HSP 1 Score: 56.6 bits (135), Expect = 8.260e-6
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   28 CYNCRGIGHFARDCTVKI--CKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGL-EPWHVDSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQG 168
            CY C  +GHF +DC VK+      + + H ED+     D      VE     + +   L   W VDSG S  +  + ++ ++ +  +  + +   DN  H+++  G I ++   + G  +  +KN  +VP    NLLS+   V  G
Sbjct:  248 CYRCGKLGHFKKDCRVKLKETNMAESKSHTEDE-----DWGKCFTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIE--GEEGGPI-TLKNVYHVPGVKKNLLSVVNAVDSG 385          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS)

HSP 1 Score: 56.6 bits (135), Expect = 8.770e-6
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   28 CYNCRGIGHFARDCTVKI--CKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGL-EPWHVDSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQG 168
            CY C  +GHF +DC VK+      + + H ED+     D      VE     + +   L   W VDSG S  +  + ++ ++ +  +  + +   DN  H+++  G I ++   + G  +  +KN  +VP    NLLS+   V  G
Sbjct:  248 CYRCGKLGHFKKDCRVKLKETNMAESKSHTEDE-----DWGKCFTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIE--GEEGGPI-TLKNVYHVPGVKKNLLSVVNAVDSG 385          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A6D2JWG0_9BRAS (Uncharacterized protein n=10 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JWG0_9BRAS)

HSP 1 Score: 56.6 bits (135), Expect = 8.980e-6
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   28 CYNCRGIGHFARDCTVKI--CKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGL-EPWHVDSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQG 168
            CY C  +GHF +DC VK+      + + H ED+     D      VE     + +   L   W VDSG S  +  + ++ ++ +  +  + +   DN  H+++  G I ++   + G  +  +KN  +VP    NLLS+   V  G
Sbjct:  248 CYRCGKLGHFKKDCRVKLKETNMAESKSHTEDE-----DWGKCFTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIE--GEEGGPI-TLKNVYHVPGVKKNLLSVVNAVDSG 385          
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Match: A0A6D2KB39_9BRAS (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB39_9BRAS)

HSP 1 Score: 56.6 bits (135), Expect = 9.310e-6
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   28 CYNCRGIGHFARDCTVKI--CKRCQGRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGL-EPWHVDSGASGTVMRSSRMMTNFRPCN--KLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQG 168
            CY C  +GHF +DC VK+      + + H ED+     D      VE     + +   L   W VDSG S  +  + ++ ++ +  +  + +   DN  H+++  G I ++   + G  +  +KN  +VP    NLLS+   V  G
Sbjct:  522 CYRCGKLGHFKKDCRVKLKETNMAESKSHTEDE-----DWGKCFTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIE--GEEGGPI-TLKNVYHVPGVKKNLLSVVNAVDSG 659          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1189.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2G8S714_9APHY6.100e-726.26Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
T1J0W8_STRMM7.610e-726.88Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
A0A5N6L843_9ASTR2.650e-623.73Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A834R2W3_SARSC4.390e-629.05Copia protein n=1 Tax=Sarcoptes scabiei TaxID=5228... [more]
A0A834RG90_SARSC4.780e-629.05Uncharacterized protein n=1 Tax=Sarcoptes scabiei ... [more]
A0A6D2KMT4_9BRAS8.230e-626.71Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6D2KKQ4_9BRAS8.260e-626.71Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6D2KB33_9BRAS8.770e-626.71Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6D2JWG0_9BRAS8.980e-626.71Uncharacterized protein n=10 Tax=Coluteocarpeae Ta... [more]
A0A6D2KB39_9BRAS9.310e-626.71ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 27..43
e-value: 0.0017
score: 27.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 28..42
e-value: 1.0E-6
score: 28.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 28..41
score: 9.520856
NoneNo IPR availableGENE3D4.10.60.10coord: 3..60
e-value: 6.7E-8
score: 34.2
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 22..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1189contigP-littoralis_Contig1189:20282..21052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1189.6.1mRNA_P-littoralis_Contig1189.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1189 20282..21052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1189.6.1 ID=prot_P-littoralis_Contig1189.6.1|Name=mRNA_P-littoralis_Contig1189.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp
RGNNRKKKSSDGKDGAEDDKPSAKGPMCYNCRGIGHFARDCTVKICKRCQ
GRGHDEDKYGSPADLRTNLAVELPDCDSGSAVGLEPWHVDSGASGTVMRS
SRMMTNFRPCNKLVAGPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAY
VPTFAYNLLSMSQCVRQGYKFETDDPGMLVTKKSTGEQLLMRPDNDLYVS
YGRRVDGEVETACAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf