mRNA_P-littoralis_Contig73.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE) HSP 1 Score: 488 bits (1255), Expect = 6.780e-172 Identity = 241/316 (76.27%), Postives = 274/316 (86.71%), Query Frame = 1
Query: 1 MPSFWQELLGGTVGGVVGMTVVYPLDTVKSRLQTSGRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGMLGASPRAAAANSYTQTSASFSQQGLE 948
MPS WQEL GGT GGV+GMTVVYPLDT+KSRLQTSGRSRYSSI+NVLT+MAR EGT+SLYRGLLSPVVGYGAMFA+SFSSYG+AGRFLLRRR A D LTL E G+AGA+AGVMNAPMRQ FERVKGVMQVRQG+K + PYSWSGAC VDLVRREG+AMGL RGMGATMLREP+QF IYYP YE+AK YL+PP+R TS+++P+P+L LAGG+AGCV WLPP Y LDV+KTRMQTAEPGVY GV DC +KT+RAEG P+LFRG+GAAMLRAFPMHGLVF+GYETTI +LGA PR++ S T + S +Q LE
Sbjct: 1 MPSLWQELAGGTAGGVIGMTVVYPLDTIKSRLQTSGRSRYSSISNVLTSMARKEGTLSLYRGLLSPVVGYGAMFAVSFSSYGYAGRFLLRRREAKATDELTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGVAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYLLPPDR--TSTAVPEPMLLALAGGLAGCVMWLPPTYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPRSSC--SPTSVNTSLVKQVLE 312
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: D7FM07_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM07_ECTSI) HSP 1 Score: 336 bits (861), Expect = 4.030e-113 Identity = 169/240 (70.42%), Postives = 196/240 (81.67%), Query Frame = 1
Query: 241 YGHAGR----FLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGMLGASPRAAAANSYTQTSASFSQQGLE 948
Y H R FLLRRR A D+LTL E G+AGA+AGVMNAPMRQ FERVKGVMQVRQG+K + PYSWSGAC VDLVRREGIAMGL RGMGATMLREP+QF IYYP YE+AK Y +PP+R TS+++P+P+L LAGG+AGCV WLPP+Y LDV+KTRMQTAEPGVY GV DC +KT+RAEG P+LFRG+GAAMLRAFPMHGLVF+GYETTI +LGA PR++ S T + S +Q LE
Sbjct: 2 YSHRWREKKGFLLRRREAKATDKLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYFLPPDR--TSTAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPRSSC--SPTSVNTSLVKQVLE 237
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: D7FLY9_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY9_ECTSI) HSP 1 Score: 315 bits (808), Expect = 9.610e-105 Identity = 163/248 (65.73%), Postives = 183/248 (73.79%), Query Frame = 1
Query: 148 MARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADE----KDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTS--SSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGML 873
MA EG MS YRGLLSPV GYGAMFA+SFSSYG A RFL R + L E AG +AG MN+P R F+RVK VMQVR G R PYSWSGACA DLVRREG+ GLFRG+ +TMLRE +Q AIYYP YEV K L R TS SS+P+P LQMLAGG+AGC WLPPVY LDV+KTR+Q+AEPGVY G WDC KTVR+EG P+LFRG+G +MLRAFPMHGLVFVGYETTIG+L
Sbjct: 1 MAAHEGLMSWYRGLLSPVAGYGAMFAVSFSSYGMASRFLQRXXXXXXXXXXSGEVFLWEKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLLA---RRSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLL 245
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A836C8G7_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G7_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.290e-82 Identity = 129/234 (55.13%), Postives = 163/234 (69.66%), Query Frame = 1
Query: 172 SLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGML 873
SLYRGL SPV+GYG +FA+SFS+ G A R+L R G +++EM LAGA+AG + AP RQ FERVKGVMQVR G K PYSWSGAC VDLVR EG+ MGLFRGMG+ +RE QFA+YYP Y+VAK ++P + P+ +LAGG+AG V WLPP+Y +DV+KT++QTA PG Y + D KTV EG LFRG+G +++RAFP+H +F GYE T+ L
Sbjct: 20 SLYRGLASPVLGYGVLFAMSFSANGQALRYLRNRDGRAANAPASVAEMTLAGAWAGAVQAPARQVFERVKGVMQVRNGAGGKAPYSWSGACLVDLVRTEGVQMGLFRGMGSQFIREVPQFALYYPAYDVAKRAILP------ADGHISPIHMLLAGGIAGTVQWLPPIYNIDVLKTKIQTAAPGTYKSIADAARKTVATEGTKGLFRGLGPSLVRAFPLHATIFAGYELTMAHL 247
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: W7TE76_9STRA (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE76_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.790e-79 Identity = 136/261 (52.11%), Postives = 169/261 (64.75%), Query Frame = 1
Query: 148 MARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQ--GEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEV---AKGYLMPPNRA-------------RTSSSLP-DPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGML 873
M R G SLYRGLLSP G+G FAISF+ YG RF R D K LTL EM +GA+AG++ +P RQ FER+K VMQVR+ G KPPY WSG C V LVR+EG+ GLFRG+ AT LRE QFA+YYP+YE+ A +M + A + SSS P P L +LAGGVAG V WLPP Y LDV+K+RMQ+A PGVY VWDC K+ + EG + FRG+ A++RAFP++ +F+GYETT+ L
Sbjct: 1 MVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFF---RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSXNESNIVHRKPSSSTPLPPHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL 258
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: K8Z8A3_NANGC (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8A3_NANGC) HSP 1 Score: 242 bits (617), Expect = 1.950e-75 Identity = 136/292 (46.58%), Postives = 174/292 (59.59%), Query Frame = 1
Query: 7 SFWQELLGGTVGGVVGMTVVYPLDTVKSRLQTSGRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQ--GEKRKPPYSWSGACAVDL-VRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGML 873
F ELL GTVGGVVG+T+++PLDT K RLQ Y +V+ +M R G SLYRGLLSP G+G FAISF+ YG RF R D K LTL EM +GA+AG++ +P RQ FER+K VMQVR+ G KPPY WSG C ++ VR M G++ I +R +SS+ P L +LAGGVAG V WLPP Y LDV+K+RMQ+A PGVY VWDC K+ + EG + FRG+ A++RAFP++ +F+GYETT+ L
Sbjct: 6 KFVHELLAGTVGGVVGITLIFPLDTAKVRLQ--AYPHYKGPIDVIRSMVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFF---RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLYEMNVRALQKMMAASNASGSSSNESNIV------------------HRKPSSSTPLPPHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL 274
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A7S1G657_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G657_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.000e-54 Identity = 119/285 (41.75%), Postives = 161/285 (56.49%), Query Frame = 1
Query: 13 WQELLGGTVGGVVGMTVVYPLDTVKSRLQTSGRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEK---DR-LTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYE 855
W+ + G GV G+TVVYPLDT K RLQT Y + L T+ + EG +LYRG+ +P+ GYGA+ ++ S+YG +LRRR A+ DR L++ E AGA AGV++ +R ERVK VMQVR+ + S C V +R EG+ + F AT+LRE Q Y+P +E+ K L P A SS+ D ++AGGVAG WLPP+Y +DVVK+RM+ G GV +V EG +L RG+G AM+RAFPMH + E
Sbjct: 50 WKRGVSGLTAGVSGLTVVYPLDTTKLRLQTCP-GEYKGAFDCLRTVVKREGFAALYRGMSAPIAGYGAINSLLLSTYGMTA-VVLRRRNAEAAGGVDRELSMEESMAAGAVAGVVSTVLRAPVERVKAVMQVRRNPDGTKVFRNSWRCLVGTMRTEGL-LSPFAAGRATLLRELFQGVAYFPAFEITKRALTP---AGGSSNDLDFWRLLIAGGVAGITQWLPPMYCIDVVKSRMEVPPAGSTPGVLGVLRASVAKEGGMVLLRGMGPAMVRAFPMHATILTTNE 328
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3) HSP 1 Score: 187 bits (474), Expect = 8.080e-53 Identity = 119/313 (38.02%), Postives = 173/313 (55.27%), Query Frame = 1
Query: 4 PSFWQELLGGTVGGVVGMTVVYPLDTVKSRLQTS--GRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRR-----GADEKD------RLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGV-------------YHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTI 864
P Q LLGGTVGG++G+ YP DTVK R+QT G + Y+ + + + +SEG ++LY G+LSPVVG + A+ F SYG ++LL R+ G+++ +L+ E LA AG++ + ERVK MQ G+ K C + LVR GI+ GLF+G T+LRE + Y+ Y++AK P + ++ S P L LAGG+AG + W+P +Y +DV+K+R+Q A+P Y GV DC V++ RAEG + FRG+ + RAFP H VF+GYE T+
Sbjct: 74 PKPAQHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQASGGKAFKSTLD----CVLSLVRTAGISGGLFKGFVPTVLREVPSYGAYFISYDMAKRAFCQPGQDVSTLS---PGLLALAGGIAGVMAWVP-IYPIDVIKSRIQ-AQPSSALVAASSGSSSRPYSGVVDCAVRSYRAEGLGVFFRGLTPTIARAFPCHAAVFLGYELTL 377
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A096PA99_OSTTA (Mitochondrial substrate/solute carrier n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PA99_OSTTA) HSP 1 Score: 180 bits (457), Expect = 5.080e-51 Identity = 117/310 (37.74%), Postives = 165/310 (53.23%), Query Frame = 1
Query: 1 MPSFWQELLGGTVGGVVGMTVVYPLDTVKSRLQTS--------GRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGLAGAYAGVMNAPMRQAFERVKGVMQVRQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLM-----------PPNRARTSSSLPDPVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAEGYPILFRGVGAAMLRAFPMHGLVFVGYETTIGML 873
+PS + + G + G+VG+T+V+PLDTVKSRLQT GR R V + R +G LYRG+ +P++ YGA+ A++FS+ A FL GA+ L GA+AG++++ +R ER+K V QV + + Y + + A+ LV+ G+ GLF G GAT+ RE Q A+Y+ Y+ K + P AR + + LAGG AG WL Y LDV K+R+Q A P Y GV DC VK+V EG +LFRG+ A+LRAFP+H +F E ML
Sbjct: 14 VPSVYDHAIAGQIAGMVGLTLVHPLDTVKSRLQTGCALAQTLDGRRR--GAYGVAVNLLRKDGAKGLYRGITAPMMAYGAINAVAFSANAGAKDFLRTTLGAEAAASAPAG--ALTGAFAGLVSSFVRGPAERLKTVQQVIDCDSGR--YRSATSTALTLVKEHGVVRGLFTGTGATIAREIPQCAVYFLTYDKVKSACLRALCGDADAHDAPAAARAGAIV-------LAGGSAGAFQWLL-TYPLDVTKSRIQAAPPHTYSGVIDCAVKSVVKEGPLVLFRGLNMALLRAFPLHASIFASCEAVHTML 309
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Match: A0A0L0D911_THETB (Carnitine/acylcarnitine n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D911_THETB) HSP 1 Score: 177 bits (448), Expect = 7.410e-50 Identity = 112/302 (37.09%), Postives = 171/302 (56.62%), Query Frame = 1
Query: 10 FWQELLGGTVGGVVGMTVVYPLDTVKSRLQTSGRSRYSSIANVLTTMARSEGTMSLYRGLLSPVVGYGAMFAISFSSYGHAGRFLLRRRGADEKDRLTLSEMGL-AGAYAGVMNAPMRQAFERVKGVMQV--RQGEKRKPPYSWSGACAVDLVRREGIAMGLFRGMGATMLREPIQFAIYYPVYEVAKGYLMPPNRARTSSSLPD---PVLQMLAGGVAGCVHWLPPVYWLDVVKTRMQTAEPGVYHGVWDCYVKTVRAE-GYPILFRGVGAAMLRAFPMHGLVFVGYETTIGMLGASPRAA 894
+W ++ G +GG+VG+ + +PLDT+K R+ +Y S+ L +M SEG SLYRGL +PV GYG + A++F S+ A +L DE +++++ + A A+AG++ + +R E K V Q G R PP+ + +VR +G + LFRG+GAT+ RE Q+AIYYP Y + K L + +LP PV AG +AG W+P + +DV+KTRMQ A G Y V C +T+ AE G F+G A++RA P+H VF+GY+TT+ +L ++ A+
Sbjct: 17 WWHSVVAGNMGGIVGLAISFPLDTLKVRMMMEP-DKYVSLGATLRSMVASEGPASLYRGLTAPVAGYGVINAVAFGSFEWAKSWL--DEVVDETRAGSMAQVVIPAAAFAGLVQSFVRGPVELAKTVQQAWHNPGNARAPPFKSAFHGIAHVVRNDGPS-ALFRGLGATIAREVPQYAIYYPTYALLKPAL--------TDALPSKYAPVAVAAAGALAGSAQWVPTIP-VDVIKTRMQGAPAGTYTSVVHC-ARTLWAEQGLATFFKGTAPALIRAAPLHAGVFLGYDTTMKLLASTSTAS 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig73.5.1 >prot_P-littoralis_Contig73.5.1 ID=prot_P-littoralis_Contig73.5.1|Name=mRNA_P-littoralis_Contig73.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=317bp MPSFWQELLGGTVGGVVGMTVVYPLDTVKSRLQTSGRSRYSSIANVLTTMback to top mRNA from alignment at P-littoralis_Contig73:5653..14752- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig73.5.1 ID=mRNA_P-littoralis_Contig73.5.1|Name=mRNA_P-littoralis_Contig73.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9100bp|location=Sequence derived from alignment at P-littoralis_Contig73:5653..14752- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig73:5653..14752- >mRNA_P-littoralis_Contig73.5.1 ID=mRNA_P-littoralis_Contig73.5.1|Name=mRNA_P-littoralis_Contig73.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=951bp|location=Sequence derived from alignment at P-littoralis_Contig73:5653..14752- (Pylaiella littoralis U1_48)back to top |