prot_P-littoralis_Contig727.66.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig727.66.1
Unique Nameprot_P-littoralis_Contig727.66.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length112
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig727.66.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.350e-21
Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 0 
Query:    1 RLALGVKGLNVFARSEQVAILKASYKVVPMNVSTLRNEGNFKDFLMGRYNMTPSITRWRAFRLLRS-EGNVGVCVKEFMHSRDWSGPTRDRKPRAGTPPHSMFIGSPPNLR 110
            R + G+KG N+F R++   +L+ASY  VP+  STL NEGNF   L GR N  P IT +RAFR+ +  +G V V VK  MH  +  G  R+       PPH +FIG PP ++
Sbjct:   69 RFSRGIKGKNIFTRTQLAEVLQASYTEVPVFCSTLGNEGNFNGLLQGRVNRVPDITTYRAFRVEKGGDGRVKVRVKHHMHGTECKGIGRNGDVDPNAPPHDLFIGHPPRIQ 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig727.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCW3_9PHAE1.350e-2144.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig727contigP-littoralis_Contig727:135229..135564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig727.66.1mRNA_P-littoralis_Contig727.66.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig727 135228..135564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig727.66.1 ID=prot_P-littoralis_Contig727.66.1|Name=mRNA_P-littoralis_Contig727.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
RLALGVKGLNVFARSEQVAILKASYKVVPMNVSTLRNEGNFKDFLMGRYN
MTPSITRWRAFRLLRSEGNVGVCVKEFMHSRDWSGPTRDRKPRAGTPPHS
MFIGSPPNLRGD
back to top