mRNA_P-littoralis_Contig726.3.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 5.720e-131 Identity = 342/425 (80.47%), Postives = 355/425 (83.53%), Query Frame = 1
Query: 118 GIRGLGRIFGVGTHPVVAEAQARAEALVHGRGAK------------GXXXXXXXXXXXKKRKRAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSLSAATKASSSSGRPTRPEQAQQLAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTSSESCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVPSPNRVYYVVDPKEIMTMNEDFMCPFLARSPQLLVPGMLKVGFSAKSNRLSSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLM 1356
G+RGLGRIFGVGTHPVVAEAQARAEA+VHGRG XXXXXXXXXXX AVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGRE+EE+DR AE RRVASLREIRLQVLL FLEYRGRCE+GRKEWQSVLDE FEM+MPITPYR+FPPQQVQGG RVIKGLDGVIADT+SLS ATK S SGR +RPE+ AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX AGVVPSPNRVYYVVDPKE+M +N+ FMCPFLARSPQLLVPGMLK FS KSNRL SVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLM
Sbjct: 194 GVRGLGRIFGVGTHPVVAEAQARAEAMVHGRGGARSGXXXXXXXXXXXXXXXXXXXXXXXXXXAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREREEMDRRAEERRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLSVATKGPSPSGRQSRPEELP-AAPSATANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXVAGVVPSPNRVYYVVDPKEVMGLNQAFMCPFLARSPQLLVPGMLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLM 601
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI) HSP 1 Score: 345 bits (885), Expect = 3.460e-105 Identity = 247/443 (55.76%), Postives = 268/443 (60.50%), Query Frame = 1
Query: 271 AVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSLSAATKASSSSGRPTRPEQAQQLAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTSSESCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVPSPNRVYYVVDPKEIMTMNEDFMCPFLARSPQLLVPGMLKVGFSAKSNRLSSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLM----GGTKAAAGAEXXXXXXXXXXXXXXXXXTVAPSAAVRSLAGTPVPPACVGQEEGVLHSVLQDIREWRVSSTVVDDPNQ 1587
AVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGRE+EE+D+ AE RRVASLREIRLQVLL FLEYRGRCE+GRKEWQSVLDE FEM+MPITPYR+FPPQQVQGG RVIKGLDGVIADT+SLS ATK S SGR + E+ P GV + XXXXXXXXXXXXX GV+ + +P ++ F +LLVPGMLK FS KSNRL SVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLM GG +AA + + A PP VGQ+EGVLHSVLQDIREWRVSSTV+DDPNQ
Sbjct: 36 AVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREREEMDQRAEARRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLSVATKGPSPSGRQSSREERPASPSPTASSRGGCPQGQSQAQEFPQQEKRLFFLGHEDADARGGGGTAGGVFLIEGGGWLDVL-------GVVFGD--VRGRRVGXXXXXXXXXXXXXLCCGSRAFAQPGVLRGGSEGGDGAEPG----LHVSF-------PGELLVPGMLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLMAAKGGGVPSAA----------------RDRASESSGAXXXXXXTAANPPPFVGQDEGVLHSVLQDIREWRVSSTVLDDPNQ 442
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 154 bits (390), Expect = 1.730e-37 Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 1
Query: 256 KKRKRAV-LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSL 666
+KRKR V LS+EER +QNRDRNREHARNTRLRKKAFV+ELKKQV++L + RE+EE +R E +R A++ EIR QVL FL+YRGR W S+LDE F MRMP+TPYR+FP QVQ G R +KG++ V+AD SL
Sbjct: 103 RKRKRNVPLSQEERMQQNRDRNREHARNTRLRKKAFVDELKKQVQDLAAAREREERERHLESQRSAAMNEIRFQVLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVKGIEDVLADVASL 240
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A7S2UTL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTL0_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.460e-34 Identity = 78/138 (56.52%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 256 KKRKRAV-LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSL 666
KKRKRA LSKEER +QNRDRNREHARNTRLRKKAFVEELK+QV++L + RE E+ +R E +R +++ ++R QVL F+EYRG E W ++L F MR+P+TPYR+ P Q +GG R + G+D V+ADT S+
Sbjct: 163 KKRKRASSLSKEERMQQNRDRNREHARNTRLRKKAFVEELKRQVQDLAAVRESEQRERQLEDQRKSAMNQVRFQVLQTFMEYRGSGETNESLWAAILSPDFRMRLPLTPYRSCPASQERGGSRYLHGIDAVVADTTSI 300
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.260e-23 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 265 KRAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSL 666
+R +S +E+A+ +RDRNR+HARNTRLRKKA++EEL++ V++L + R+ + AEG R A L+ +R VL M L YR R +W + L+E+F +PITPYR+FP +V G R+I G+D +IAD SL
Sbjct: 104 RRGQMSMDEKAEASRDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASL 237
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A7S2YSB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSB7_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.420e-21 Identity = 57/133 (42.86%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 268 RAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSL 666
RA L+ EE+AKQNRDRNREHAR+TRLRKKA+V++LK+ VE L + R +E R + +A + +R V+ FL +R CE ++W ++L++ F ++ P+TPYR+F +++ R+ KG++ +I D+ S+
Sbjct: 178 RADLTAEEKAKQNRDRNREHARSTRLRKKAYVQKLKELVECLHAERTEEVRQRRVAIQHLAEKQNVRRSVVRNFLRFRTTCETDHRKWATLLEDDFWLKQPVTPYRSFRRSEIEQECRISKGIEAMICDSASV 310
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: K0S4C2_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4C2_THAOC) HSP 1 Score: 103 bits (258), Expect = 9.350e-20 Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 265 KRAVLSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYR 585
+RA L++EERAKQNRDRNREHARNTRLRKKA+VEELK+ + ELVS R+ +++R E +R RE+R +V+ FL RGR + W ++L++ F + +P TP+R
Sbjct: 117 RRAALTQEERAKQNRDRNREHARNTRLRKKAYVEELKRTLTELVSQRDAADVERRHEAQRNREQREVRFRVMEEFLRLRGRNDPSSARWVAILEDNFVLTLPRTPFR 223
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: B7FWL4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWL4_PHATC) HSP 1 Score: 106 bits (265), Expect = 1.000e-19 Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 277 LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGLDGVIADTMSLS 669
L+ EERA+QNRDRNREHAR+TRLRKKA+V++L++ VE L S R +E R + +A + +R +V+ FL+Y E ++W ++L++ F ++ P+TPYR+FP +++ R+ +G+D +I D SLS
Sbjct: 193 LTSEERAQQNRDRNREHARSTRLRKKAYVQKLRELVEGLHSERTEEVRRRRVAIQHLAEKQNVRKKVVRNFLQYGSNYETDERKWGTILEDDFYLKQPVTPYRSFPRAEIEKECRISRGIDSIINDGASLS 323
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A7S4DJE8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJE8_HETAK) HSP 1 Score: 105 bits (262), Expect = 1.280e-19 Identity = 58/135 (42.96%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 277 LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGG-----MRVIKGLDGVIADTMSL 666
L+ E++ +++RNRE+ARNTRLRKK ++E+LK QV+EL + +E+ E + +R A R +R+QVL FL RG E ++W ++LDE F + +P TPYR+F ++ GG +R ++G++GV+ADT SL
Sbjct: 191 LTLEQKVLASKERNRENARNTRLRKKLYIEKLKAQVDELQAAQERREREERVRAQRAADRRRVRVQVLTDFLLCRGTGEASYQQWSTLLDERFALTLPATPYRSFLQSELVGGPGGPPLRRVRGIEGVLADTRSL 325
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Match: A0A7S2A2E8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A2E8_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.230e-19 Identity = 62/133 (46.62%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 277 LSKEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEELVSGREQEELDRLAEGRRVASLREIRLQVLLMFLEYRGRCEVGRKEWQSVLDET-FEMRMPITPYRTFPPQQVQGG--MRVIKGLDGVIADTMSL 666
++ EE+ K NRDRNREHARNTRLRKKA++E+LK V+EL R+ +R+ + + R+ VL+ F R CE R+ W S+LDE+ F MP+TPYR+FP +VQ R I G+DG+++DT SL
Sbjct: 216 MTPEEKLKANRDRNREHARNTRLRKKAYLEKLKVTVDELCRERDTLVSERVGAASLLIEMHSTRIDVLMSFFALRSACERRRELWASILDESCFACVMPVTPYRSFPSSEVQVSKCQRTILGIDGMMSDTASL 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig726.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig726.3.3 >prot_P-littoralis_Contig726.3.3 ID=prot_P-littoralis_Contig726.3.3|Name=mRNA_P-littoralis_Contig726.3.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=571bp MFLEYRGRCEVGRKEWQSVLDETFEMRMPITPYRTFPPQQVQGGMRVIKGback to top mRNA from alignment at P-littoralis_Contig726:18458..27704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig726.3.3 ID=mRNA_P-littoralis_Contig726.3.3|Name=mRNA_P-littoralis_Contig726.3.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9247bp|location=Sequence derived from alignment at P-littoralis_Contig726:18458..27704- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig726:18458..27704- >mRNA_P-littoralis_Contig726.3.3 ID=mRNA_P-littoralis_Contig726.3.3|Name=mRNA_P-littoralis_Contig726.3.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1713bp|location=Sequence derived from alignment at P-littoralis_Contig726:18458..27704- (Pylaiella littoralis U1_48)back to top |