prot_P-littoralis_Contig722.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig722.6.1
Unique Nameprot_P-littoralis_Contig722.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length189
Homology
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BLAST of mRNA_P-littoralis_Contig722.6.1 vs. uniprot
Match: D8LD01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD01_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.200e-29
Identity = 89/175 (50.86%), Postives = 102/175 (58.29%), Query Frame = 0 
Query:   23 FDFAHAFHSPLRSTSDSRHRHPCLSPXXXXXXXXXXXXXXINDASRPSSRRRVV----GVQLALHSGDALVVGA-VVAGAAAIAASRGLSTLAGAFKLADYRTTSGHDLCLDEKLQSKRRRLLPSEASPGSSAEG----GLPGSGLGEDMDWREEIRLASQLPD----YDNAAGM 184
            F  A+AFH     T  SR  H  ++P              +  AS  + RRR       +QLAL S +AL VGA V+AGAA I A RGLSTLAGAFKLADYRTTSGHDL LDEKL SKRRRL PS  +   S E     G   + LG + DWREEIRLASQLPD    +  + GM
Sbjct:   17 FGVANAFHVYPPPTLSSRGGHVEIAPTRPFSC--------LPAASCGAHRRRSCCGRRELQLALES-EALAVGAAVIAGAAIIGAGRGLSTLAGAFKLADYRTTSGHDLRLDEKLGSKRRRLDPSSETTSGSLESTGGRGASETALGVETDWREEIRLASQLPDDSVVFGGSGGM 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig722.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD01_ECTSI1.200e-2950.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig722contigP-littoralis_Contig722:43850..46034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig722.6.1mRNA_P-littoralis_Contig722.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig722 42868..46098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig722.6.1 ID=prot_P-littoralis_Contig722.6.1|Name=mRNA_P-littoralis_Contig722.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp
MRRVSYAAKVVACTTLAACRGPFDFAHAFHSPLRSTSDSRHRHPCLSPPP
SSSSPSSSSSSSINDASRPSSRRRVVGVQLALHSGDALVVGAVVAGAAAI
AASRGLSTLAGAFKLADYRTTSGHDLCLDEKLQSKRRRLLPSEASPGSSA
EGGLPGSGLGEDMDWREEIRLASQLPDYDNAAGMRDIL*
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