mRNA_P-littoralis_Contig720.25.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig720.25.1
Unique NamemRNA_P-littoralis_Contig720.25.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A7H0VG77_9FLAO (Triosephosphate isomerase n=1 Tax=Croceimicrobium hydrocarbonivorans TaxID=2761580 RepID=A0A7H0VG77_9FLAO)

HSP 1 Score: 334 bits (857), Expect = 6.030e-110
Identity = 170/236 (72.03%), Postives = 198/236 (83.90%), Query Frame = 2
Query:  692 LINAAEKYLATKPVHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEILR 1399
            L+ A++ YL   P  HIDVIVAPPA+QLVQ+ +LS N +LSV AQNM A ENGA+TGEISASM+ DAG ELVI+GHSERREIFGE DALLE KL KALE+ LYPIFCVGESL QR+   HF+HIE QL+AGL++F+ ++IP II+AYEPIWAIGTGETAS EQAQEMH+FIRK+L  +FSA VADE SILYGGSVKP+NA+ LF QPDIDGGLIGGAS+  +SF  LI+IGE ILR
Sbjct:   22 LVKASDDYLNANPAKHIDVIVAPPAHQLVQTVKLSTNTKLSVVAQNMCAHENGAYTGEISASMLVDAGVELVIVGHSERREIFGEDDALLEAKLHKALEYDLYPIFCVGESLEQRQAGIHFKHIEKQLEAGLKNFNADQIPHIILAYEPIWAIGTGETASPEQAQEMHAFIRKFLTGKFSATVADETSILYGGSVKPSNAKDLFSQPDIDGGLIGGASIQIDSFLELIKIGESILR 257          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A2T4WJT3_9BACT (Triosephosphate isomerase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WJT3_9BACT)

HSP 1 Score: 291 bits (744), Expect = 6.720e-93
Identity = 141/236 (59.75%), Postives = 184/236 (77.97%), Query Frame = 2
Query:  692 LINAAEKYLATKPVHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEILR 1399
            L+ A+  ++   P+ H++V++APP  QL Q+ + + N R+S+AAQNM   +NGAFTGEISASM+K+ G ELVIIGHSERREI GES+A +  KLKKAL   LYPI CVGE L  RK+  HF  ++ QL++ L+ FSG+E+  ++IAYEPIWAIGTGETAS  QAQEMH+FIRK++A  ++A +ADE+S+LYGGSVKP NA+ +F QPD+DGGLIGGA+  AESF  LI+IGE +LR
Sbjct:   22 LVKASNAFVEANPLAHVEVVIAPPYLQLQQAVKNAPNGRVSIAAQNMNENDNGAFTGEISASMLKEIGVELVIIGHSERREILGESNAQIHAKLKKALRSNLYPILCVGEKLEDRKSGNHFNFVQGQLESALEGFSGDELSSLVIAYEPIWAIGTGETASPAQAQEMHAFIRKHIASIYTATLADEISVLYGGSVKPENAKEIFAQPDVDGGLIGGAATQAESFIELIKIGESVLR 257          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A521C5Z3_9BACT (Triosephosphate isomerase n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521C5Z3_9BACT)

HSP 1 Score: 249 bits (636), Expect = 1.050e-76
Identity = 124/219 (56.62%), Postives = 164/219 (74.89%), Query Frame = 2
Query:  737 HIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEI 1393
            ++DV+V PP   +  +S++  +  + V  QN+  EENGAFTGEIS SM+ ++G   VIIGHSERR+ FGE+D  + +++KKA+EH L P+ CVGESL+QRK +EHF  ++NQ+KA L   S ++   ++IAYEPIWAIGTGETAS EQAQEMH  IR  LA+ +S  VAD ++ILYGGS+KPANA  L  QPD+DGGLIGGASLDA SF+ +I I E++
Sbjct:   36 NVDVLVCPPFVSIGMASEILHDTDIQVGGQNLHFEENGAFTGEISGSMLVESGCNYVIIGHSERRQYFGETDETVNKRVKKAIEHKLAPVVCVGESLAQRKKDEHFDLVKNQVKAALFGLSEDDAMDVVIAYEPIWAIGTGETASPEQAQEMHKHIRDVLAELYSQDVADGINILYGGSMKPANAEELLSQPDVDGGLIGGASLDAGSFSEIITIAEDL 254          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A2D8CGL7_9BACT (Triosephosphate isomerase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CGL7_9BACT)

HSP 1 Score: 249 bits (635), Expect = 1.480e-76
Identity = 124/219 (56.62%), Postives = 164/219 (74.89%), Query Frame = 2
Query:  737 HIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEI 1393
            ++DV+V PP   +  +     +  + V AQN+  EENGAFTGEIS SM+ ++G   VIIGHSERR+ FGE+D  + ++  KALEH L PI CVGESL QRK+++H++ ++NQ+ A L + S E++  ++IAYEPIWAIGTGETAS EQAQEMH  IRK +A+ +S   AD+V+ILYGGS+KPANA  L  QPD+DGGLIGGASLDA+SF+ +I I EE+
Sbjct:   36 NVDVLVCPPFVSIGMAVNYLHDTDIQVGAQNLHFEENGAFTGEISGSMIAESGCNYVIIGHSERRQYFGETDTTVNKRTHKALEHKLAPIVCVGESLDQRKSDKHYELVKNQVTAALFNISEEDLLDVVIAYEPIWAIGTGETASPEQAQEMHEHIRKIIAELYSQDAADQVNILYGGSMKPANAHELLSQPDVDGGLIGGASLDADSFSEIITIAEEL 254          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: G8R4Y6_OWEHD (Triosephosphate isomerase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801) TaxID=926562 RepID=G8R4Y6_OWEHD)

HSP 1 Score: 247 bits (631), Expect = 6.070e-76
Identity = 119/237 (50.21%), Postives = 171/237 (72.15%), Query Frame = 2
Query:  686 YHLINAAEKYLATKPVHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEIL 1396
            Y LI     +     + +++V+V+PP   L ++++++ + +L+++AQN + + +GA+TGE+S  M+K AG    +IGHSERRE +G++D  +  KLK+ +E  + P+ CVGE L  RK  +  + + +QLK  L  FS +E+  ++IAYEP+WAIGTGETAS EQAQE+H+FIRKYL Q +SA VA+ VSILYGGSVKP NA+ +FGQPD+DGGLIGGASL  E F  LI+IG+E+L
Sbjct:   20 YQLIEDLSNFCEGNKLDNVEVVVSPPFIHLAKAAEMTAHSKLTISAQNCSDQLSGAYTGEVSVEMLKAAGVNWTLIGHSERREYYGDTDEFVNGKLKRTIEAEMTPVLCVGEVLEDRKAGKQEEVVASQLKGALAGFSADEVKNMVIAYEPVWAIGTGETASPEQAQEVHAFIRKYLTQTYSAEVANAVSILYGGSVKPENAKEIFGQPDVDGGLIGGASLKYEQFVKLIEIGQEVL 256          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: UPI000781BEA4 (triose-phosphate isomerase n=1 Tax=Aquimarina longa TaxID=1080221 RepID=UPI000781BEA4)

HSP 1 Score: 244 bits (623), Expect = 7.870e-75
Identity = 124/212 (58.49%), Postives = 157/212 (74.06%), Query Frame = 2
Query:  743 DVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQ 1378
            +VIVAP A  L  +++  +   + VAAQNM   ENGA+TGEISA M+K  G E VI+GHSERR  FGE+D LL  K+ KAL+H +  IFC GE L  RK++ HF  +ENQLK GL   + E+   +++AYEP+WAIGTGETAS EQAQEMH+FIR  +A+ ++  +ADEVSILYGGSVKP NA  +F +PD+DGGLIGGASLDAESF A++ 
Sbjct:   37 EVIVAPTAVNLYMATEELQQVDIKVAAQNMHQAENGAYTGEISADMLKRVGVETVILGHSERRAYFGETDELLASKVSKALQHDMTVIFCFGEELQDRKSDNHFAIVENQLKNGLFHINTEDWKNVVLAYEPVWAIGTGETASPEQAQEMHAFIRNTIAKAYTQQIADEVSILYGGSVKPNNANEIFAKPDVDGGLIGGASLDAESFVAIVN 248          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: UPI001B3A69A1 (triose-phosphate isomerase n=1 Tax=Aquimarina sp. MMG016 TaxID=2822690 RepID=UPI001B3A69A1)

HSP 1 Score: 244 bits (623), Expect = 7.870e-75
Identity = 126/216 (58.33%), Postives = 155/216 (71.76%), Query Frame = 2
Query:  731 VHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQ 1378
            V   +++VAP    L  +S+  K   + VAAQNM   ENGA+TGEISA M+KD G + VI+GHSERR  FGE+DALL  K+  AL+HG+  IFC GE L  RK++ HF  +E+QLK GL          I++AYEP+WAIGTGETAS EQAQEMH+FIR  + + F A VADEVSILYGGSVKP NA  +F +PD+DGGLIGGASLDAESF A+ +
Sbjct:   33 VSEAEIVVAPTYVNLYSASEALKGSGVKVAAQNMHQAENGAYTGEISADMLKDIGVKTVILGHSERRAYFGETDALLVEKVNTALKHGIKVIFCFGEELDDRKSDNHFNVVESQLKNGLFHIDAANWKNIVLAYEPVWAIGTGETASPEQAQEMHAFIRSTIEKAFDATVADEVSILYGGSVKPNNAVEIFAKPDVDGGLIGGASLDAESFAAIAK 248          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: UPI00191D6984 (triose-phosphate isomerase n=1 Tax=Aquimarina mytili TaxID=874423 RepID=UPI00191D6984)

HSP 1 Score: 241 bits (614), Expect = 1.750e-73
Identity = 124/210 (59.05%), Postives = 155/210 (73.81%), Query Frame = 2
Query:  743 DVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTAL 1372
            ++IVAP    L +++Q  K   ++VAAQNM   +NGAFTGEISA M+K+ G E VI+GHSERR  FGE+DALL  K+  AL+HG+  IFC GE L  RK+N HF  +ENQLK  L     E    I++AYEP+WAIGTGETAS +QAQEMH+FIR  +A  F+ ++ADEVSILYGGSVKP NA  +F +PD+DGGLIGGA+LDA SF A+
Sbjct:   37 NIIVAPTFTNLYKATQDLKGSSITVAAQNMHQADNGAFTGEISADMLKNIGVETVILGHSERRAYFGETDALLADKVNTALKHGMKVIFCFGEELQDRKSNSHFSVVENQLKNVLFHIKEEHWKNIVLAYEPVWAIGTGETASPDQAQEMHAFIRNTIANAFTPSIADEVSILYGGSVKPNNAEEIFAKPDVDGGLIGGAALDASSFEAI 246          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A7X8RNU9_9FLAO (Triosephosphate isomerase n=1 Tax=Lutibacter sp. B1 TaxID=2725996 RepID=A0A7X8RNU9_9FLAO)

HSP 1 Score: 240 bits (613), Expect = 2.630e-73
Identity = 122/229 (53.28%), Postives = 168/229 (73.36%), Query Frame = 2
Query:  692 LINAAEKYLATKPVHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQ 1378
            L+    K +  K +++  VIVAP    L + S+++K  ++ VAAQNM  E+NGAFTGE+SA M+K  G ++VI+GHSERRE FGE+DALL +K+  AL + +  IFC GE L  RK+ +HF  +E+Q+K  L     +    II+AYEP+WAIGTGETAS EQAQEMH+FIRK +A+++++ VA++VSILYGGSVKPANA  +F +PD+DGGLIGGA+L+ + F A+I 
Sbjct:   22 LVKKVAKSIKKKSLNNTRVIVAPTFVSLDKVSKIAKETKVEVAAQNMHFEKNGAFTGEVSAEMLKSVGVKIVILGHSERREYFGETDALLAKKVDTALANKMEVIFCFGEVLEDRKSGKHFDVVESQIKNALFHLEAKAWKNIILAYEPVWAIGTGETASPEQAQEMHAFIRKIVAEKYTSEVAEDVSILYGGSVKPANAEEIFSKPDVDGGLIGGAALNKDDFKAIID 250          
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Match: A0A2A4RFU8_9FLAO (Triosephosphate isomerase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2A4RFU8_9FLAO)

HSP 1 Score: 240 bits (613), Expect = 2.630e-73
Identity = 123/229 (53.71%), Postives = 168/229 (73.36%), Query Frame = 2
Query:  692 LINAAEKYLATKPVHHIDVIVAPPAYQLVQSSQLSKNERLSVAAQNMAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKKALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIAYEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVKPANARGLFGQPDIDGGLIGGASLDAESFTALIQ 1378
            L+   +K +    + +  VI+APP   L  +S+ +K+  + +AAQNM A+E+GAFTGEISASM+K    +LV++GHSERRE FGE+DA L  K+  AL++ L  IFC GE L  RK+  HF+ +E Q+K  L   + ++   II+AYEP+WAIGTGETAS EQAQEMH+FIR+ +AQ++ + VA+EVSILYGGSVKPANA  +F +PD+DGGLIGGA+L +E F AL++
Sbjct:   22 LVKELKKGIKNIKLDNTRVIIAPPFTNLQNASKKTKDSSVEIAAQNMCAKESGAFTGEISASMIKSIHVDLVVLGHSERREYFGETDASLAAKVDTALKNDLEIIFCFGEVLEDRKSGNHFKIVEEQIKKALFHLNSDDWKNIILAYEPVWAIGTGETASPEQAQEMHAFIRELVAQRYISDVAEEVSILYGGSVKPANAEEIFSKPDVDGGLIGGAALKSEDFLALVK 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig720.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7H0VG77_9FLAO6.030e-11072.03Triosephosphate isomerase n=1 Tax=Croceimicrobium ... [more]
A0A2T4WJT3_9BACT6.720e-9359.75Triosephosphate isomerase n=1 Tax=Bacteroidetes ba... [more]
A0A521C5Z3_9BACT1.050e-7656.62Triosephosphate isomerase n=1 Tax=Gracilimonas men... [more]
A0A2D8CGL7_9BACT1.480e-7656.62Triosephosphate isomerase n=2 Tax=Balneolaceae Tax... [more]
G8R4Y6_OWEHD6.070e-7650.21Triosephosphate isomerase n=1 Tax=Owenweeksia hong... [more]
UPI000781BEA47.870e-7558.49triose-phosphate isomerase n=1 Tax=Aquimarina long... [more]
UPI001B3A69A17.870e-7558.33triose-phosphate isomerase n=1 Tax=Aquimarina sp. ... [more]
UPI00191D69841.750e-7359.05triose-phosphate isomerase n=1 Tax=Aquimarina myti... [more]
A0A7X8RNU9_9FLAO2.630e-7353.28Triosephosphate isomerase n=1 Tax=Lutibacter sp. B... [more]
A0A2A4RFU8_9FLAO2.630e-7353.71Triosephosphate isomerase n=1 Tax=Flavobacteriacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig720contigP-littoralis_Contig720:144238..145639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121930.AQXG01000001_gene1169
Preferred nametpiA
PFAMsTIM
Model size1402
Max annot lvl976|Bacteroidetes
KEGG rclassRC00423
KEGG koko:K01803
KEGG ReactionR01015
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
Exons1
Evalue5.25e-75
EggNOG OGsCOG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,1IPGF@117747|Sphingobacteriia
EC5.3.1.1
DescriptionInvolved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
Cds size573
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791501.0047383-CDS-P-littoralis_Contig720:144237..1448101680791501.0047383-CDS-P-littoralis_Contig720:144237..144810Pylaiella littoralis U1_48CDSP-littoralis_Contig720 144238..144810 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791502.4745958-UTR-P-littoralis_Contig720:144810..1456391680791502.4745958-UTR-P-littoralis_Contig720:144810..145639Pylaiella littoralis U1_48UTRP-littoralis_Contig720 144811..145639 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig720.25.1prot_P-littoralis_Contig720.25.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig720 144238..144810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig720.25.1

>prot_P-littoralis_Contig720.25.1 ID=prot_P-littoralis_Contig720.25.1|Name=mRNA_P-littoralis_Contig720.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=191bp
MAAEENGAFTGEISASMVKDAGAELVIIGHSERREIFGESDALLERKLKK
ALEHGLYPIFCVGESLSQRKNNEHFQHIENQLKAGLQSFSGEEIPQIIIA
YEPIWAIGTGETASQEQAQEMHSFIRKYLAQQFSAAVADEVSILYGGSVK
PANARGLFGQPDIDGGLIGGASLDAESFTALIQIGEEILR*
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mRNA from alignment at P-littoralis_Contig720:144238..145639-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig720.25.1 ID=mRNA_P-littoralis_Contig720.25.1|Name=mRNA_P-littoralis_Contig720.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1402bp|location=Sequence derived from alignment at P-littoralis_Contig720:144238..145639- (Pylaiella littoralis U1_48)
TTAATTCTCTTAGTGCTTATTGGCATTGTCTTCATCAATCGCAAATACAT TCAGCCAGTTTTAGGTTCCGGACCACAGAACATTGTACTTAGCCTGAGCT TTGTAGGATGTATTATATTGGGATATTACGTTTTAAATCATTTACCACAA GGGATGAAATCAGCTGAGGAATTAGGACTTAAGCCAACCAAATATGCAAC TATCTATACCTTAGAAAACAGCAAAACAGGTGAAAGCCAAAAGGTAAGCT CCGAAGCCTATGTATCGGAGAATTGGTGGCAAAAAGAAGATTGGAAAATC CTAAAAGATCAAAGCGAAACAGTAGTGCTAGAAGAGGGCTATGAGCCACC GGTACATGATTTTATTATCGATTTAGGCGGGGCGGAAATTACTGACCAAG TTTTAGGGCAAGAACGAATCTTCCTACTTGTGGCTTATTCCTTAGAGAAA AAGCGAAGGCTCGGCTTATGAAGCATTAAACACTTTTGCACTGGCGGCTT CCGAACAGGAAATCCCCTTTTTAGGCCTAACCGCCAGTCTTCCCTCGGTT ATTGAAGAAAAGGCAAAAGCTTGGAACACGCGTTTTAGTTTCGCTAGTGT TGATGAAACTACTTTAAAAACCATTGTTCGCGCTAATCCTGGCATCGTAC TATTGGAGAATGGTGTGGTGATTAAAAAATGGCATTATCATTTAATTAAT GCGGCAGAAAAATATTTGGCCACGAAGCCCGTGCATCATATCGATGTTAT TGTTGCGCCACCGGCTTATCAATTGGTGCAATCATCACAACTGAGTAAAA ATGAACGCCTATCTGTAGCAGCTCAAAATATGGCTGCCGAAGAAAACGGT GCCTTTACCGGTGAAATTAGTGCTAGCATGGTTAAAGACGCTGGTGCGGA GCTGGTTATAATTGGTCACTCCGAGCGACGTGAAATATTTGGGGAATCCG ATGCATTATTGGAGCGAAAACTTAAAAAAGCTCTGGAGCATGGCCTCTAC CCTATTTTTTGTGTGGGCGAAAGTTTGAGTCAGCGAAAAAATAATGAGCA TTTCCAGCATATTGAGAACCAGTTAAAAGCAGGACTTCAAAGCTTTAGCG GCGAGGAAATCCCTCAAATTATAATTGCCTATGAACCTATATGGGCCATT GGAACTGGGGAAACAGCTAGCCAAGAGCAGGCCCAAGAAATGCACTCTTT TATTCGTAAATATCTCGCTCAACAATTTAGCGCTGCTGTGGCAGATGAAG TTTCCATTCTTTATGGAGGTTCGGTAAAACCGGCTAATGCCAGAGGTTTA TTTGGTCAGCCCGATATTGATGGTGGCTTAATTGGAGGCGCATCTTTAGA TGCTGAATCCTTTACCGCTCTGATACAAATTGGTGAGGAAATTTTACGAT GA
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Coding sequence (CDS) from alignment at P-littoralis_Contig720:144238..145639-

>mRNA_P-littoralis_Contig720.25.1 ID=mRNA_P-littoralis_Contig720.25.1|Name=mRNA_P-littoralis_Contig720.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=573bp|location=Sequence derived from alignment at P-littoralis_Contig720:144238..145639- (Pylaiella littoralis U1_48)
ATGGCTGCCGAAGAAAACGGTGCCTTTACCGGTGAAATTAGTGCTAGCAT
GGTTAAAGACGCTGGTGCGGAGCTGGTTATAATTGGTCACTCCGAGCGAC
GTGAAATATTTGGGGAATCCGATGCATTATTGGAGCGAAAACTTAAAAAA
GCTCTGGAGCATGGCCTCTACCCTATTTTTTGTGTGGGCGAAAGTTTGAG
TCAGCGAAAAAATAATGAGCATTTCCAGCATATTGAGAACCAGTTAAAAG
CAGGACTTCAAAGCTTTAGCGGCGAGGAAATCCCTCAAATTATAATTGCC
TATGAACCTATATGGGCCATTGGAACTGGGGAAACAGCTAGCCAAGAGCA
GGCCCAAGAAATGCACTCTTTTATTCGTAAATATCTCGCTCAACAATTTA
GCGCTGCTGTGGCAGATGAAGTTTCCATTCTTTATGGAGGTTCGGTAAAA
CCGGCTAATGCCAGAGGTTTATTTGGTCAGCCCGATATTGATGGTGGCTT
AATTGGAGGCGCATCTTTAGATGCTGAATCCTTTACCGCTCTGATACAAA
TTGGTGAGGAAATTTTACGATGA
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