mRNA_P-littoralis_Contig718.10.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig718.10.2
Unique NamemRNA_P-littoralis_Contig718.10.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: D7FWD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD4_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 5.280e-147
Identity = 217/228 (95.18%), Postives = 221/228 (96.93%), Query Frame = 2 
Query:  197 EGQPSVPATLEERSQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 880
            EG PSVPATL+ERSQGRRVIV+LKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYI TTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNP TRHLPPG KT+ GLSVEGTLYNPNHFAA LPDDAP VFYIGAMASGHLTKDE+PEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF
Sbjct:   12 EGPPSVPATLDERSQGRRVIVILKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYILTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPPTRHLPPGSKTF-GLSVEGTLYNPNHFAATLPDDAPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 238
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A836CMU2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU2_9STRA)

HSP 1 Score: 340 bits (871), Expect = 2.760e-112
Identity = 166/222 (74.77%), Postives = 193/222 (86.94%), Query Frame = 2 
Query:  212 VPATLEERSQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            +P TLEE+ +GRRV+VVL RASLETVKT++G+FQLLNCDDH+ L+TKKSGKDP DLRPDIVHQELLALLDSPLNKAG+LQVY+ T   VL+EV+PQ RIPRTFKRFSGLMVQLLHKLKIRAA ++  LL+VVKNPVTRHLP G + Y G+SV GTLYNP  FAAQLP+D P V Y+GAMA GHLT  +HPE+EEMI++SEYPLSGAAAI+R+ G IE+ WGI
Sbjct:    9 LPKTLEEKCEGRRVVVVLWRASLETVKTRRGEFQLLNCDDHKSLITKKSGKDPADLRPDIVHQELLALLDSPLNKAGRLQVYVHTGKGVLVEVSPQTRIPRTFKRFSGLMVQLLHKLKIRAANSNATLLRVVKNPVTRHLPAGARIY-GMSVVGTLYNPRLFAAQLPEDVPIVLYVGAMAQGHLTIADHPEVEEMISVSEYPLSGAAAIARVLGAIESEWGI 229
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A6U0WJW5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WJW5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 5.180e-103
Identity = 159/227 (70.04%), Postives = 189/227 (83.26%), Query Frame = 2 
Query:  197 EGQPSVPATLEERSQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            E + S  +  ++    +RVIVVL +ASLETV+TKKGD+QLLN DDHRR+ T+ + ++P+D RPDI+HQEL+ALLDSPLNKAGKLQVYI+TT NVLIEVNP+ RIPRTFKRFS LMVQLLHKLKIR+A    MLL+V+KNPVTRHLP G   Y GLS  G LYNP+HFA+ LPDDAP VF IGAM++GH+T ++HP IEEMI+ISEYPLSGA AI+RL GGIENHWGI
Sbjct:   70 EAERSTASAADQGGVPQRVIVVLDKASLETVRTKKGDYQLLNADDHRRIATQ-NDRNPRDYRPDILHQELMALLDSPLNKAGKLQVYIKTTANVLIEVNPKTRIPRTFKRFSALMVQLLHKLKIRSADGKDMLLRVIKNPVTRHLPAGAHIY-GLSCTGELYNPHHFASALPDDAPIVFIIGAMSTGHITLNDHPYIEEMISISEYPLSGATAINRLVGGIENHWGI 294
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A7S2WTR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTR9_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.820e-94
Identity = 144/225 (64.00%), Postives = 180/225 (80.00%), Query Frame = 2 
Query:  206 PSVPATLEERSQG-RRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            P+V   +E    G R++IV+L  ASLET KTK+GD++LLNCDDHR++  KK G DP + RPDI+HQELLAL+DSPLNKAG LQVYI T  NVLIEVNP++R+PRTFKRFSGLMVQLLHK KIRA+GNS ML+KV+KNP +RH+P GC+ + G SV+GTLY P+ FA+ +PDD PC+   GAMASG +   +HP IE+M +ISEYPLSGA A++R+ G IE+ WGI
Sbjct:   18 PAVERVVEAAGHGNRKIIVLLTLASLETTKTKRGDYELLNCDDHRQIA-KKYGLDPAEYRPDILHQELLALIDSPLNKAGLLQVYIHTRKNVLIEVNPKMRVPRTFKRFSGLMVQLLHKFKIRASGNSEMLMKVIKNPFSRHIPAGCRCF-GFSVKGTLYKPSSFASLMPDDQPCLLVFGAMASGSIQVQDHPYIEDMASISEYPLSGACALNRICGAIESRWGI 240
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A4D9DCH5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCH5_9STRA)

HSP 1 Score: 288 bits (736), Expect = 5.800e-92
Identity = 145/226 (64.16%), Postives = 179/226 (79.20%), Query Frame = 2 
Query:  203 QPSVPATLEERSQGRRVI-VVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            +P     + E  + + VI VVL +ASLETVK K G + LLNCDDH+ ++ KKSGK+P D RPDI+HQELLALLDSPLNK GKL+VYI+++ NVLIEVN + RIPRT+KRF+GLMVQLLHKLK+R+A     LLKV+KNPVTR+LP G K Y G SV+GTLYNPN  A  LPDD P VF +GAMA+GH+T  +HP IEEM+++S++PLSGA AI+RL G IEN+WGI
Sbjct:    3 EPESSHDVTESLRNKEVITVVLDKASLETVKMKSGQYCLLNCDDHQAMM-KKSGKNPADYRPDILHQELLALLDSPLNKVGKLKVYIRSSSNVLIEVNAKCRIPRTYKRFAGLMVQLLHKLKVRSADGKATLLKVIKNPVTRYLPAGFKCY-GFSVQGTLYNPNALACTLPDDKPVVFVLGAMAAGHITVQDHPYIEEMVSVSDFPLSGATAINRLLGAIENYWGI 226
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A6V1NKS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NKS5_HETAK)

HSP 1 Score: 286 bits (733), Expect = 1.530e-91
Identity = 146/218 (66.97%), Postives = 168/218 (77.06%), Query Frame = 2 
Query:  227 EERSQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 880
            E +S  R  IV+L +A LETVKTK+G F+LLNCDDHR L  K   KDP  LRPDI+HQELLALLDSPLNKAGKL+VYI TT NVLI+VNP IRIPRTFKRF+GLMVQLLHKLKIR+   S  LL+V+K P TRHLP  C TY   SV GTLYNPN FA QLP   PC F IGAMASGH+ +++HP+  E +++SEYPLSGA AI+RL G +E   GIF
Sbjct:   10 ESKSSERPYIVLLDKAVLETVKTKRGTFELLNCDDHRNLAGKIK-KDPATLRPDILHQELLALLDSPLNKAGKLKVYINTTKNVLIDVNPAIRIPRTFKRFAGLMVQLLHKLKIRSTNGSDTLLRVIKAPYTRHLPADCHTYV-FSVTGTLYNPNQFAGQLPAGKPCCFVIGAMASGHIREEDHPQTVEKVSLSEYPLSGATAINRLMGALETQHGIF 225
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A7S3Q0K3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K3_9STRA)

HSP 1 Score: 290 bits (742), Expect = 5.420e-91
Identity = 145/238 (60.92%), Postives = 182/238 (76.47%), Query Frame = 2 
Query:  194 VEGQPSVPATLEERSQGR----RVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAA------QLPDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            +E  PSV +T ++R   +    ++I++L +A LETVK +KG F+LLNCDDHR L  KK  +DPK+ RPDI HQELLAL+DSPLNK+G LQVY +T  NVL+EVNP IRIPRT+KRFSGLMVQLLHK+KI+A   ST L+KV+K P ++HLPPG + Y G+S +GTLY+PN  A       Q  D  P VF IGAMA+GH+T ++HP IE+MI++SEYPLSGAAAISR+ GGIEN WGI
Sbjct:  121 LEIAPSVQSTDQQRKSSQASKQKIIILLDQARLETVKNRKGLFELLNCDDHRDLCKKKLKRDPKEFRPDIAHQELLALIDSPLNKSGSLQVYFRTNKNVLVEVNPSIRIPRTYKRFSGLMVQLLHKMKIKAGNTSTTLMKVIKGPFSQHLPPGARVY-GMSCQGTLYSPNGLATALIPDEQTSDSPPVVFVIGAMAAGHITVEDHPYIEKMISVSEYPLSGAAAISRILGGIENQWGI 357
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BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A7R9W9I7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9I7_9STRA)

HSP 1 Score: 286 bits (732), Expect = 8.640e-91
Identity = 148/242 (61.16%), Postives = 186/242 (76.86%), Query Frame = 2 
Query:  188 TTVEGQPSVPATLEER----SQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQL--PDDA------PCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            T +E  PSV +   ER    S  +++IV+L +A LETVK K+G F+LLNCDDHR L  +K  KDPKD RPDI HQE+LALLDSPLNKAG LQVYI+T  NVLIE+NP IRIPRT+KRFSGL+VQLLHK+KI+A G+S  L+KV+KNP ++HLP G + + G+S +GTLY+PN  AA L  PD +      P  F +GAMA+GH+T ++HP IE+M ++SEYPLSGAAAISR+ GGIEN+WGI
Sbjct:   25 TPLEIAPSVTSLDAERKSTESSKKQIIVLLDQARLETVKNKRGIFELLNCDDHRELCKRKLKKDPKDFRPDICHQEMLALLDSPLNKAGCLQVYIKTCKNVLIEINPSIRIPRTYKRFSGLIVQLLHKMKIKAGGSSETLMKVIKNPFSQHLPAGTRVF-GMSCQGTLYSPNALAAALVPPDPSAASGAPPVCFIVGAMATGHVTVEDHPYIEKMFSVSEYPLSGAAAISRILGGIENYWGI 265
[Close]
BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A6S8XKM1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XKM1_9STRA)

HSP 1 Score: 285 bits (729), Expect = 6.170e-90
Identity = 141/222 (63.51%), Postives = 176/222 (79.28%), Query Frame = 2 
Query:  230 ERSQGRRVIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQL------PDDAPCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            + ++ +++IV+L  A LETVK ++  ++LLNCDDHR L T+K  KDPK  RPDI HQELLAL+DSPLNKAG LQVYI+TT NVL+E++P IRIPRT+KRFSGLMVQLLHK+KI+A+G+ST L+KV+KNP +RHLP G + Y G+SV G LY+P   A  +       DD P  F IGAMA+GH+TKD+HP IEEM ++SEYPLSGAAAISR+ GGIEN WGI
Sbjct:   73 QTARHKKIIVLLDLARLETVKNRRDTYELLNCDDHRDLCTRKLKKDPKQYRPDICHQELLALIDSPLNKAGCLQVYIKTTSNVLVEIHPSIRIPRTYKRFSGLMVQLLHKMKIKASGSSTTLMKVIKNPFSRHLPAGTRVY-GMSVGGKLYSPMSLAQAVLSDDPEGDDPPVCFIIGAMAAGHITKDDHPYIEEMFSVSEYPLSGAAAISRILGGIENRWGI 293
[Close]
BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Match: A0A1E7FLB5_9STRA (Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLB5_9STRA)

HSP 1 Score: 268 bits (684), Expect = 2.730e-84
Identity = 136/217 (62.67%), Postives = 168/217 (77.42%), Query Frame = 2 
Query:  251 VIVVLKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQL----PDDA----PCVFYIGAMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 877
            VIV+L +A+LETVK +KG ++LLNCDDHR L  KK  KDP   RPDI+HQELLALLDSPLNKAG L++YI TT  VLIEVNP IR PRT+KRF+GLMVQLLHK+KI+A  +ST LL+V+KNP++ HLPPG + + G S EG LY+P   A  +    PD      P  F +GAM+SGH+T D+HP IE+M++IS YPLSGAAA+SRL GGIE+HWG+
Sbjct:    1 VIVLLDQATLETVKNRKGLYELLNCDDHRDLCKKKLRKDPNTFRPDILHQELLALLDSPLNKAGLLRIYISTTKKVLIEVNPTIRAPRTYKRFAGLMVQLLHKMKIKAGNDSTTLLQVIKNPLSSHLPPGTRCF-GFSCEGQLYSPIALAKTVVSIEPDTTGKIPPTCFVVGAMSSGHVTIDDHPYIEKMLSISSYPLSGAAALSRLMGGIEHHWGV 216
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig718.10.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD4_ECTSI5.280e-14795.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMU2_9STRA2.760e-11274.77Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A6U0WJW5_9STRA5.180e-10370.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2WTR9_9STRA1.820e-9464.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DCH5_9STRA5.800e-9264.16Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6V1NKS5_HETAK1.530e-9166.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Q0K3_9STRA5.420e-9160.92Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9W9I7_9STRA8.640e-9161.16Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6S8XKM1_9STRA6.170e-9063.51Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7FLB5_9STRA2.730e-8462.67Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig718contigP-littoralis_Contig718:35981..43845 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWD4
Preferred nameEMG1
PFAMsEMG1
Model size1442
Max annot lvl2759|Eukaryota
KEGG koko:K14568
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001510,GO:0001701,GO:0001824,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005856,GO:0005874,GO:0005880,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0006997,GO:0007000,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0015630,GO:0016043,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0017126,GO:0019843,GO:0022613,GO:0030490,GO:0030684,GO:0030686,GO:0031167,GO:0031974,GO:0031981,GO:0032040,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034399,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0042742,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0046483,GO:0048856,GO:0050896,GO:0051704,GO:0051707,GO:0070013,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1990904
Exons8
Evalue1.37e-151
EggNOG OGsCOG1756@1|root,KOG3073@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta knot methyltransferases
Ec32 orthologEc-25_000590.1
EC2.1.1.260
Descriptionribosomal RNA small subunit methyltransferase
Cds size741
COG categoryBK
BRITEko00000,ko00001,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig718.10.2prot_P-littoralis_Contig718.10.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig718 36540..43703 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791493.1147-UTR-P-littoralis_Contig718:35980..365391680791493.1147-UTR-P-littoralis_Contig718:35980..36539Pylaiella littoralis U1_48UTRP-littoralis_Contig718 35981..36539 -
1680791493.2424328-UTR-P-littoralis_Contig718:43703..438451680791493.2424328-UTR-P-littoralis_Contig718:43703..43845Pylaiella littoralis U1_48UTRP-littoralis_Contig718 43704..43845 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791493.136197-CDS-P-littoralis_Contig718:36539..366051680791493.136197-CDS-P-littoralis_Contig718:36539..36605Pylaiella littoralis U1_48CDSP-littoralis_Contig718 36540..36605 -
1680791493.1547408-CDS-P-littoralis_Contig718:36885..369181680791493.1547408-CDS-P-littoralis_Contig718:36885..36918Pylaiella littoralis U1_48CDSP-littoralis_Contig718 36886..36918 -
1680791493.1736536-CDS-P-littoralis_Contig718:37709..378401680791493.1736536-CDS-P-littoralis_Contig718:37709..37840Pylaiella littoralis U1_48CDSP-littoralis_Contig718 37710..37840 -
1680791493.1894681-CDS-P-littoralis_Contig718:38731..388421680791493.1894681-CDS-P-littoralis_Contig718:38731..38842Pylaiella littoralis U1_48CDSP-littoralis_Contig718 38732..38842 -
1680791493.2021527-CDS-P-littoralis_Contig718:39911..400021680791493.2021527-CDS-P-littoralis_Contig718:39911..40002Pylaiella littoralis U1_48CDSP-littoralis_Contig718 39912..40002 -
1680791493.213859-CDS-P-littoralis_Contig718:40555..406061680791493.213859-CDS-P-littoralis_Contig718:40555..40606Pylaiella littoralis U1_48CDSP-littoralis_Contig718 40556..40606 -
1680791493.2234347-CDS-P-littoralis_Contig718:41549..416781680791493.2234347-CDS-P-littoralis_Contig718:41549..41678Pylaiella littoralis U1_48CDSP-littoralis_Contig718 41550..41678 -
1680791493.232966-CDS-P-littoralis_Contig718:43574..437031680791493.232966-CDS-P-littoralis_Contig718:43574..43703Pylaiella littoralis U1_48CDSP-littoralis_Contig718 43575..43703 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig718.10.2

>prot_P-littoralis_Contig718.10.2 ID=prot_P-littoralis_Contig718.10.2|Name=mRNA_P-littoralis_Contig718.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
MSESAGAAAAAAAAATTVEGQPSVPATLEERSQGRRVIVVLKRASLETVK
TKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAG
KLQVYIQTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTM
LLKVVKNPVTRHLPPGCKTYAGLSVEGTLYNPNHFAAQLPDDAPCVFYIG
AMASGHLTKDEHPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF*
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mRNA from alignment at P-littoralis_Contig718:35981..43845-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig718.10.2 ID=mRNA_P-littoralis_Contig718.10.2|Name=mRNA_P-littoralis_Contig718.10.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7865bp|location=Sequence derived from alignment at P-littoralis_Contig718:35981..43845- (Pylaiella littoralis U1_48)
CGCAGGCATTCAGAAGCGCGCACAGTGCCACCAAGTAGGGGATCAAGTAC
ATCCAGACTACGAACATACTTATTGGACTCATTGCCTCCAGGGGAAACAC
TGCAGCGGCTGTGTGTGCGGGTGTGTTCGTATATACAAAACAATGTCGGA
AAGCGCTGGGGCTGCTGCTGCTGCTGCTGCTGCGGCCACCACTGTTGAAG
GTCAACCATCCGTGCCGGCGACCCTCGAGGAGAGGTCCCAAGGGCGACGA
GTGATCGTCGTCTTGAAGCGGGTGAGAGAAATACAGTGGGTATCACGGCG
GTAACGGCGATGCTCTCGCTGGCCGGAGCATGCTGCTGCAGTACCTCTTG
TACGCCCTCGAATCAGCAGGTATAGCATTGCCTGCAACGGAGATCTGCGG
ATCGATTTCGTGTCCTGTGTATCGTCTCTCGTACATACTCGAGTATGATA
TGATACGATGCTAATTACTGTACGTAGTACTTCGAAGAATGAAGTAGTAC
CGGGTTGGCGTACGACGCCGATGAAAAATGAGAACGATGTGCTACGACGA
CGTTGAAAACTCCCTTTTCATTTCCTGCAAAGTGTTCACCTGAATACACT
CAAGGTAGAATGTTCTTTGTTCTGCCGGTTTTCAAGTTGCGACCGGCGGC
CGCCACCGCCGGCGCCTCCAGCGTCTTCGGCGGCCGCGCCTTCACTGGAC
AGGAAAAATAAGCAGATTCAGCAAGCACCATGTCGTACACCTGGGATGCC
ACATCGACCTACAGCAGTATTGCATGCAGAGTACAAGCTTTCAAAGCTGG
CCACATCCAGCGCCTCAAGTGACTCCGGCAGCCGCGCGTTGAACGGATGC
CAACCGCCATGTCTTCCCGTACTAGGGGACCGGCACAACACAACATTGTT
GATTGCGTGCACGTGTTCTTCAAGGCAGCAGTGTAAGCAGTGTAAGAGTA
GCGGAGATTGTGGCGAGCGGCCACCGTCGGCGCCTCTAGCGCTGTCGGCG
GCCACCCTTTGGACGAGGTGCAGCCAGCACCATGTCCTACTGCGCCAGTA
GCCGGTGATGGAATGCCACATCATCGCTACCAACTGGTCTACACAATAAA
ACGTGGTGCACGAAGTACTTCGCATGAAATTTGGATGGCGGCCACCTCCG
GCGCCCCTGGCGGTCGTGCCTTGCGCGGAACACGCATTATCAAGGACCGG
TTGCCCGACAACGTTGCCGATTGGGCCGCAGAAAGCACCGTTAGTTGTGT
AGCCATTGATTACAAGATATGGCAGTTACCGGTAATATTGCCCTATCCCT
GTCTCTGCTGTTTTGGTACGATATATGGCTGCCGACGACGTGTTTCCGAG
GGAGGTTTTCCACATCGTGGATGGATAGGAGGGGATGTTTTTCTGGATAT
GAAACCCGAATACACCTAAGACGGGCATACAGCAGCGCTTTGCTGCCGCT
GTAAAAAAAGTGTTATCAACAATCGACGTGGGAATGATGCTTCACATCAT
GCTTTACGAGTCGTGTCTAGTTGATATCAGCTGGGCCAACTAAATCAACC
TTCAAATAAACACATGAATACATGGCGACGAATCGTGCCCGGAGCTGAGC
GAGGATGCTTGAGATCCCATGAACAACTAACCCGAAATAGGAGGCTCCAG
GCATCCTGAAACTTGGCGAGGCCCTCTCTAGTGTCACAACAGGCGCCCAG
TCGTGTTGTTGGCTGGGTCTTGGGCCGTCTATCGTGTCACCGAGCACGCC
CACTACTGCTGCTACTGCAGTCTACTGCTGTAGCGCGCGGTGTTTGGACA
CCAGTCCAACCGCTCGTAGATACGTTTTGGATGCACCTGGAGTGATGCTG
GGAAAAACAGAGCAGAGCCGGACGCGTGAAAGTGGCGATCTCCGACTGCT
GCACGTGTACCTCGCGGGTAGGCTCGAGAGGATACGTGCCATGTACCCGA
GTACAGGAGTTCCCGTCTGCGCTCACGAACACAACCACGCTCCCGTATTG
CGCCGCCCATTTTACGCTGGGCCAATCACAAAAAAGTGGTGCTTTGTGCG
CCACCTTAACTATATTGTTTCGGCGAACGGCCACAGCTGCTATCTGCGCG
GCACTCTCACCAAAGCCACCCACTCTCCTGCAAACTGCTGTTCTATCCCG
TGCACCACGTGCGCAAGGCTTCGCTGGAGACGGTCAAGACCAAGAAAGGC
GACTTTCAGCTGCTCAACTGCGACGACCACCGTCGGTTGGTCACGAAGAA
ATCTGGCAAAGATCCCAAAGACTTGAGACCAGACATCGTACACCAGGTGA
CAACAACAACAACAACAACGTGGAAAATTGCTTTTCTGATCATGTGGTCT
AACGTTGGCGTGTTTCTTTTCGCATCGCACGTCTTCGATGCCGAACTGTT
GCTCGTTTGTTTTTTTGTTTGCGGAACGTCCGTGATTTTGTCGTAAGGAG
GACACCGTCCTGTGATGTCGCCGCTGACGCTTACTTTGTTCCTTGGTGAG
ACGTTTTTTCGCGTTGATCTGTCGGAAGTAGCACACATTTTCGTGATGCC
ATGTGGACCACAACTTGGCTAGCAGCAGATTGATGGGCTCAACAGCTTCC
CGCGTAGCACTTGCATGTCTCATTCTACATGTTTTTTAAACTGGTCGTCG
CGAATTTCTCCTCAATCGGCATCAAGTGTCTGGGGGGCGTTGGTTGCTCT
GCTCTGCGTCTTGCACAACGTAACTTTCCGGCTCAATGATCTCTCCCCTC
CTCCCCTTGAACATCCCTACCGCAGAATAGTCGGGGTATATGAATCGTGT
GCCACCAGGGGATTTTGTGTGCCTTGTTGTCGTAAGTCCTCTCGCCGTCT
GCGAGTTGTTTGCCGAACGTCGCCATTCGCGTGCGGTTGATCGTGCAAGT
TCGATCGCAAGCATCAAGCGCAGATCTCATCGATCCGCGTTGTTTCGTTA
TTTTTGCGTCACCGCCTACAACACCGCCGTCGCCCTGTTTGCGCATTTCT
GAGTGATGAATCTACATGTATGTTTTGACAAAAAATGCCAGTGCCAGCCA
CCAAAAACTTTGGTCTAACTCGATCTGAACGGGACCCCAAAAAGGGAGGG
GTGTTTGGCTTCGAACTGGACCCGTTGAGCTCACAGCCGTCTGGCATGCG
CGCGTAGTCCCTAATGATTTCGTCGACGTTTTTTTCTTTTCCGTTCCACC
CATTGTTTTTGCCTTTCCTTGTGCGGAACTGCCGTACAGGAGCTCCTCGC
GTTGTTGGATAGCCCGCTCAACAAGGCCGGCAAGCTTCAGGTACGATCAA
TCACGCAGCACGTGTATTGGGCCGTTGTCGTGGCTTTTACGGGAGCCGTA
TCGAATGAGCATGATGATATCATAGCATGCCTTCCGCGCAGCTGTTCCGC
TGAATATTGCAAGCTGTGTTTTTTGCTGCCATCGAACAAATTGCTCCCAT
CATACTACTACAATGCCTATTTTGTCCGGGTTGCGTACATGGAAAATTCA
CATGCCCGGGGGAGCGCATGTAGCTTTTCGCGTTTTCCCAGTTGCTTCCC
GGTAAGCTTTGCTGTAAATCCACGACGCTTTTCGTGTATCCCTTCTCATG
ATGGTACCGCGGTGCCAGAAGCCGTCCCCCTCATCTCTCAACATGCGTAA
TAAGCGAAGTACAGCGCCCAGATATTGGCGGAAGCTCTCTGTTGGCAGCA
AGAAGTTATGTTGCTTCTCACAAGGCATACATGCATACGTGTTCAATGGT
AAAACTACCAAAAAGCCAGAATGAAAAAACTACCTGGTCAAAAAAAGCAA
GAAATTCGTACCCCCCCCCCCCCCTCCTCTCTCTTCCCTCAAGGTTTATA
TTCAAACGACGCTTAACGTGCTCATCGAGGTCAACCCGCAGATTCGAATT
CCCCGAACGTTCAAGCGCTTCTCGGGTCTGATGGGTGAGTAGTCAGACAA
ACGCATACACTGGTTTATTTTGCAGATTTCGTTTACCACGCTGCATCGGC
GTTCTGTTAGGTAAGATCATGGCGGGCATATCGTTCCGTTGTGGTGACGT
TTGTTGGGACGGTCCCGCTGCCAGTCCGGTACGGTCACGCAACCAGTCCG
GGACGGTTGTGCGAACAGTCTGGTACGGTTCCGCCAACAGTCCGGCACGG
TGACGTGAACAGTACGGTACGGTCTCATGTTAATAGTCCAGTACGGTTAC
CTTTAATGTCCGGTACGATTACGCCAACAGTCCGGCGCGGTAACGCCAAC
AGTCCGGTACGGTCACGCTCCCAGTCCTGCACGATTACATAAAATGGTGG
GAAAGATGCGATAGTGGTTTCGATGAAGCGGTCACGTTAAGTACTGCAAG
GTGGATACGTGTAGTTTTTTTCTCGCCATTATGTTTGTTTCTACCGCTTC
AAAAGAAAACGAAGGAGGCAACGAAAAACAAAAAACAAGGCTCGTGTGGT
ATCTACTGTACTTAAAAAAAAGCTCGAATAGAAAAATCTGCTTGTTTTTT
TCTCGATCGTGTTTTGTTCGCTCTCAAATGTCCGAAGTCTTTGAGGTGTT
TCTGCTGTTGCTGCGATCCTCGAAGCTACGAAACGAATAACCGTTCTTGT
CGTGTGGTGTTATAGTTGTGTTGGTCCGAGCATAACTCGCCCTGAAATCC
GCTCAAAATGGACAACGCTAATCGGTACTTGCGTTGCTTCTTCAGGTCTC
CTTTCGTTTTTCAAGGAACAGCAGTTGACCCTCTCGCGTGAGAGCCACTC
TGTTGTTGTTGTTGATGTCTCCAAATTAGGGACCGTTCCGACCTCTATCT
AACACAACCTCTATGTCTCACACTGCTCCAACCTCGCGAGATGCAGACTA
GACTTACGTACTCGTAGACTTCCGTTGTCACAAGCTATCGAACTGTAGAA
AGCTGTTAACCGGATCCCGCCGGATCCCGCCGGAGTGTATCCCTACCTGA
AATCGTTTGCCTCCTGCTTTCAACGTGTCATATCCGAATGAAACCGTCAC
AAGTTCAACTCCTGCACAAGCTCAAGATCCGAGCCGCTGGCAACAGCACG
ATGCTCCTCAAGGTGGTGAAAAACCCCGTGACTCGGCATCTGCCTCCCGG
CTGCAAGACCTACGGTAAGCCGAGTTGAAATCAACACAAATCGATCCAAG
CACAGACGGTTTTGTTTTTGTGGGAATGCTACTGCTGTGTGTGGTATTTG
TCGTGATGATTATCACACTTGGCTCAACGCTAACACTTGGCTCACCGCTA
CCGTCTCGCCCGCGGTCATAAACCAGACATGTGTCGCGTTCGGAGGGAAA
AAAATAACTGTAGTAAAAGAGGGTGAAATGTTTTGATACCCAAAAAGAAA
TCGAAAAACAGGCGTACATGCCGCCAAACCAAGGGGTATCTCGTGCCGTG
GCCAATGTACTGTGTCGGTGCGGGCGTATGGACAGAGCGAAATGTGGGTT
TTCAAGCAAATATCAATAAGCACTTCCATCTGTCTCGGCCCCCTGTCTGT
GTGTTTGCGTTTTTCATTTTTCCCAGCACTGAAAAATAAAAAAATAAAAG
CTTGGAAAATGCATGCTGCAGGAAACGCGATGCCTCTGCTTCTCAAATAC
AAAAAATATATATGATTGAAATTGTTCGCCGGACATATGTAGCCACGATT
GGCGTAGAATTCCGCAGCCGGTAGCCCGTCCTGATCAATCGCAATTGCAG
TTTCAGAGGTAATTCAAAGTGCGCAGCAGTATCATTCCTCCTGCCTGACA
GGGCGCTCGAAAGTAGAAGTACTAGCCCCCCAGACATTGTTCAATGGTGA
GCATCGAACCGGTCGGTTGGGTACTTTGTCACGCACGCAATGTATTGCTT
CGTTTTTTTTCTTTTTATATTCCGACTCCAGTTTCGTGGTTTTATCCTGG
TTTTATCGGAAGTTGGTCGTTCTCTGTCATCACAATCTTATCGGCTTTTT
AATAGTGATCATGCACGTGGTCCTGCACTTTATACCGACCGCAACGGCAC
CCGAGCAGGTCTGTCCGTTGAGGGCACGTTGTACAACCCCAACCACTTCG
CGGCGCAGCTACCGGACGACGCTCCTTGTGTCTTTTACATCGGGGCGATG
GCGTCGGGGCACCTCACGAAAGACGAACACCCCGAGGTAGGAACTTCAAG
CTGGTTTTGCTCCGATGTTTCTTTTTTATTTTTGTTCTGCTGTCATTGGT
TATTGTCGTCACTTTTGAATCATATCTATTTTTTCCATTTACTTGTTTAT
GTACTTTTTTTGTAGCCTGGTGCTCATTGTTGTTGTTGTTGTGGACCTGA
ATTACTTCGTCGGCGCTCATGTCTACCTTTATAGGTTACCCTTTCTATAC
GTCGCTGTAGAGGGTTCCAAGGGAACACGGCCGTATTGGCCCACCACCAG
CGGTGGGCAACTTTTTTCTCGGTAGATCCAACAAGGACAACGTTTGAGTG
GCAAAGGGGGCACCAAAGAGTCAACCATTTGCCCACCGAAAGGAAGAGCC
AGATATCCGCCGGACTACCAGGAGATCATCAGATCTCGACTAGAATTTCC
CGAGATGGTTCGTCTCTCCCCAACTTGTTGGATGTACATACAGTGAGTGT
ATGATTTTGTTAATTTTTCCCCGCTGATGCTGTCATGGCAAGTGCCTGTG
GTAAAACCCCCGCAACAATGATGGCGTCGGTAAATGTTTTCGATCTTGCC
TGTAGCCTTGGTTTTCGCCGTCAGGGCGCCACAACTATCGGAAAAAGTAC
AATTTTATTAATTTTATTCGTGAAATTCGAACATGCAATACTTTCAACTT
GAAGGGATTCGCGCTATAGCGGGAGTGTGCAGCCGAAAGTGCCAGACGTG
TCCCCCTTGACCCCCCCCCCCCCTCCCGTTTGCACCGCGACCGCGTGTCT
TCTTGCGTTTGTGTTTGGTGTTGCCAGATCGAAGAAATGATCGCTATATC
GGAGTATCCGGTAAGCACAGTTTTGGTTGAGCGTTGTAGTGGTGTGGTGC
ACTACATCTTATCATAGGACGGGTTGGTGTACCGGTAGTCTCGACCTTGT
CGATGCTCTTCGGTGTATCCGAGGCCGCGTTGTTGACGACGTTGCCTTTG
TGATGATATGCTGCGTGTGATGGCAGCAAGCCCACAGCAGCCTTCGGAGA
ACGAGAACGAGATGGGTTACACCAATTTACCCCCCCCCCTCCTCACCGTC
TTCCGCACCCTTGCGCGCATGCACCGCCGTCCGCTATCAGCTAAGTGGGG
CCGCTGCGATATCCAGGCTCTTCGGCGGCATCGAGAACCACTGGGGAATC
TTCTGACGTGGTTGTCCTGTAGCGTTCACACGTGCCGTCGCGGTATTCCA
AATATTTTCTTGAGCGATCACCGCTGTACAGGCGAGCGGTGGTATCCTTT
GGAGGACAAAGAGTGTTGGCTCGGTTTGGTTGTGCATGTAAACTCGTCCT
GTGTTCTGCACCTTTATACTAGCAGTATTATTTGTTCCGGCCGCTACATA
GGGTGTTGGGTGTCGTACCGTACGAAGCAGTGAGCAGATTGCCGCGATCG
TGCTCATGGGTTCGCGTGCGAGCGTCACGTTGTTTTTTGTATCTCGCCGG
ATTTCTCGGTTTGGAGTGCTTCCACGGTATAGTCTATAGACAACAGCAAC
ACACAATACAACTACACGTGTCAACAAACATCAAAATACCCCGGTGACCT
TCCTTCCCCTTGCTCGTGCGCCTAACTTATTATGTCGAAGTCCGGAAGAG
GTGGGATGACGACACAAACACCCATATCATAATATGATAACCGCACGCGC
ACACATTACATCGCGAAATATCTGGACGAGAGAGAACATTCCCGGTACAT
AGTCTATGATACCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig718:35981..43845-

>mRNA_P-littoralis_Contig718.10.2 ID=mRNA_P-littoralis_Contig718.10.2|Name=mRNA_P-littoralis_Contig718.10.2|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig718:35981..43845- (Pylaiella littoralis U1_48)
ATGTCGGAAAGCGCTGGGGCTGCTGCTGCTGCTGCTGCTGCGGCCACCAC
TGTTGAAGGTCAACCATCCGTGCCGGCGACCCTCGAGGAGAGGTCCCAAG
GGCGACGAGTGATCGTCGTCTTGAAGCGGGCTTCGCTGGAGACGGTCAAG
ACCAAGAAAGGCGACTTTCAGCTGCTCAACTGCGACGACCACCGTCGGTT
GGTCACGAAGAAATCTGGCAAAGATCCCAAAGACTTGAGACCAGACATCG
TACACCAGGAGCTCCTCGCGTTGTTGGATAGCCCGCTCAACAAGGCCGGC
AAGCTTCAGGTTTATATTCAAACGACGCTTAACGTGCTCATCGAGGTCAA
CCCGCAGATTCGAATTCCCCGAACGTTCAAGCGCTTCTCGGGTCTGATGG
TTCAACTCCTGCACAAGCTCAAGATCCGAGCCGCTGGCAACAGCACGATG
CTCCTCAAGGTGGTGAAAAACCCCGTGACTCGGCATCTGCCTCCCGGCTG
CAAGACCTACGCAGGTCTGTCCGTTGAGGGCACGTTGTACAACCCCAACC
ACTTCGCGGCGCAGCTACCGGACGACGCTCCTTGTGTCTTTTACATCGGG
GCGATGGCGTCGGGGCACCTCACGAAAGACGAACACCCCGAGATCGAAGA
AATGATCGCTATATCGGAGTATCCGCTAAGTGGGGCCGCTGCGATATCCA
GGCTCTTCGGCGGCATCGAGAACCACTGGGGAATCTTCTGA
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