mRNA_P-littoralis_Contig714.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 574 bits (1479), Expect = 1.950e-191 Identity = 322/530 (60.75%), Postives = 364/530 (68.68%), Query Frame = 1
Query: 1 YAALDAYACLLLYDRITELSDPVFRDSDDLSLGDNVRLYTRGGNDCVGEGCIVEYGEETWGTAGFFLGPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVLWDANRLRKTS---TSAAA----------------------------------------------------------TTSPE--------GTAGGAVPGTV--------MGGGEAAFTTPSEPFFAGQLDGIEALSSESVAYSAA----AEEGGYMEQGGKEGDA----------TDKAEV--------ARLVVKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
YAALDAYACLLL+ RI ELSD +FRD+++L +GD VRLYTR GNDCVGEGCIVE+ +ETWGT GF+L PRR TR ARRW VRLD+VHV RAK LYPDA PRG ATAQ+ R SV+LWDA+RLRKT+ T AA T S E G G +P +V G G F TPSEPFF G+LDGIEALSSESVA SA A+EG GG + + T AEV A LVVKLD FHAMQR SKLILKSHGAC AYLARLRDAFFK+NAEDLAAVEAAL QAGMS++EV+ KK K+W YFLKRCRR+IP PAEL++RFDLVN +YGGL+DKKTK+PLFRAEALEA+KRLRVHI+ DCCSD+PN+ALYFEAGKD+ET C ++RC+ GTNDLEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFYDQPMLEAI
Sbjct: 392 YAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRVDSVILWDASRLRKTTAILTVGAAGEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEARTAAXXXXTSSVHVETSTVSCERGGPGGGGGKEGPRLPDSVGEADARRGAGQGGTEFVTPSEPFFCGELDGIEALSSESVACSAGSGGLADEGQAATAGGDDEEEDEVPLDVTADTSSAEVEELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAI 921
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 2.960e-162 Identity = 278/480 (57.92%), Postives = 323/480 (67.29%), Query Frame = 1
Query: 43 RITELSDPVFRDSDDLSLGDNVRLYTRGGNDCVGEGCIVEYGEETWGTAGFFLGPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVLWDANRLRKTSTSAAATTSPEGTAGGA--------------VPGTVMGGGEAA------FTTPSEPFFA---------------GQLDGIEALSSESVAYSA---------------AAEEGGYMEQGGKEGDAT---DKAEVARLV-VKLDAF----HAMQRQ-----SKLILKSHGACGAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
RI ELSD +FRD++++ +GD+VRLYTR GNDCVGEGCIVE+ +ETWGT G +L PRR TRG ARRW V LD+VHV RAKALYPDA RG ATAQ+ R SV+LWDA+RLRK T +P A GA EAA T SE A G +G L+ E A A GG E+ D T AEV L+ +KL A +A+ R SKLILKSHGAC AYLARLRD FFK+NAEDLAAVEAAL QAGMS++EV+ KK K+W FLKRCRR+IP PAEL+KRFD+VN +YGGL+DKKTK+PLFRAEALEA+KRLRVHI+ DCCSDAPN+ALYFEAGKD+ET C ++RC+ GTNDLEG+HLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFYDQP+LEAI
Sbjct: 50 RIGELSDSIFRDAEEMHVGDSVRLYTRAGNDCVGEGCIVEHTDETWGTTGIYLVPRRATRGFARRWAVHLDRVHVPRAKALYPDATDRRGDPATAQLASRVDSVILWDASRLRKM------TATPSAGAAGAPXXXXXXXXXXXXXXXXXXXXXXEAARAPAEEAATSSEHVEASTVSCERSGLRATNGGGKEGAGGLTDERQAXXXXXXXXXXXXXXXXXXATARGGDDEEAEVLLDVTADMSSAEVEELLFLKLKALDQRNYALLRLAAGEVSKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAI 523
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.580e-77 Identity = 118/143 (82.52%), Postives = 135/143 (94.41%), Query Frame = 1
Query: 865 RVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
R+IP PAEL++RFDLVN +YGGL+DKKTK+PLFRAEALEA+KRLRVHI+ DCCSD+PN+ALYFEAGKD+ET C ++RC+ GTNDLEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFYDQPMLEAI
Sbjct: 206 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAI 348
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 248 bits (632), Expect = 1.940e-71 Identity = 168/440 (38.18%), Postives = 228/440 (51.82%), Query Frame = 1
Query: 1 YAALDAYACLLLYDRITELSDPVFRD-SDDLSLGDNVRLYTRGGNDCVGEGCIVEYGEETWGTAGFFLGPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVLWDANRLRKTSTSAAATTSPEGTAGGAVPGTVMGGGEAAFTTPSEPFFAG-------QLDGIEALSSESVAYSAAAEEGGYMEQGGKEGDATDKAEVARLVVKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
YAALDAYA L+++ I DP D L G V ++T+ +CV IVEY E WG P + +R ++LD+V A ++Y + R + + VLWD LR + + A + V + E F TPS+ FF ++ E L ++ S E + + L V+LD FHAM R +K +LKSHGA ++ARLRDAFF I+ +DL V AAL AG+S DE++ KK +WA+FLK C R+IP EL+KR+D V + ++D KT +PLFR+ + V+ LR HI C SD P+ LYF G+ S+ IYRC GTN EGYH HMR LL + SP L HLLLLE N+RWN+R ++ NRGL GGFY Q +L+ I
Sbjct: 229 YAALDAYASRLVHENIVAKRDPRSEPIPDSLQPGTKVFVFTKSDAECVARATIVEYSEPKWG-------PLQLKTASKQRVVIKLDEVLNNSAISMY----RQRLDKDIKPLRELHSQTVLWDIAHLRCETQESLAWMESLAISSDRV----IQSSEQDFITPSDIFFTSIPISRGSVVESDENLFTDENDASDCESEADXXXXXXXXXXXXXRPDGFILKVRLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQG-LPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQSLLDEI 652
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 215 bits (548), Expect = 8.660e-59 Identity = 165/464 (35.56%), Postives = 230/464 (49.57%), Query Frame = 1
Query: 1 YAALDAYACLLLYDRITELSDPVFRDSDDLSLGDNVRLYTRGGNDCVGEGCIVEYGEETWGTAGFFLGPRRTTR-GHARRWTVRLDKV-----HVARAKALYPDADKPRGATATAQIGDRAGSVVLWDANRLRKTSTSAAATTSPEGTAGGAVPGTVMGGGEAAFTTPSEPFF------------AGQLDGIEALSSES-------------VAYSAAAEEGGYMEQGGKEGDATDKAEVARLV-VKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
YA LDAYA +LL+ I + DP+F G+ G E + E WGT LG R TR G +R V++D V KA P D R T + D AG VLWD +R S A + GT + GG A + FF G ++ SES +A S A+ G + + E + V+LD FHA+ R S+ I K HGA +ARLRDA F +N +D+ +E L + GMS +V K ++W+YFL++CRR++PPP+EL+KRFD V + +G VD +K+ L R ++++AV LR HIV C SD A+Y+ GK ++ YRCV GTND+EGYH ++R LL ++C SP LA +LLE N+RWNL+ + NRGL +G Y+Q ++E I
Sbjct: 326 YACLDAYAAVLLHAEIGKFKDPIF--------GEAPSEVPAAGTKTEEEATSLL---EKWGTV-LTLGGRVGTRSGGLQRVVVKVDNALKPSSFVPHDKAPPPAQDGQRRVTVK-DVVDGAG-FVLWDIVHVRLAS------------AHRSFEGTPLPGGAADADAHQDDFFDAPRPAQAVYQNGGDVESDLEADSESDDDTFGESGAGADLASSEASSGGPSASXXXXDAAVASQEEAGDMFFVRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVN-YRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEII 762
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 202 bits (513), Expect = 2.670e-53 Identity = 169/494 (34.21%), Postives = 233/494 (47.17%), Query Frame = 1
Query: 1 YAALDAYACLLLYDRITELSDPVF--RDSDDLSLGDNVRLYTRGGNDCVGEGCIVEYGE-----ETWGTAGFFLGPRRTTR-GHARRWTVRLDKVHVARAKALYPDAD----------KPRGATATAQIGDRAG--SVVLWDANRLRKTSTS--------AAATTSPEGTAGG------AVPGTVMGGGEAAFTTPSEPFFAGQLDGIEALSS-------------ESVAYSAAAEEGGYMEQGGKEGDATDKAEVARLV--VKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDL-------------AAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
YA LDAYA ++L+ I + DP+F SD G VRLYT CVG G + + E WGT L R TR G +R V++ V V + +L P D +PR A + + G VLWD +R S AA+ P+ G+ EP + D ++ ++ A SAA E V V+LD FH + R S++ KSHGA ++ARLRDA F +N +D+ +VE L GM +EV +NW++FL+ RR++P L+KRFD V + +GG VD + + L R +A++AV++LR HI DC SD A+YF GK+ T YRCV GTND+EGYH ++R LL ++C SP LA +LLE NYRWNLR I NRGL A+GG Y+Q ++E+I
Sbjct: 229 YACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWGTD-LKLAQREGTRSGGLKRVVVKV--VDVLKPASLTPHQDAPPXXXXXXGQPRVAVSMNDVHSGKGFEGFVLWDLVHVRLASDHHPFQGIPVPAASADPDAHVDNFFDEPRPAQAVYQNDGDVESALGGEPDGSSDDDTLDESAAGVGAXXXXXXXXXXKGAASAAXXXXXXXXXXXXXXXXXXAPEEPHGVFSVRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHG-LTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESI 718
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 194 bits (492), Expect = 9.930e-53 Identity = 108/224 (48.21%), Postives = 145/224 (64.73%), Query Frame = 1
Query: 634 LVVKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDL---AAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
L V+LD FHA+QR SKL KSHGA ++ARLRDA F +N +D+ +AVE AL GM+ + V K KNW +F++ CRR++P L++RF+LV + + +VD K+ + L R A +AV+ LR HI C SD LY+ +GK+S T RCV GTN EGYH ++R LL +C SP LAH +LLE NYRWN+R ++ NRGL VG F+DQ +E I
Sbjct: 176 LKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNS-AGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEII 398
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 188 bits (477), Expect = 3.030e-49 Identity = 106/224 (47.32%), Postives = 141/224 (62.95%), Query Frame = 1
Query: 634 LVVKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDL---AAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
L V+LD FHA+QR SKL KSHGA ++ARLRDA F +N +D+ +AVE AL GM+ + V K KNW +F++ CRR++P L++RF+LV + + +VD K+ + L R A +AV+ LR HI C SD LY+ TR RCV GTN EGYH ++R LL +C SP LAH +LLE NYRWN+R ++ NRGL VG F+DQ +E I
Sbjct: 176 LKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTKSAGITTR----RCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEII 395
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI) HSP 1 Score: 162 bits (410), Expect = 4.570e-40 Identity = 147/479 (30.69%), Postives = 207/479 (43.22%), Query Frame = 1
Query: 46 ITELSDPVFRDSD-DLSLGDNVRLYTRGGNDCVGEGCIVEYGEETWGTAGFFLGPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQI-------GDRAGSVVLWDANRLR-----KTSTSAAATTSPEGTAGGAVPGTVMGGGEAAFTTPSEPFFAGQLDGIEALSSESVAY---------SAAAEEGGY---MEQGGKEGDATDKA--------------------------------------EVARLVVKLDAFHAMQRQSKLILKSHGACGAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLSEAVGGFYDQPMLEAI 1293
+ + DP+F +L G VRLY+ CVG G + + AG+F G RR +G + V L V A + P A+ ++ GDR +VLWD +R K S +AAA +S E + FT+P P D + + Y S+A + G+ +E GG G A + E L V+LD FHA+QR S+L KSHGA ++ARLRDA F +N +D+ VE AL GM+ + V K KNW YFL+ CRR++P L++RF+ V + +VD K+ + L R +A++AV +LR HI DC SD LY+ G+++ T RCV GTN E NYRWN+R ++ NRGL VG F+DQ +E I
Sbjct: 252 VAKFQDPIFSPPPVELHPGTKVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPGARR--KGRLTQVVVGLSGVFKPAAYTAHKGT--PSAASGVGRVTMDEAYKGDR---LVLWDVAHVRLVSDWKPSPAAAAPSSNENAS------EAYNDNAQFFTSPRPPHVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGFWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDMDDWLGDEQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNA-AGITTRRCVRGTNYTE-------------------------FNYRWNIRMAVKNRGLPREVGEFFDQFEIEII 691
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.040e-37 Identity = 144/438 (32.88%), Postives = 196/438 (44.75%), Query Frame = 1
Query: 1 YAALDAYACLLLYDRITELSDPVFRD--SDDLSLGDNVRLYTRGGNDCVGEGCIVEYGE-----ETWGTAGFFLGPRRTTR-GHARRWTVRLDKVHVARAKALYPDADKPRG-ATATAQIGDRAGSV---------VLWDANRLRKTSTSAAATTSPEGTAGGAVPGTVMGGGEAAFTTPSEPFFAGQLDGIEALSSESVAYSAAAEEGGYMEQGGKEGDATDKAEVARLVVKLDAFHAMQRQSKLILKS------HGAC-GAYLARLRDAFFKINAEDLAAVEAALLQAGMSQDEVDIKKTKNWAYFLKRCRRVIPPPAELVKRFDLVNKVYGGLVDKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPNQALYFEAGKDSETRCTIYRCV*GTNDLEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNR 1239
YA LDAYA +LL+ I DP+F + S+ + G VRLYT CV G + E E WGT LG R TR G RR V+++ AL P + P A AQ G S+ VLWD +R S A + GT + GG A FF DA A+ +H ++ LI ++ H A G A DA +A + VE L GM+ + + K NW++FLKRCRR++PPP+EL+K FD V + +G VD +K+ L R ++++AV+ LR HIV C SD A+Y+ GK ++ YRCV GTND+EGYH L ++ SP LA +LLE N+RWNL+ + NR
Sbjct: 621 YACLDAYAAVLLHTEIGNFKDPIFSEAPSEVPAAGTKVRLYTNNHASCVAVGHVQTEDEASSLLEKWGTV-LTLGGRVGTRSGGLRRVVVKVNN-------ALKPFSFVPHDTAPPPAQHGQGRVSIKDVVAGDGFVLWDLVHVRLAS------------AHRSFEGTPLPGGAADADAYQHDFF----------------------------------DAPRPAQAV--------YHNVRSMQVLIWRAVEQAVEHAASSGGPSASGADA----DAAVASQVEKVLECRGMTPAQAEQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDG-LVRYRCVRGTNDVEGYH-----LASYSASPALAQSVLLEFNFRWNLKMMVKNR 986 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig714.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig714.12.1 >prot_P-littoralis_Contig714.12.1 ID=prot_P-littoralis_Contig714.12.1|Name=mRNA_P-littoralis_Contig714.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp MGGGEAAFTTPSEPFFAGQLDGIEALSSESVAYSAAAEEGGYMEQGGKEGback to top mRNA from alignment at P-littoralis_Contig714:136771..138491- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig714.12.1 ID=mRNA_P-littoralis_Contig714.12.1|Name=mRNA_P-littoralis_Contig714.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1721bp|location=Sequence derived from alignment at P-littoralis_Contig714:136771..138491- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig714:136771..138491- >mRNA_P-littoralis_Contig714.12.1 ID=mRNA_P-littoralis_Contig714.12.1|Name=mRNA_P-littoralis_Contig714.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig714:136771..138491- (Pylaiella littoralis U1_48)back to top |