mRNA_P-littoralis_Contig712.24.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig712.24.2
Unique NamemRNA_P-littoralis_Contig712.24.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 4.860e-110
Identity = 215/410 (52.44%), Postives = 249/410 (60.73%), Query Frame = 1 
Query:   73 MDGLPLDVILLVSVGLVAAVSLVAYISRKMLSNNQ--EGRPTGGEDASGSGNASS-GRLARHPGGECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAA---------------------------AAVASAPSGEATSPAAAAVPGEGSSTSSQMGAGLAAXXXXXXXXXXTFAGASXXXXXXXXXXXXVVTAASVD--SSSNARATPPLAGDW 1206
            M+GLPLDVILLVS+G+VA  SLV YISRK+ SN++  EG  TG     GS N ++ GRLARHPGGECPICLS+EVETP+QTNCGHWFCARCIL YYD  GRVRI+CP+CRQEVTMLHG A D   A                     +  A    AATT               GSPE Q++I+RFN+RNSGR RSPWQVIEDAPLLLRRLW+DL RGDT+VFG L+RRGVQLQLFVAALYILSP+DV+PE L+GIAGL+DDL+VV+ LLLH+T+VYRT+LL+WERSR AR                              AAVAS               GEG   +S  GAG+AA            AG                 AA+ +   S   R  PPLAGDW
Sbjct:    1 MEGLPLDVILLVSIGIVAVTSLVVYISRKLTSNDEDEEGAATG---IDGSNNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAA--------------GDTDQAHDARAESAPAATT---------------GSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVAS---------------GEGRFDNSPQGAGIAAVLALLVGALLALAGGGEGQTALGAGAMGAAVAAAAERYGSRAPRVMPPLAGDW 363
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: D7FX72_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX72_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.610e-57
Identity = 136/287 (47.39%), Postives = 160/287 (55.75%), Query Frame = 1 
Query:  385 LCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAAAAVASAPSGEATS-----------PAAAAVPGEGSSTSSQMGAGLAAXXXXXXXXXXTFAGASXXXXXXXXXXXXVVTAASVD--SSSNARATPPLAGDW 1206
            +CRQEVTML+G A D   A                     +  AG   A TT               GSPE Q++I+RFN+RNSGR RSPWQVIEDAPLLLRRLW+DL RGDT+VFG L+RRGVQLQLFVAALYILSP+DV+PE L+GIAGL+DDL+VV+ LLLH+T+VYRT+LL+WERSR AR                           P AA   GEG   +S  GAG+AA            AG                 AA+ +   S   RA PPLAGDW
Sbjct:    1 MCRQEVTMLYGAAGDAQAA--------------GDTDEAHDARAGSAPATTT---------------GSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAVASGEGRFDNSPQGAGMAAVLALMVGALLALAGGGEGQTAMAAGAMGAAVAAAAERYGSRAPRAMPPLAGDW 258
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A2Z7CY40_9LAMI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CY40_9LAMI)

HSP 1 Score: 113 bits (283), Expect = 3.580e-25
Identity = 74/217 (34.10%), Postives = 105/217 (48.39%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 909
            C IC S     P Q NC HWFC  CIL  ++ G      KCPLCR+E+T+L                              SE ++ +     T                  E    I R+N +   R     Q ++D P LLRRL  D+R    +    +IR  V L + V+A+Y+LSPVD++PEGLLG+ GL+DDLI+V++ +LH+ ++YR +LL
Sbjct:   10 CSICHS-NFNIPCQANCSHWFCGGCILQVWEHGAALHPCKCPLCRREITLL----------------------------VPSEASSRQSHMVNTA-----------------EILRSIERYNRQYGERSNGVMQRVQDLPFLLRRLLRDIR-DPQRTLPVVIRARVYLAMVVSAIYVLSPVDIIPEGLLGVIGLLDDLIIVLICVLHVASLYRAVLL 179
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI0020095D38 (E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Salvia TaxID=21880 RepID=UPI0020095D38)

HSP 1 Score: 105 bits (263), Expect = 1.540e-22
Identity = 74/217 (34.10%), Postives = 101/217 (46.54%), Query Frame = 1 
Query:  259 ECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR-IKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 906
            EC IC     + P Q NCGHWFC RCIL  +D    +R  KCPLCR+E+T+L                              SE      GA                     E   +I  +N +      S  Q + D P LLRRL  D+     +    ++R  V L + ++A+Y+LSPVD++PE LLGI GL+DDLIVV +  L++  +YRT+L
Sbjct:    9 ECSICQQ-NFQIPCQANCGHWFCGRCILQVWDFGHALRPCKCPLCRREITLL----------------------------VPSEAHRTADGA---------------------EILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIM-DPQRALPLVVRARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVL 174
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A834X1P6_9FABA (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X1P6_9FABA)

HSP 1 Score: 105 bits (261), Expect = 3.180e-22
Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCI-LDYYDGVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 906
            C +C      TP Q NC HWFC  CI L ++ G      KCPLCR+++T+L          PT                   E + G+              P VA  LG+ ET      +N    GR     Q ++D P LLRRL  +L     +    +IR  V + + ++A+YI+SPVD++PEG+LGI GL+DDL++V++  LH+  +YR++L
Sbjct:   10 CSVCHG-SFTTPCQANCSHWFCGNCIMLVWHHGSAVQPCKCPLCRRQITLL---------VPT-------------------EDSLGQ-----------RHDPEVARVLGNIET------YNRLFGGRETGLVQRMQDLPFLLRRLLRELM-DPHRTLPLVIRARVYIAMILSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAALYRSVL 178
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI001FB083FF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB083FF)

HSP 1 Score: 104 bits (259), Expect = 5.900e-22
Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 906
            C IC +    TP Q NC HWFC RCIL  +D G      KCPLCR+E+T+L                              S  ++ E  ++                    E   +I R+N     +  S  Q ++D P LLRRL  DL      +   ++R  V L + V+ +YI+SPVD++PEG+LGI GL+DD I+ ++  LH+  +YR+ L
Sbjct:   10 CSICHN-NFTTPCQANCSHWFCGRCILQVWDHGSSFQPCKCPLCRREITLL----------------------------IPSRASSNECNSSEVA-----------------EVFGRIERYNRHFGQQTNSLVQRMQDLPFLLRRLTRDLMNPQRSL-PFVLRMRVYLAMLVSVIYIISPVDIIPEGILGIIGLLDDAIIALICFLHVAALYRSAL 178
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A5B7BU90_DAVIN (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BU90_DAVIN)

HSP 1 Score: 103 bits (256), Expect = 1.490e-21
Identity = 72/221 (32.58%), Postives = 107/221 (48.42%), Query Frame = 1 
Query:  250 PGGECPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 909
            PG +C          P Q NC HWFC  CIL  ++ G      +CPLCR+++T+L                              SE ++ +              P VA  LG  ET ++   F ER  G      Q +ED P LLRRL  +L      +   ++R  + L + V+A+YI+SPVD++PEG+LGI GL+DD+I+ ++  LH+  +YR++LL
Sbjct:    5 PGNDCCSICHGNFHIPCQANCSHWFCGNCILQVWNHGSVLQPCRCPLCRRQITLL----------------------------IPSEASSQQ-----------RQNPEVAETLGKVETYNRY--FGERADGL----IQRLEDLPFLLRRLLRELMDPQRSL-PLVLRARIYLAMAVSAIYIVSPVDIIPEGVLGIIGLLDDIIIALICFLHVAALYRSVLL 179
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A1S3YLS3_TOBAC (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YLS3_TOBAC)

HSP 1 Score: 103 bits (256), Expect = 1.490e-21
Identity = 71/217 (32.72%), Postives = 102/217 (47.00%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 909
            C IC       P Q+NC HWFCA CIL  +D G      KCPLCR+ +T+L                              S++A+                P V      PE   +I  +N        S +Q + D P LLRRL  D+      +   +IR  V L + ++ +Y+LSPVD++PEG+LGI GL+DDLI++ +  LH+  +YR++LL
Sbjct:   10 CSICHG-NFHVPCQSNCSHWFCANCILQVWDHGSALQACKCPLCRRPITLL----------------------------VPSDSAS-----------RLHRDPVV------PEVLRRIEHYNRHFGQHNSSLFQRVRDLPFLLRRLLRDMTDPQRSL-PFVIRARVYLAVILSGIYVLSPVDIIPEGILGIIGLLDDLIIMFICFLHVAALYRSVLL 179
[Close]
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A0K9RRI5_SPIOL (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RRI5_SPIOL)

HSP 1 Score: 103 bits (256), Expect = 1.530e-21
Identity = 69/216 (31.94%), Postives = 101/216 (46.76%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR-IKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 906
            C IC     + P Q NC HWFC RCIL  +D    ++  +CPLCR+ + +L                                         T         P VA  LG      ++  +N R   R     Q + D P LLRRL  DL      +   +I+  + L +F +A+Y+LSPVD++PEG+LG+ GLVDDLI+V++ L+H+  +YR++L
Sbjct:   12 CTICHD-NFDIPCQANCSHWFCGRCILQVWDHAAALQPCRCPLCRRPINLL---------------------------------------IPTEASQQQRVNPEVANILG------RLEMYNRRYGERASDFMQRLRDLPFLLRRLLNDLLDPHRSL-PFVIKARIYLAVFFSAIYVLSPVDIIPEGVLGVIGLVDDLILVLICLVHVAALYRSVL 180
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BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI00103644AE (E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103644AE)

HSP 1 Score: 102 bits (254), Expect = 2.760e-21
Identity = 71/217 (32.72%), Postives = 107/217 (49.31%), Query Frame = 1 
Query:  262 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 909
            C IC       P Q NC HWFC  CIL  ++ G      KCPLCR+++T+L  +  D +                        + A E+                   LG  E  ++   F ER++G      Q + D P LLRRL+ D+ +    +   +IR  V L +FV+A+YI+SPVD++PEG+LGI GL DD+++ ++  LH+  +YR++LL
Sbjct:   10 CSICHG-SFNLPCQANCSHWFCGNCILQVWNYGSALQPCKCPLCRRQITLL--IPSDAS------------------SRQRHNSDAAEI-------------------LGKIERYNRY--FGERSNGL----IQRLRDLPFLLRRLFRDIMQPQRSL-PLVIRARVYLAMFVSAIYIISPVDIIPEGILGIIGLFDDVLIALICFLHVAALYRSVLL 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE4.860e-11052.44E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
D7FX72_ECTSI1.610e-5747.39RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A2Z7CY40_9LAMI3.580e-2534.10E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoce... [more]
UPI0020095D381.540e-2234.10E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Sa... [more]
A0A834X1P6_9FABA3.180e-2233.80E3 ubiquitin-protein ligase RNF170 n=1 Tax=Senna t... [more]
UPI001FB083FF5.900e-2232.41E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatie... [more]
A0A5B7BU90_DAVIN1.490e-2132.58E3 ubiquitin-protein ligase RNF170 n=1 Tax=Davidia... [more]
A0A1S3YLS3_TOBAC1.490e-2132.72E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotia... [more]
A0A0K9RRI5_SPIOL1.530e-2131.94E3 ubiquitin-protein ligase RNF170 n=1 Tax=Spinaci... [more]
UPI00103644AE2.760e-2132.72E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig712contigP-littoralis_Contig712:107722..113643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX72
Model size2459
Max annot lvl2880.D7FX72|-
Hectar predicted targeting categorysignal peptide
Exons5
Evalue4.37e-62
EggNOG OGsKOG2164@1|root,KOG2164@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-10_004530.1
Descriptionubiquitin-like protein transferase activity
Cds size1137
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig712.24.2prot_P-littoralis_Contig712.24.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig712 108972..113571 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791487.575007-UTR-P-littoralis_Contig712:107721..1089711680791487.575007-UTR-P-littoralis_Contig712:107721..108971Pylaiella littoralis U1_48UTRP-littoralis_Contig712 107722..108971 -
1680791487.647548-UTR-P-littoralis_Contig712:113571..1136431680791487.647548-UTR-P-littoralis_Contig712:113571..113643Pylaiella littoralis U1_48UTRP-littoralis_Contig712 113572..113643 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791487.5866113-CDS-P-littoralis_Contig712:108971..1093821680791487.5866113-CDS-P-littoralis_Contig712:108971..109382Pylaiella littoralis U1_48CDSP-littoralis_Contig712 108972..109382 -
1680791487.601846-CDS-P-littoralis_Contig712:109957..1103561680791487.601846-CDS-P-littoralis_Contig712:109957..110356Pylaiella littoralis U1_48CDSP-littoralis_Contig712 109958..110356 -
1680791487.6111639-CDS-P-littoralis_Contig712:111793..1118601680791487.6111639-CDS-P-littoralis_Contig712:111793..111860Pylaiella littoralis U1_48CDSP-littoralis_Contig712 111794..111860 -
1680791487.6204076-CDS-P-littoralis_Contig712:112465..1126201680791487.6204076-CDS-P-littoralis_Contig712:112465..112620Pylaiella littoralis U1_48CDSP-littoralis_Contig712 112466..112620 -
1680791487.636302-CDS-P-littoralis_Contig712:113466..1135711680791487.636302-CDS-P-littoralis_Contig712:113466..113571Pylaiella littoralis U1_48CDSP-littoralis_Contig712 113467..113571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig712.24.2

>prot_P-littoralis_Contig712.24.2 ID=prot_P-littoralis_Contig712.24.2|Name=mRNA_P-littoralis_Contig712.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=379bp
MDGLPLDVILLVSVGLVAAVSLVAYISRKMLSNNQEGRPTGGEDASGSGN
ASSGRLARHPGGECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR
IKCPLCRQEVTMLHGVAEDVAVAPTAPVAAAAAAAAAAAAAAASETAAGE
VGAATTVPLAAPAAPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIED
APLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGL
LGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAAAAVASAPSG
EATSPAAAAVPGEGSSTSSQMGAGLAAAGAVAAGSIATFAGASSGVASLT
AVAVGVVTAASVDSSSNARATPPLAGDW*
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mRNA from alignment at P-littoralis_Contig712:107722..113643-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig712.24.2 ID=mRNA_P-littoralis_Contig712.24.2|Name=mRNA_P-littoralis_Contig712.24.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5922bp|location=Sequence derived from alignment at P-littoralis_Contig712:107722..113643- (Pylaiella littoralis U1_48)
GGCAGCAGCGACAGAGTATCTGGCATCTCGTCGTCTACCACACTCGTTAA
ATAGGAGGGATCGCCCTTGAAGATGGACGGGCTCCCGCTAGATGTCATCC
TGCTTGTGTCAGTCGGGCTCGTGGCTGCGGTTTCGCTTGTGGCCTACATC
TCGAGGAAGATGCTTTCCAATAATCAGGTGAGATACATGTGATGTATTAT
TTGTAGCCGCACCGATAATTTGAAAAATTACTCTGCCTCTCTGCCTCTTT
CTCCGTTTATCGTGTCTTCTCTTCCTCTTCTCTACTGCTTTACAAGCACA
GCTCCCTCTCTCCTTCTTACCCCGCGGAATACAACAAGGCACGGACCGCC
CGCCGTACACGGGCAGCTGTTATGCATATTTGAGGTGCACAAAGCAAGGA
TATGTGTTTGTCCTCAACAGCAGATAACCACTGTTGCTTCAAAGCATCAA
ACATATACCAGGTATTCAACTACCGTAAACCTGCTGTGATATAGCTCCAC
CCGGCGCAGTTAGGGATGCTCCCTCGTGGATCTCACGTGACTTTTCAAGT
TGTTCAACACACGCCAACGTCATCTCCTCTTGGACTGCCGTCCATATCGT
GTATAGCAGCAGTAGTCCATGCGCACCAACGCGGCAGTCAAACGAAGGCG
GAGAAATTCGCGCACAAGTTTTGGGCTCGATGTCGACACCGATGATGAGC
TGCTGTAAACATACCTCGAAGTTGCACACTTTTTTTGAACAGCGATAGCG
AGTTGAACACGTGTGCGGCCCCACGTGCGCGCCTCTTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTTCTCT
TCCTCGATGTGTACGATATGTATCCCGGTTCGAGTGAAAATTGGAATATA
TTGTGAACTTGCTCAAGCTGGCACATCTCTCGAAAATCAAATGGAACGGC
ACGAACACGACGAAATGACGGAAGTGCCACACATTTGCATTCATTTCGCA
CAAACGCCGCGCCCGCGCCGCAGGAAGGAAGACCCACCGGTGGCGAAGAC
GCAAGCGGGTCCGGCAATGCATCTTCGGGCAGATTAGCCAGGCACCCCGG
CGGAGAGTGTCCGATATGCCTCTCGGTAGAGGTGGAAACCCCGCTGCAGA
CGAACTGCGGGCACTGGTTTTGTGCCAGGTGGGCCGAAGAGTCCGTTCTT
GTCGTCCTGGGCCAGTGGGCGTTGCACCTAGGCTGTGCCTCGGTGTGATT
GGCTGTGCACATGTGGACACGCGCCTGCGCTGCGCCTGCATCTCAACGGA
CTACTTCGTACCGTACATGATAATGTGATCTCACAGTCAAAAAGTTTTTT
CCCCTCAGGGAGATCGGCTTTATCTGCCCGCAGTTACGTACGACTGTCAC
TGATTCCTCGCTTTGTGTGGTCGGCTGATTTTTTTTTCATTCGACGGGGT
GGTCATCGACCATCGACCAGCAAGGTCCACAACAGCAGTCGTGCAACCAT
GCATGATTCATGGTTCATGCTGATTCTGGTCGTTTTCGTTTTGTCCTCGT
GTGCGCTGAAACAGCGTTCGACGTTCGGCTGCATGTTTTTGGGGGCGGAC
TGGTCCTCTTGCACGCGTGCATCCCGACTGCTGCCGACCCCGGGCAGAAC
TCGTACGAGAACCTACGGCAGTTTTCATTTTCGGATTTTTTTTATACATA
GCCGCCCAGCGAAGTTTTGCAACGAAACGACCTGACTGCGTATGTAAATA
CCACTTCGCATACGTATCTACCCTTTGACGCAGGTGCATTCTGGACTACT
ACGATGGCGTGGGCAGGGTGCGGATTAAGTGCCCATTGTGCCGCCAGGAG
GTGAGTCGATACGATACGGCACCCGGTCACGCCCCTGCACAGCAAAAGAA
ACTGTTTGTCGACCTCGCCGTGACTTGTATGCGATGGTCGATCCTCGCCA
TGTAGCGGTATGGACGATCGGCATTACACACCAGCAGCTTTTTACAGGCC
CGTGGCGTCTGTCTGTTTGCACTGGGAAAGCCCCGACCGGCTGGCTGCCG
GTCGAAGCGTGCGGCACTAACCCTTCTGGGACCAGGGTGTTTTGTTCCTT
TTCACACGAACAGCCCGGGTTCCAAATGAGAACCATACGATGTTCCCCCG
AGAAAAGTCAATATGGCTCAAATGTCCCTGTCAAATGTACAGCAGGCACG
AAACCAAGAGAAAATATGCACATCAGAACCACAAGATATACAGCCAGGGC
CCCTGACGGGGGGCTCACATTTGGCTGGTTTCGTCCCTGGAGAGTACAGA
AGGGATACCCGGTGGTCGAGATGCCGCGGCTAGCTCTCAGGCGTCGTGCA
ACGTGTTCTAACCATCATTAGCGCTTAAAGTATCCAGTCCCCTCAAAACA
AAATAATAAGGAAAAAGAAGTTGCTGCTAAGTTACTCGTTTCCCGCTGTA
GCTCCCGGCCTGCTAAATACACTTTAGAGTGGGGGCCCCGTGGCCTGCGG
CCGGCCTGAAGGTCCGTCCTTCCTTCTCGCATATAGATAGCGACAGGTAC
ATCTTTGATACTAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCAGTAATAG
TTTTCTATAGCAACCAATGGCATGTATCTGCTGTTGCTGCTGCTGTTGCT
GCTGCCGTTGTCTCTGGGTTGACCAAACAAGATAATAATATACCATCATC
TCTACAGGATGTATCATACATAAGAGGTATGAATATTCTACTACTACTGC
TCTTGCTTGTTATGTGATACCGACGAGGGAGGAGGTATCATATGGCATGT
GATGTACTGCTGTAAAGTAGTAGCAGTTGTAGTAGGAGTAGTGCTGCTAT
AATGCTGGTGTGGTGTTGCACTCCAGAAAAATATGATACTGCGAAGTGTA
TGCTGATGATACTAGACACTACTGATGATGCTACTCTGTCAGACGAAATG
ATTTCAGATTTCGACTGCCGGGGATTTATTATGTTGACTGAGTCTTGGGC
ACCCTCACACCCATTGACTACACACACACACAGCAGCAGCAGTGAGCGGT
GTTTGTTTGCCCTCTTGCCCGTATCTGAATGCAGCCGGAATGCTGCTCAA
CTCCCAACGTGATGGGGATCGGAATTTTTTGTTTCTGTCCCCGTCCCGAA
GAAACCGGCCAAACAAAAAATAAAAAAAGGATTTATAATTTTTGATCAAT
AAATCGCCTAGAAGTTACAGAAGGGTTAATGAGTATCTCTTGCGTTGAGC
CAATCCCGCCCGCGCGTGTGATGACGCCCGTCGTCAGGTGACCATGCTGC
ACGGAGTGGCCGAAGACGTGGCGGTGGCGCCTACAGCTCCAGTCGCCGCC
GCCGCCGCCGCCGCCGCTGCCGCCGCTGCTGCTGCAGCTTCAGAAACAGC
AGCAGGAGAAGTGGGGGCGGCAACGACCGTGCCTCTGGCAGCACCTGCAG
CGCCGGCAGTAGCAACGCCGTTGGGCTCGCCGGAGACCCAGGATCAAATA
GCTAGATTCAACGAACGGAACTCGGGGAGGCGACGGTCGCCGTGGCAGGT
CATCGAGGACGCCCCGCTTCTCCTTCGGCGGCTGTGGGCCGACCTGAGGC
GTGGGGACACTCAGGTTTTCGGCGCGTTGATCCGGAGAGGGGTGCAGCTG
CAGCTCTTCGTGGCGGCGTTGTACATTCTCAGCCCGGTAAGTTGGATTTT
GTAGAAAGCGCTGAGGGGGCCTGAAGCTATGCTCCTCATCATCGACGGTA
TTTTGAGTGCGTGTAACACCCTTTCTTCCTTCAGTTTGCGCCTATGCTTC
CTTGCGTTCTCAACCATCTTGTCTGTAGCTTTGACCCACCTGCTCGTCAA
CCATTGTCAGCCCTGGCTGAGTAGCTTGGTGGCTGTGCTATCAGAAGACG
TGGCCGTGCGAGTTCGGTCCGAGCACCGATCAACGCCAATAAACCCGTAT
TCTCTGAGCCGGTCCCGTCGCAAAATGCTGCTGATCATACATCAGTCACT
GTCCGGCTTCGCGAAGAAACAATCGACGAACCATCGGCATGCTGAGATTT
GAATCTACGGACTTTATAGTCTGTAACTTCGCACTGATCGTGCAACTGCC
GTGCTACTTCTGAGTCAGCGTTAGCACTCTGGAGCACAGAAATCACTCGA
CAAACCGCACCCTTTTTTTCGTCCCAAAGGGTATCTGAAAAGCTATACAC
GTCCACGATCACTCCAGTCCCGCCCCGCGCCTCCACGCCCCTTGTGGTTC
AAATGTGCCAGGTGGACGTCATGCCCGAGGGCTTGCTAGGCATTGCTGGC
CTCGTTGACGATCTGATTGTCGTGATCGTCCTGCTCCTGCACATCACCAC
GGTGTACCGGACGATATTGCTCACGTGGGAACGATCGAGAATTGCGCGCA
CAGCAGCTGCCGCCGTGGCAAGCGCTCCAAGCGGCGAAGCCACCTCGCCG
GCGGCGGCGGCGGTGCCCGGAGAAGGGAGCTCGACCAGTTCCCAAATGGG
AGCCGGGTTAGCGGCGGCGGGCGCCGTAGCGGCGGGATCGATCGCAACGT
TTGCTGGGGCTAGCTCAGGGGTTGCATCGCTTACAGCGGTGGCAGTGGGA
GTCGTGACAGCGGCGTCGGTGGACTCTTCGTCGAATGCACGGGCGACGCC
TCCGTTGGCTGGGGATTGGTAGACCTTTGATACGCAGCTCTTCTTTTACG
TCTGCGCACTCGGTTTTTGAGATGGCAGCATTTTTTGTGTGCGTGGTGAG
CGTTGAGTCTGCGTGTCGTGGGGAGCGCGCCGAAGCATGTTTGCGTGGCC
TCGTACCAAGGGAGCTGTCCGCGGAACAACGAGAACTCCTCGGTTTCTTG
TGGACGCGTCGTTTAGTCTTAAGGGCAACCGTGCGCTCCGAGCCGCTGCT
GTGCTGTACATATGAGGCCTAGAGGATTGCCTCACTTGTCGTCCACCCAG
GTGCATCTTGAGCTGTCGCAGTGGCACCCGTCCGATCAATTGGACCCTCT
GCCAGATGAGGGGTGGTATCCAAATATCCGGTGCACCTGCCCTCGTGATA
TTTCTTCATGCTCCTGAGCTGCTCGTGAAAGGAGGTGACTGCGGAATGGT
GGGAATTTTGTTTGTTTTTCCGTCTTTTTACAAGTAACGCGCTTATATAT
TTTGATGCGGGGACTTCGTTGCGTAGGTGGGAAAAAATATGACGCTAGAA
TCGGGGGGCAACTAAGATCCCTGAGGTGGGTTAGAACCGACGGATGCCCT
TGGAACAAGTGACAATAGTACAGCACAGCACAGCACAGGCTTCTGGCATG
TTTTTTAGACCCAAGGGCAGCCACCGAGCCACTGTCGGAGACCCTGGTAC
CCTTCCCCCGGCAACCCAGTATCATAGGATTTCCCCTCTGGTTCCAGGGC
AACCGTCGATTATCGGCGTTTAAATGCGCGGAGGTTCTTCGGGAGATGTC
ACGCGGAAGCTTCCGCTACAGGAAGTGGTTGCCTTTGGAACGAAATCAAG
TGTCTTATAAGTGCATCTTAAATGCTTTCGAAAAGGCGAGGACACGCCCG
GATAGATACTTGTGGGACGGCAGGCGCGAGGGAAGCTAAGGGGGGGTACC
TGAGCCTCGATGAGTGATGACAAATGGTGGGCAGTTGGAGACACAGAACG
ACGTGAGCGTGAAACGGAAACTGCTGCTGTGTGTTGCTGAGAGTACGCCC
CCTCAAGCCAGCTACTTGAGACACCCACGGAGGGGGGTGACGATAGACAT
CAAAATCCGGAAATTTCGCAGGGAACTTTGCTTTCCCCTAAGAGATGAAA
GGTGCCCGTGGATAACGTCACCGGTCGACCACGGATTTTGGGCCAATCGG
ATATCTCCTTTCAAAAAAATTGGCCAATCAGAAAACTGCGGGTACCTTTT
CTCTCTCTCTTTTTGTTGCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig712:107722..113643-

>mRNA_P-littoralis_Contig712.24.2 ID=mRNA_P-littoralis_Contig712.24.2|Name=mRNA_P-littoralis_Contig712.24.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1137bp|location=Sequence derived from alignment at P-littoralis_Contig712:107722..113643- (Pylaiella littoralis U1_48)
ATGGACGGGCTCCCGCTAGATGTCATCCTGCTTGTGTCAGTCGGGCTCGT
GGCTGCGGTTTCGCTTGTGGCCTACATCTCGAGGAAGATGCTTTCCAATA
ATCAGGAAGGAAGACCCACCGGTGGCGAAGACGCAAGCGGGTCCGGCAAT
GCATCTTCGGGCAGATTAGCCAGGCACCCCGGCGGAGAGTGTCCGATATG
CCTCTCGGTAGAGGTGGAAACCCCGCTGCAGACGAACTGCGGGCACTGGT
TTTGTGCCAGGTGCATTCTGGACTACTACGATGGCGTGGGCAGGGTGCGG
ATTAAGTGCCCATTGTGCCGCCAGGAGGTGACCATGCTGCACGGAGTGGC
CGAAGACGTGGCGGTGGCGCCTACAGCTCCAGTCGCCGCCGCCGCCGCCG
CCGCCGCTGCCGCCGCTGCTGCTGCAGCTTCAGAAACAGCAGCAGGAGAA
GTGGGGGCGGCAACGACCGTGCCTCTGGCAGCACCTGCAGCGCCGGCAGT
AGCAACGCCGTTGGGCTCGCCGGAGACCCAGGATCAAATAGCTAGATTCA
ACGAACGGAACTCGGGGAGGCGACGGTCGCCGTGGCAGGTCATCGAGGAC
GCCCCGCTTCTCCTTCGGCGGCTGTGGGCCGACCTGAGGCGTGGGGACAC
TCAGGTTTTCGGCGCGTTGATCCGGAGAGGGGTGCAGCTGCAGCTCTTCG
TGGCGGCGTTGTACATTCTCAGCCCGGTGGACGTCATGCCCGAGGGCTTG
CTAGGCATTGCTGGCCTCGTTGACGATCTGATTGTCGTGATCGTCCTGCT
CCTGCACATCACCACGGTGTACCGGACGATATTGCTCACGTGGGAACGAT
CGAGAATTGCGCGCACAGCAGCTGCCGCCGTGGCAAGCGCTCCAAGCGGC
GAAGCCACCTCGCCGGCGGCGGCGGCGGTGCCCGGAGAAGGGAGCTCGAC
CAGTTCCCAAATGGGAGCCGGGTTAGCGGCGGCGGGCGCCGTAGCGGCGG
GATCGATCGCAACGTTTGCTGGGGCTAGCTCAGGGGTTGCATCGCTTACA
GCGGTGGCAGTGGGAGTCGTGACAGCGGCGTCGGTGGACTCTTCGTCGAA
TGCACGGGCGACGCCTCCGTTGGCTGGGGATTGGTAG
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