prot_P-littoralis_Contig71.122.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig71.122.1
Unique Nameprot_P-littoralis_Contig71.122.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length318
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig71.122.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.400e-35
Identity = 89/210 (42.38%), Postives = 117/210 (55.71%), Query Frame = 0 
Query:    1 MKIDQIFSRLALGVKGLNVFTRSEQVAIIKASYKAVPMNVSTLRNEGNFKDFLMGRYKMIPSITRWWAFLLLRS-EGNVGVCVKEFMRSRDWSGPTRDGKSRAGTPPHSMFIGPPPNLRGDIPMYELKPVMKETIRFIGMRYEASRERLQSAYPGDSSRWQEITEEQDGDIALLGVSGKLPFDLPRDLLPLGDDNLSESGGGGENNIPEK 209
            MKIDQIFSR + G+KG N+FTR++   +++ASY  VP+  STL NEGNF   L GR   +P IT + AF + +  +G V V VK  M   +  G  R+G      PPH +FIG PP ++ D P YELK V  E IR +  RY AS E L + YP  + R      EQ   +  L  +G   FDLP   LP  D   +E+G    N+I E+
Sbjct:   61 MKIDQIFSRFSRGIKGKNIFTRTQLAEVLQASYTEVPVFCSTLGNEGNFNGLLQGRVNRVPDITTYRAFRVEKGGDGRVKVRVKHHMHGTECKGIGRNGDVDPNAPPHDLFIGHPPRIQ-DAPPYELKEVSDEIIRKVEQRYLASHESLAATYPLGAQR---AKNEQMDSVRRLKETGLREFDLPVHWLP-DDYGGAEAGVRNGNDIEEE 265
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCW3_9PHAE3.400e-3542.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:465901..467369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.122.1mRNA_P-littoralis_Contig71.122.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig71 465759..467780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig71.122.1 ID=prot_P-littoralis_Contig71.122.1|Name=mRNA_P-littoralis_Contig71.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=318bp
MKIDQIFSRLALGVKGLNVFTRSEQVAIIKASYKAVPMNVSTLRNEGNFK
DFLMGRYKMIPSITRWWAFLLLRSEGNVGVCVKEFMRSRDWSGPTRDGKS
RAGTPPHSMFIGPPPNLRGDIPMYELKPVMKETIRFIGMRYEASRERLQS
AYPGDSSRWQEITEEQDGDIALLGVSGKLPFDLPRDLLPLGDDNLSESGG
GGENNIPEKSQVYKLTICLMSSLPTKALHPDHTRDTGLENHPSSRIDFFL
ESSTLSWAESNPKAISVSLLPYSLQRKEANIDTRILLLFGPCEALVVGLV
DARGETSMENTFIAVPC*
back to top