prot_P-littoralis_Contig70.45.7 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.45.7
Unique Nameprot_P-littoralis_Contig70.45.7
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length270
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig70.45.7 vs. uniprot
Match: D7FUD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.910e-7
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:  158 AGGRHRETLAFMARQRKQAAKEKRRAEQEKLETAENLRRALE 199
            +G RHR+TLAFM RQRKQAA EKRRA+QEK+E+AENLRRALE
Sbjct:  172 SGDRHRQTLAFMVRQRKQAAMEKRRAQQEKIESAENLRRALE 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.45.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUD9_ECTSI3.910e-780.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableCOILSCoilCoilcoord: 166..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:271007..272105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.45.7mRNA_P-littoralis_Contig70.45.7Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 271007..272105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.45.7 ID=prot_P-littoralis_Contig70.45.7|Name=mRNA_P-littoralis_Contig70.45.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=270bp
PLRRRVLRSGGTGGAHASAGVSKAHVTDAGRRNGSAVVERALEQPPAGAG
RGRGRAGGLRVAVGGDGDGSKAVSSAPGGREEGAPVPGPSSKDISAAPAV
VARARTAVPGRDGEGGTSNTAVVQSHGRHEEKAAAMEEEAGAQEQQRRRE
RGGKDAYAGGRHRETLAFMARQRKQAAKEKRRAEQEKLETAENLRRALEK
LEHTRRRNLAQQRPLRSRSRENMHAPRQPRSAPVAAGRARRRPHSSAAVT
REAPPPPEPRPAWVGAGERK
back to top