prot_P-littoralis_Contig1179.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1179.6.1
Unique Nameprot_P-littoralis_Contig1179.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length284
Homology
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JB61_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB61_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 9.170e-100
Identity = 144/205 (70.24%), Postives = 164/205 (80.00%), Query Frame = 0
Query:    1 ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADL 205
            + ASKRARK PI W E E+ AF+QL+  LASPTVLAFPDPN PFELH+DAS VG+GA L+Q +GG PR+IAFASH+FS TDARRGPTERECMGVLW V HF+PY+ GR+F +VTDCSALTWLFRS++LCP LHR ALRLMEYD+   WR G +  LPDALSRLP A  P  DIDDSF DD TS     FVGP+GP L+GV LADL
Sbjct:  116 DFASKRARKLPIQWEEAEEHAFHQLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIGGTPRIIAFASHKFSPTDARRGPTERECMGVLWGVDHFKPYLAGRQFRVVTDCSALTWLFRSKELCPKLHRGALRLMEYDIVFAWREGVHHVLPDALSRLPVASSPSVDIDDSFPDDFTSPDSATFVGPQGPVLDGVRLADL 320          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 2.050e-96
Identity = 147/205 (71.71%), Postives = 168/205 (81.95%), Query Frame = 0
Query:    1 ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADL 205
            + ASKRARK PI WG+ E+ AF+ L+  LASPTVLAFPDPN PFELH+DAS VG+GA L+Q + G PR+IAFASH+FSRTDARRGPTERECMGVLW V HF+PY+ GR+F +VTDCSALTWLFRSR+LCP LHRWALRLMEYD+ LEWRAG +  LPDALSRLP A  P  D+DDSF DD TS     FVGP+GP L+GV LADL
Sbjct:  563 DFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIDGTPRIIAFASHKFSRTDARRGPTERECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLEWRAGVHHVLPDALSRLPVASSPSVDVDDSFPDDFTSPDSATFVGPQGPVLDGVRLADL 767          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JZD5_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.080e-94
Identity = 156/264 (59.09%), Postives = 182/264 (68.94%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAE--TPRRSRRLPYP 260
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEY+M LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+   + P     H++AL  + PF AC ++  E   PRRS R   P
Sbjct:   19 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYEMELEWKAGVEYVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPSH--LTPEGADFHLSAL-RALPFVACAAVDHEPDAPRRSGRTRTP 278          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 9.140e-90
Identity = 159/266 (59.77%), Postives = 183/266 (68.80%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSE--HITALTSSFPFAACESLPAE--TPRRSRRLPYP 260
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+    HP       H++AL  + PFAAC ++  E   PRRS R   P
Sbjct:  420 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPS----HPTPEGADFHLSAL-RALPFAACAAVDHEPDAPRRSDRTRTP 679          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 5.760e-88
Identity = 159/266 (59.77%), Postives = 183/266 (68.80%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSE--HITALTSSFPFAACESLPAE--TPRRSRRLPYP 260
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+    HP       H++AL  + PFAAC ++  E   PRRS R   P
Sbjct:  942 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPS----HPTPEGADFHLSAL-RALPFAACAAVDHEPDAPRRSGRTRTP 1201          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.220e-87
Identity = 142/216 (65.74%), Postives = 159/216 (73.61%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLEANAIHDTDQTP 217
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+   +   DQ P
Sbjct:  418 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVQLLGPELKGVRLAELDPVQV---DQRP 629          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.650e-82
Identity = 126/179 (70.39%), Postives = 139/179 (77.65%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDD 180
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFA+HRF +TDARRG TERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD
Sbjct:  278 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFANHRFLQTDARRGLTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD 456          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 7.280e-81
Identity = 120/165 (72.73%), Postives = 132/165 (80.00%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHA 166
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRG TERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYD+ LEW+AG    +PDALSRLP A
Sbjct:  146 FASKRARKLPIQWSAAEEDAFQYLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGHTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPTLHRWALRLMEYDLELEWKAGVEHVVPDALSRLPVA 310          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JIE2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE2_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.120e-77
Identity = 142/248 (57.26%), Postives = 165/248 (66.53%), Query Frame = 0
Query:   18 EDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLEANAIH---DTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAE--TPRRSRRLPYP 260
            ED AF   +  LASPTVLAFPD  RPFELHTDAS +G GA L Q + GA R +AFASHRF +TDARRGPTERE MGVLWAV HFRP +  R+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALS LP       D DDSF DD +S +    V   GP L+GV LA+L+   +    D D  P+     P   + H++AL  + PFAAC ++  E    RRS R   P
Sbjct:  194 EDDAFQSFRETLASPTVLAFPDLERPFELHTDASTLGVGASLTQTIDGATRAVAFASHRFWQTDARRGPTEREGMGVLWAVDHFRPCLACRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSWLPVTCPVEVDADDSFPDDLSSTAAGASVEIVGPDLDGVRLAELDPVQVDRGGDADSQPSHPT--PEMTNFHLSAL-RALPFAACAAVDPERDAARRSGRTRTP 438          
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.670e-71
Identity = 135/284 (47.54%), Postives = 150/284 (52.82%), Query Frame = 0
Query:    2 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLH-----------------------------------------------------------------------------------RWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLL 202
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LH                                                                                   RWALRLMEYDM LEW+A     +PDALSRLP A     D+DDSF DD  S +    V   GP L+G +L
Sbjct:  234 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHSTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAEVEHVVPDALSRLPVANPVEVDVDDSFPDD-VSRAAGAAVEIVGPELKGAML 516          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB61_9PHAE9.170e-10070.24RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBF4_9PHAE2.050e-9671.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZD5_9PHAE1.080e-9459.09RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFK7_9PHAE9.140e-9059.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE5.760e-8859.77RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JQV6_9PHAE2.220e-8765.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIS6_9PHAE1.650e-8270.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIH2_9PHAE7.280e-8172.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JIE2_9PHAE2.120e-7757.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9Z4_9PHAE1.670e-7147.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 14..112
e-value: 2.1E-33
score: 114.4
NoneNo IPR availableGENE3D3.10.20.370coord: 39..113
e-value: 1.8E-13
score: 52.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..190
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 11..164
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 45..164
e-value: 7.03673E-50
score: 158.81
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 9..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1179contigP-littoralis_Contig1179:40344..44491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1179.6.1mRNA_P-littoralis_Contig1179.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1179 40344..44492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1179.6.1 ID=prot_P-littoralis_Contig1179.6.1|Name=mRNA_P-littoralis_Contig1179.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=284bp
ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDA
SQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQH
FRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRA
GTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGV
LLADLEANAIHDTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAET
PRRSRRLPYPLCSTEASESVSVASTLDLPHVSPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041577RT_RNaseH_2
IPR043502DNA/RNA_pol_sf