prot_P-littoralis_Contig7.252.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.252.1
Unique Nameprot_P-littoralis_Contig7.252.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length95
Homology
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BLAST of mRNA_P-littoralis_Contig7.252.1 vs. uniprot
Match: D7FV65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV65_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 9.880e-38
Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0 
Query:    1 METVNPLLASALDFLKQGDVERAEKEFTEATVCSVRAFGEVDIVTARTLAHLARVCSLRGKKDVAAQMYERILRIQEALPAPVNCDHAAALSELA 95
            ME VNPLLA+AL  LKQG  E AEKEFT+A    + AFGE DIVTARTLAHLARVC L+GK DVA QMYERILRI EALP P+N DHA AL ELA
Sbjct:    1 MEIVNPLLANALGVLKQGSTEIAEKEFTKAVSACLTAFGETDIVTARTLAHLARVCRLQGKVDVAIQMYERILRIHEALPEPLNSDHAVALGELA 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV65_ECTSI9.880e-3873.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 10..77
e-value: 3.3E-9
score: 36.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..95
e-value: 6.4E-11
score: 43.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:990869..991351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.252.1mRNA_P-littoralis_Contig7.252.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 990869..991362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.252.1 ID=prot_P-littoralis_Contig7.252.1|Name=mRNA_P-littoralis_Contig7.252.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=95bp
METVNPLLASALDFLKQGDVERAEKEFTEATVCSVRAFGEVDIVTARTLA
HLARVCSLRGKKDVAAQMYERILRIQEALPAPVNCDHAAALSELA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf