mRNA_P-littoralis_Contig7.216.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.216.2
Unique NamemRNA_P-littoralis_Contig7.216.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A6H5JQ98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ98_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 1.800e-148
Identity = 236/280 (84.29%), Postives = 253/280 (90.36%), Query Frame = 2 
Query:  263 MSARGRPSARAKDKEDAKALGVHRVPENQKREVYERVRRAIEAKPEVCTNHKVGSSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQ----DTHRAKVEASA-GMN-PAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGLAQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFADMQKLPVQINPYFITGSAPPGMGAARPGSPAHHLHP 1084
            M+ARGRPSA+ K+KE  +ALGVHRVPENQKREVYERVRRA+EAK  VCT+HKVGSS WD NEQRVLEDGLRYY H++HSNMLIYIRIAA LPKKTVRDVAHHLR+MQ    D HRAK EA+A GMN PAKRHHPDPGAAAAMAAMHEH MAAMFAANAAAGMAAM TLPGLA GLAGP+GPGPHLKDEKVEARVC L+QENM LINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFA+MQKLPVQINPYFITGS P G+G  +PGSP+HH+ P
Sbjct:    1 MAARGRPSAKEKEKEVERALGVHRVPENQKREVYERVRRAMEAKNGVCTSHKVGSSSWDENEQRVLEDGLRYYSHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQARSRDEHRAKPEAAAPGMNNPAKRHHPDPGAAAAMAAMHEHHMAAMFAANAAAGMAAMQTLPGLAPGLAGPSGPGPHLKDEKVEARVCTLLQENMALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQINPYFITGSLPAGVGVQQPGSPSHHVQP 280
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: D7FV74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV74_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 5.850e-54
Identity = 93/107 (86.92%), Postives = 101/107 (94.39%), Query Frame = 2 
Query:  263 MSARGRPSARAKDKEDAKALGVHRVPENQKREVYERVRRAIEAKPEVCTNHKVGSSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQ 583
            M+ARGRPSA+ KDKEDA+ALGVHRVPENQKREVYERVRRA+EAK  VCT+HKVGSS WD NEQRVLEDGLRYYPH++HSNMLIYIRIAA LPKKTVRDVAHHLR+MQ
Sbjct:    1 MAARGRPSAKEKDKEDARALGVHRVPENQKREVYERVRRAMEAKTGVCTSHKVGSSSWDKNEQRVLEDGLRYYPHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQ 107
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.820e-19
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 2 
Query:  848 MVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFADMQKLPVQ 1000
            M LINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFA+MQKLPVQ
Sbjct:    1 MALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQ 51
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A5B6V3A2_9ROSI (Rab GTPase-binding effector 1 n=2 Tax=Gossypium TaxID=3633 RepID=A0A5B6V3A2_9ROSI)

HSP 1 Score: 65.1 bits (157), Expect = 8.490e-8
Identity = 58/200 (29.00%), Postives = 92/200 (46.00%), Query Frame = 2 
Query:  425 SSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGL----AQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLP--FADMQKLPVQIN 1006
            ++ W   EQ +L+DGL  Y  +E  N++ YI+IAA LP KTVRDVA   R+MQ   R   E +AG     R     G+++ M       +      N AA    MH L  +    ++G++G                +  L+++N  +++ I  N+ + +  DN  L      N+  V   +A +P   + M  LPV +N
Sbjct:   83 ATEWSTEEQYILKDGLEKY--KEEPNIMKYIKIAAVLPDKTVRDVALRCRWMQRKRRKLEELNAGKKVNNRKDKQVGSSSKM------NLPTALPQNMAASPFIMHHLDQIKRKPSEGISG--------------TTIMHLLKQNAQVLSQIASNLSLYKLQDNIDLFCHARNNITAVLKDMADMPGLMSRMLPLPVSVN 260
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A7J8VW35_9ROSI (Uncharacterized protein n=21 Tax=Gossypium TaxID=3633 RepID=A0A7J8VW35_9ROSI)

HSP 1 Score: 65.5 bits (158), Expect = 1.220e-7
Identity = 60/205 (29.27%), Postives = 94/205 (45.85%), Query Frame = 2 
Query:  413 HKVG-SSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGL----AQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLP--FADMQKLPVQIN 1006
            H +G ++ W   EQ +L+DGL  Y  +E  N++ YI+IAA LP KTVRDVA   R+MQ   R   E +AG     R      +++ M       M      N AA    MH L  +    ++G++G                +  L+++N  +++ I  N+ + +  DN  L      N+  V   +A +P   + M  LPV +N
Sbjct:  132 HDMGFATEWSTEEQYILKDGLEKY--KEEPNIMKYIKIAAVLPDKTVRDVALRCRWMQRKRRKPEELNAGKKVNNRKDKQVESSSTM------NMPTALPQNMAASPFMMHHLDQIKRKPSEGISG--------------TTIMHLLKQNAQVLSQIASNLSLYKVIDNIDLFCHARNNITAVLKDMADMPGLMSRMLPLPVSVN 314
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A7J9FAH5_9ROSI (Uncharacterized protein n=11 Tax=Gossypium TaxID=3633 RepID=A0A7J9FAH5_9ROSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.960e-7
Identity = 60/205 (29.27%), Postives = 94/205 (45.85%), Query Frame = 2 
Query:  413 HKVG-SSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGL----AQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLP--FADMQKLPVQIN 1006
            H +G ++ W   EQ +L+DGL  Y  +E  N++ YI+IAA LP KTVRDVA   R+MQ   R   E +AG     R      +++ M       M      N AA    MH L  +    ++G++G                +  L+++N  +++ I  N+ + +  DN  L      N+  V   +A +P   + M  LPV +N
Sbjct:   78 HDMGFAAEWSTEEQYILKDGLEKY--KEEPNIMKYIKIAAVLPDKTVRDVALRCRWMQRKRRKPEELNAGKKVNNRKDKQVESSSTM------NMPTALPQNMAASPFMMHHLDQIKRKPSEGISG--------------TTIMHLLKQNAQVLSQIASNLSLYKLQDNIDLFCHARNNITAVLKDMADMPGLMSRMLPLPVSVN 260
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A0D2W2C0_GOSRA (Uncharacterized protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2W2C0_GOSRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.290e-7
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2 
Query:  410 NHKVGSS-PWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAG 619
            NH  G +  W  +EQ +LEDGL  Y  +E  N+L YI+IAASLP+KTVRDVA   R+MQ   R   E +AG
Sbjct:   69 NHDTGLAVEWSVDEQYILEDGLEKY--KEEPNILKYIKIAASLPEKTVRDVALRCRWMQRKRRKPEEHNAG 137
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A5J5RZJ4_GOSBA (Uncharacterized protein n=8 Tax=Gossypium TaxID=3633 RepID=A0A5J5RZJ4_GOSBA)

HSP 1 Score: 63.5 bits (153), Expect = 2.450e-7
Identity = 60/205 (29.27%), Postives = 92/205 (44.88%), Query Frame = 2 
Query:  413 HKVG-SSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGL----AQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLP--FADMQKLPVQIN 1006
            H +G ++ W   EQ +L+DGL  Y  +E  N++ YI+IAA LP KTVRDVA   R+MQ   R   E +AG     R      ++  M       M      N AA    MH L  +    ++G++G                +  L+ +N  +++ I  N+ + +  DN  L      N+  V   +A +P   + M  LPV +N
Sbjct:   60 HDMGFATEWSTEEQYILKDGLEKY--KEEPNIMKYIKIAAVLPDKTVRDVALRCRWMQRKRRKPEELNAGKKVNNRKDKQVESSLTM------NMPTTLPQNMAASPFMMHHLDQIKRKPSEGISG--------------TTIMHLLNQNAQVLSQIASNLSLYKLQDNIDLFCHARNNITAVLKDMADMPGLMSRMLPLPVSVN 242
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A1U8KT25_GOSHI (uncharacterized protein LOC107920411 isoform X3 n=13 Tax=Gossypium TaxID=3633 RepID=A0A1U8KT25_GOSHI)

HSP 1 Score: 62.4 bits (150), Expect = 6.620e-7
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2 
Query:  410 NHKVGSS-PWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAG 619
            NH  G +  W  +EQ +LEDGL  Y  +E  N+L YI+IAASLP+KTVRDVA   R+MQ   R   E +AG
Sbjct:   69 NHDTGLAVEWSVDEQYILEDGLEKY--KEEPNILKYIKIAASLPEKTVRDVALRCRWMQRKRRKPEEHNAG 137
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BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Match: A0A7S4A477_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A477_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.330e-6
Identity = 52/198 (26.26%), Postives = 80/198 (40.40%), Query Frame = 2 
Query:  434 WDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVAHHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAANAAAGMAAMHTLPGLAQGLAGPNGPGPHLKDEKVEARVCALVQENMVLINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPF-ADMQKLPVQINPYFITG 1024
            W   EQ+ LE   R YP  EHS +    +IAA LP+K++RDV   LR +       ++  A   PA+                                      PG A+  A             +E +   L+Q+N+ +++ +REN+   +  DN PLM  FD NV+     L  L   A M   P+++N  ++ G
Sbjct:   10 WTEAEQKQLETLARRYPSSEHSLVTQCAKIAAGLPRKSIRDVGARLRLLA------LDPLATAQPAR--------------------------------------PGTARHAA-------------LEKQCRDLLQQNVAVVSEMRENLHKIQLMDNIPLMRRFDANVRATFETLEALESEAQMPPFPLEVNTMYLAG 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.216.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQ98_9PHAE1.800e-14884.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV74_ECTSI5.850e-5486.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G053_ECTSI8.820e-1996.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5B6V3A2_9ROSI8.490e-829.00Rab GTPase-binding effector 1 n=2 Tax=Gossypium Ta... [more]
A0A7J8VW35_9ROSI1.220e-729.27Uncharacterized protein n=21 Tax=Gossypium TaxID=3... [more]
A0A7J9FAH5_9ROSI1.960e-729.27Uncharacterized protein n=11 Tax=Gossypium TaxID=3... [more]
A0A0D2W2C0_GOSRA2.290e-752.11Uncharacterized protein n=1 Tax=Gossypium raimondi... [more]
A0A5J5RZJ4_GOSBA2.450e-729.27Uncharacterized protein n=8 Tax=Gossypium TaxID=36... [more]
A0A1U8KT25_GOSHI6.620e-752.11uncharacterized protein LOC107920411 isoform X3 n=... [more]
A0A7S4A477_9STRA1.330e-626.26Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:853107..858918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog29730.Gorai.012G184000.1
PFAMsDUF3755
Model size2010
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.33e-08
EggNOG OGs28JBB@1|root,2QRQ9@2759|Eukaryota,37SQ7@33090|Viridiplantae,3GA29@35493|Streptophyta
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_007290.1
Descriptionisoform X1
Cds size1467
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.216.2prot_P-littoralis_Contig7.216.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 853388..858407 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791455.9381506-UTR-P-littoralis_Contig7:853106..8533871680791455.9381506-UTR-P-littoralis_Contig7:853106..853387Pylaiella littoralis U1_48UTRP-littoralis_Contig7 853107..853387 -
1680791456.0293107-UTR-P-littoralis_Contig7:858407..8586011680791456.0293107-UTR-P-littoralis_Contig7:858407..858601Pylaiella littoralis U1_48UTRP-littoralis_Contig7 858408..858601 -
1680791456.0395887-UTR-P-littoralis_Contig7:858850..8589181680791456.0395887-UTR-P-littoralis_Contig7:858850..858918Pylaiella littoralis U1_48UTRP-littoralis_Contig7 858851..858918 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791455.9528556-CDS-P-littoralis_Contig7:853387..8541161680791455.9528556-CDS-P-littoralis_Contig7:853387..854116Pylaiella littoralis U1_48CDSP-littoralis_Contig7 853388..854116 -
1680791455.9685447-CDS-P-littoralis_Contig7:854465..8546481680791455.9685447-CDS-P-littoralis_Contig7:854465..854648Pylaiella littoralis U1_48CDSP-littoralis_Contig7 854466..854648 -
1680791455.9785755-CDS-P-littoralis_Contig7:855380..8556141680791455.9785755-CDS-P-littoralis_Contig7:855380..855614Pylaiella littoralis U1_48CDSP-littoralis_Contig7 855381..855614 -
1680791455.9903357-CDS-P-littoralis_Contig7:856469..8566341680791455.9903357-CDS-P-littoralis_Contig7:856469..856634Pylaiella littoralis U1_48CDSP-littoralis_Contig7 856470..856634 -
1680791456.0028174-CDS-P-littoralis_Contig7:857028..8571661680791456.0028174-CDS-P-littoralis_Contig7:857028..857166Pylaiella littoralis U1_48CDSP-littoralis_Contig7 857029..857166 -
1680791456.018718-CDS-P-littoralis_Contig7:858389..8584071680791456.018718-CDS-P-littoralis_Contig7:858389..858407Pylaiella littoralis U1_48CDSP-littoralis_Contig7 858390..858407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.216.2

>prot_P-littoralis_Contig7.216.2 ID=prot_P-littoralis_Contig7.216.2|Name=mRNA_P-littoralis_Contig7.216.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=489bp
MSARGRPSARAKDKEDAKALGVHRVPENQKREVYERVRRAIEAKPEVCTN
HKVGSSPWDNNEQRVLEDGLRYYPHEEHSNMLIYIRIAASLPKKTVRDVA
HHLRYMQDTHRAKVEASAGMNPAKRHHPDPGAAAAMAAMHEHQMAAMFAA
NAAAGMAAMHTLPGLAQGLAGPNGPGPHLKDEKVEARVCALVQENMVLIN
SIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFADMQKLPVQINPY
FITGSAPPGMGAARPGSPAHHLHPPRGDAPAPGPGGIGIAGHANGNGDGL
NGHDNSQPPVNGVDQPIAAAAAPPAVAGAAPATGGAPVPAAAPPPRPPPP
PQQQQQQQQQQQQQQQQPPSYAVALPAVTQAAQDPQHNQLQQPLVEAVPN
AAEIMAAAKEAASAAASAIAGTPPGVDPAFVAVPAPAAPTPTITTTAPIA
ELPGEAGGGGGGGVGETGDGIGRNGPLADPSGVAPPQA*
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mRNA from alignment at P-littoralis_Contig7:853107..858918-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.216.2 ID=mRNA_P-littoralis_Contig7.216.2|Name=mRNA_P-littoralis_Contig7.216.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5812bp|location=Sequence derived from alignment at P-littoralis_Contig7:853107..858918- (Pylaiella littoralis U1_48)
CAGCGATTGTGGTATAGTCAGCCCGGCGCCGGGACCAAAAGTGGTGTTAC
CACACCCGTGAGAGACAGGTGAGAAGAAAATTCCACAATCATAAATAGTG
AGCGACACCGGTGACGTAGCTGTGCCTCACCAGCACATGATTCTGACCAA
CACATTTACACCAAACCGTCCACCCCCCTCCGATGTCTGTGTACGTCTCT
ACCTACCTGACCTCTTTGTCCACTGCAAACACCCGGCGTATCTATCCTTT
CGCTCTTTTATAAGGTGTGCGAAACATCCTGACTGCTGTTGTTTCTCCCA
CGCGTTCGATGCCGCAGGTATCGAGGGGAGGGGGCAGTGCCTCGTTTCTA
GGCCGGCCACCTATTGCTCGTGTTTGAATACATTCGTTGAGTGTTTGAAG
CCCATCATATCACCGCAACCGCCGCACGACGCTGGGCAGACAAACAAACG
GGTTGGGTGATCGTCGGTTTAGTCCAGAGAGGTCAGCTGCCGGGACGGAG
GGGAGAGGAGCATGTCTGCGAGAGGACGGGTGAGAGAATCGGCGTGTGAG
GAGGAGGCACGATGTTGATGTTGCTTCTGCGCACACTCTCCCTTGCGACA
TGCCTTGAAATCCTACCACCCTTGATAATCAAAACGCGTTCGCGACGTGT
GAGGCGAGAGCGTAGTCCAAGATCGCTACAATATCATATCATTCGTATCT
CCTTCGGGTTTTCAGTACTACTGCTGTAGGTACCAAGTGGGAGTCTTTTC
AAAATCTTGCGCTTCCGACGCAACAGCCAGTGTATCTGGAATCAGACGAT
GTGAAGAGCTCGCTGCTCGTTCTGGTGCAGGAGCAGCACCAAAGGAATTC
AAACGGTTTGCTTCGTTGGGTATCATCTCTGCAGAAAGTACATAGGAAAT
GTGAAGGGATCATTATTTCTTTCTGTGTGCGTGCCTTCGCCCCCCTCTGT
TGACCCAAGATATCAAATACTTCGAACTAGATCTTAAATACTTCCGTACT
TCAAATGTAGGTCGACGTTACAGCATATGATCATGTCTGGAGGTCCGGTT
TGCTCCAACACGTCTGCCTAGATCTCGACCACAAACGTCGCACAGGCCCG
AATACTACCGACGACAGCCGGCTGTCCTGTCCAGCATCGGACGAAACTGC
GATTCCCAGCTGTCGGCGTTTTTCTCGACACCCCATCACATGCATATCAT
ATGATACAGCAGTACTACAGTCAAATCGTACAACAACAGTTGCATGCAGT
ACATGTACCAACTGCTGGTTTGGTCAGCTCATTCTGCCGCATGATAGAAT
ACGTACACGGTCATTCCCGACATCGCCCGTGCACAAAGTCTTCGAGAAGT
CGTAGACAAATTTTTGTCTCGGGGAAAAAATACCATAATTTCCCACAACA
TACCATGCTGCCTGTGGGATTACTTCGTATTTATCGTTGTGTGCGACACG
CGCCCGACTTGGCGCTGACCAATGGAAGCGTTCCAACAGTCTTGGCCTAT
TTTTTTCCAAACACTTTGGTTTGTGCACACGAGGTCCTTCCACCACTGAC
ATACGCTCTTTGTGCCCTTGCTGGCCTTTAACTTTCGACAACAGAGTGGA
GCCGCGTGGCGGTCAGTCTTACCGCCCCGCACCATGGCTGCTACTATCTG
ATGCTGCGTCGCCGGATCGGCACACTCAATGGATTGTCGTTGCTGCTGTT
TCTTTCCGTTGACCATCATCACAATGCCACGTGTGTGTGTGTGTGATCGC
AGCCGTCCGCTAGGGCCAAGGACAAGGAAGATGCCAAAGCACTTGGGGTG
CATCGAGTGCCCGAGAACCAGAAGCGGGAGGTCTACGAGAGGGTCAGAAG
GGCCATAGAAGCGAAGCCTGAGGTCTGCACCAACCACAAGGTCGGGGGCA
GGCGTATCGCATGTAGCATAACGCCAGCGCAACGCCAGCGCAGCGGAAAG
GTTGCACATGGCGGGGTAGCTCGCGAACTGACAACACACGTGCTGTTGTC
ATATCGCACATCTATCCGCGGCGGTCTTCTGTCTTAAATTTGCTGCTGCT
GCTTGACGAACTCGCCGTGCTGCATGGTGATACGCACACACCATACAATC
GATGTCTTTCGCTGTAACCGACGACCACCCCGTAAGCCAAATAGCACCTT
GGCACCGTGGCCAGATGTTCATGGAGGTGTTGACTGTGGTGCCAAAGTAC
ACTGTGGGCGATGGCTCTGTCTGTGTTTCAGCAGAAAGCAGCTCCAGAAA
ATAACCAAATCTTGTCACGAAAAAACGCAATCAGGTAGGATCATCGCCAT
GGGATAATAACGAGCAGAGGGTGCTTGAGGACGGGTTGCGCTACTATCCC
CACGAGGAGCACAGCAACATGCTCATCTACATCCGCATCGCCGCCAGCCT
GCCGAAGAAAACGGTCAGAGATGTCGCCCACCACCTACGGTACATGCAGG
TGAGACCGAGGTCTGTCTCGTCTTGTCCCCTACGGCATGCACCGGTTGTG
TGTTCGTGTGTGTTCAGCTCTCACCAAGTGCTGCTGCTGCTGTTGCTGCT
GCTGGTATGTCGTTGTCGGCAGTTCAGAGTTGTTGGCGTCGTTGTCGTTG
CAGGATCACCTGTGCCTTATTATTTTGTTTTTTCTCCACGGACCAGGCCG
ACCTCTCATGACCCATTCCTTTCACCATGCGGTTCTCTGTTGTTTCAGAA
GGAGAGGGGTCTACCGGTATTATCTTCTTCTGAAACTTCCGCGACGTACT
GTTGAACATTTCACTCATAGAAGTGGGGTACCATAGCTTCGATTTTGAGA
CTGATCGACCGTGGCCGATTGACCTAACAAAACGAAACGGCGGCGCTTCC
CCCTTTTCGGTGTGCTTGGAAGGCCGTCCGTCCAGTTGCCCGACGGCGAA
GAAATGAGCTCTTGACCTGAAAAAGTAGTTTCGTTGACTTGTTTACAGAC
TGGTCAAGATGTGCCAGTCGCACGCCGGTTCATTAGCCGTGGTCGAGGGT
AACCATGAAAATCAAGCCATTTATTCAAGTACTAGGCGATGGACACAGCA
TTTACCTGAGTTTCGACTGCCGTGTAGTACCACCGTAGCTTTTCCTGTCG
CCCATCCGACACCTTGATGTCGCCCATCCGACACCTTGATGCCGGAGGGA
ATCCATCACCGTACACGGCGCGAGTACAGCACAGTACAAATGTGATTCTC
TTAGTACGTCTCTCCTCGATGCTTGCCCACCCTCCCCGGCACTTTTGCTA
CAAGTACCGCTGCACCCGTGACAATAATATTACATAATTTCTCCCTTCGA
AAAGGACACGCACAGGGCCAAGGTAGAGGCTTCAGCAGGGATGAATCCGG
CGAAACGACATCACCCTGACCCGGGAGCGGCGGCAGCGATGGCGGCAATG
CACGAACATCAGATGGCTGCGATGTTCGCCGCGAACGCGGCGGCAGGGAT
GGCTGCGATGCACACGCTGCCCGGACTGGCGCAAGGGCTGGCGGGCCCAA
ACGGGCCGGGACCTCACCTGAAGGACGAGAAAGTGGAGGTGAGGCAAAGG
GGGTGCGGACGGTCCGTGGTCGATCAACGAAATGGGGTCTGATCGTTCGT
TTGCGGGAGCGCGTTGAGGAAGGACCTCGGTCGGCAGCTGTGTTGGTGCG
CCATTCGGTTGGTTGGTCGGGGCAGGTGTTGAGGCTGACCGTAGCCTTTG
TTCACGGTTTCCGCCCGCGACGAAGACCGATTTGACCGGCAATGCTTGCG
AGCAGGTTATACGGGTGCTAGGTTGTTTTGAGTCCAAACGTGCCGGTTGC
TGTGTTGTTTGCATGGCCACAAGTGCATACGGCACTCCTCGTCTGCACGC
TCTCCCGCTCATGTATTTGCTGCTATAAGATGTCAGTATTTATATCTATG
AGCACGGCAGTGTGCTACTGCCCGTATCGCCATCGCTGAGTAACAACCCC
AAAACTGCTACTGCTGTATCCCGTTCCCGTCGGTTGTTGCGGGAGGTGTT
CGTGCACGTGTTTGGTTGGATCGACGTCGAAGGCCCACTCGTAGTGTCAG
CAAGATTCACATTGCAAACATTGCCCCGCAACCCCTCCGCACCTTCCGGG
TCTGACTGGCGGCATCGAGGAATGCTGGAGGTGTTGAGTTTGGAGTTTGT
CCTCTCCCACTCCACCCCCCCCACCCGACCTCCATCTCGCCATCCCTCGC
CACCTCGCCCTCGACGCGTGCGTTGCTGACACCCGCTTATGCGTTTCTAC
GGCTGCCTGGTTTGTCCCAGGCGCGCGTATGCGCACTGGTGCAGGAGAAC
ATGGTCCTTATCAACAGCATTCGCGAAAACATGGTGATGGGCAGATTCTT
CGACAACCACCCCTTGATGATCGCCTTCGACAAGAACGTGAAGGAGGTCA
CTGCCCTGCTGGCCACGCTGCCCTTCGCCGACATGCAGAAACTGCCCGTG
CAGGTGAGCGAGAAATCGCACCGTTAGCGTTGCACTAGCTTCGTTCTCCT
TACAGGGACAAAGGTTCTCATCAGTTTCCAGTTCAAAATGCATTTTGTCT
GTCGGTGTGTTTGTATGAGAGACCGATGCGGCTGTGTTGCCAGATTAAAC
GCGTTTTACAGCAGAAGCCGAAAGAAGCTCTAAATGGGGAGCTGAAAAAG
ACGAACGTGAATTGTGCAACTTACGTAGGACATGCGGGGTTATTTCCCAG
CACTTGTCTCAGGTTTCACTTTTCTCGTCCACGTGCCCCCGCCCACCGAT
TCGTCCGCGCGCGCCGTGAAATTCGAACAACGCCAACATCGACGGAAAAC
AGATCAACCCCTACTTCATCACGGGGTCGGCCCCACCTGGCATGGGTGCA
GCACGACCAGGTTCGCCGGCCCACCACCTTCACCCCCCGCGCGGCGATGC
CCCCGCTCCCGGGCCCGGAGGGATTGGCATCGCTGGCCACGCGAATGGAA
ACGGGGACGGCCTTAACGGCCACGATAACTCCCAGCCGCCGGTTAACGGC
GTTGACCAACCGATTGCCGCTGCTGCTGCTCCTCCTGCGGTGGCTGGAGC
AGCACCGGCGACCGGAGGAGCACCGGTACCGGCGGCAGCACCGCCGCCAC
GACCACCGCCGCCGCCGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAG
CAGCAACAGCAACAGCCACCAAGTTATGCCGTGGCCCTACCTGCCGTTAC
ACAGGCAGCGCAAGATCCCCAACATAATCAATTGCAGCAGCCGCTCGTCG
AGGCGGTACCCAACGCGGCTGAAATCATGGCGGCGGCGAAAGAAGCGGCT
TCGGCCGCTGCTTCGGCTATTGCAGGCACTCCTCCAGGGGTGGATCCGGC
GTTTGTGGCAGTACCAGCACCAGCAGCACCAACACCAACAATAACGACGA
CGGCGCCCATCGCCGAGTTGCCAGGCGAGGCTGGTGGTGGCGGTGGTGGT
GGAGTGGGGGAGACCGGTGACGGTATCGGCAGGAATGGGCCCCTCGCAGA
CCCCTCTGGGGTTGCGCCGCCACAGGCATGAGAGAGAGAGGGGGGGGGAC
GAGGGGAGGTTTGATCATACCGGTTGCTTAGCGGGGAAGGGAGGCGGGGG
GGCGGTGACGACGGTATTCGGCTTGTCTATAGAGTGTCGCAACGCAATTT
TCATTTTGGTGTGTAGGGGTGGAGGTGAGGGAAGAACCGAGGGTTTCATG
CGCTTTTGTCTGGTCTCCATCTCTCTCTTCTGTATGATAATTCCACCAAC
TCGGTTGGGGACAGAAACGGTTCCTGCTCTCGCGGTACTGCTGTATTAAT
ATTACTTGTAGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:853107..858918-

>mRNA_P-littoralis_Contig7.216.2 ID=mRNA_P-littoralis_Contig7.216.2|Name=mRNA_P-littoralis_Contig7.216.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1467bp|location=Sequence derived from alignment at P-littoralis_Contig7:853107..858918- (Pylaiella littoralis U1_48)
ATGTCTGCGAGAGGACGGCCGTCCGCTAGGGCCAAGGACAAGGAAGATGC
CAAAGCACTTGGGGTGCATCGAGTGCCCGAGAACCAGAAGCGGGAGGTCT
ACGAGAGGGTCAGAAGGGCCATAGAAGCGAAGCCTGAGGTCTGCACCAAC
CACAAGGTAGGATCATCGCCATGGGATAATAACGAGCAGAGGGTGCTTGA
GGACGGGTTGCGCTACTATCCCCACGAGGAGCACAGCAACATGCTCATCT
ACATCCGCATCGCCGCCAGCCTGCCGAAGAAAACGGTCAGAGATGTCGCC
CACCACCTACGGTACATGCAGGACACGCACAGGGCCAAGGTAGAGGCTTC
AGCAGGGATGAATCCGGCGAAACGACATCACCCTGACCCGGGAGCGGCGG
CAGCGATGGCGGCAATGCACGAACATCAGATGGCTGCGATGTTCGCCGCG
AACGCGGCGGCAGGGATGGCTGCGATGCACACGCTGCCCGGACTGGCGCA
AGGGCTGGCGGGCCCAAACGGGCCGGGACCTCACCTGAAGGACGAGAAAG
TGGAGGCGCGCGTATGCGCACTGGTGCAGGAGAACATGGTCCTTATCAAC
AGCATTCGCGAAAACATGGTGATGGGCAGATTCTTCGACAACCACCCCTT
GATGATCGCCTTCGACAAGAACGTGAAGGAGGTCACTGCCCTGCTGGCCA
CGCTGCCCTTCGCCGACATGCAGAAACTGCCCGTGCAGATCAACCCCTAC
TTCATCACGGGGTCGGCCCCACCTGGCATGGGTGCAGCACGACCAGGTTC
GCCGGCCCACCACCTTCACCCCCCGCGCGGCGATGCCCCCGCTCCCGGGC
CCGGAGGGATTGGCATCGCTGGCCACGCGAATGGAAACGGGGACGGCCTT
AACGGCCACGATAACTCCCAGCCGCCGGTTAACGGCGTTGACCAACCGAT
TGCCGCTGCTGCTGCTCCTCCTGCGGTGGCTGGAGCAGCACCGGCGACCG
GAGGAGCACCGGTACCGGCGGCAGCACCGCCGCCACGACCACCGCCGCCG
CCGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAACA
GCCACCAAGTTATGCCGTGGCCCTACCTGCCGTTACACAGGCAGCGCAAG
ATCCCCAACATAATCAATTGCAGCAGCCGCTCGTCGAGGCGGTACCCAAC
GCGGCTGAAATCATGGCGGCGGCGAAAGAAGCGGCTTCGGCCGCTGCTTC
GGCTATTGCAGGCACTCCTCCAGGGGTGGATCCGGCGTTTGTGGCAGTAC
CAGCACCAGCAGCACCAACACCAACAATAACGACGACGGCGCCCATCGCC
GAGTTGCCAGGCGAGGCTGGTGGTGGCGGTGGTGGTGGAGTGGGGGAGAC
CGGTGACGGTATCGGCAGGAATGGGCCCCTCGCAGACCCCTCTGGGGTTG
CGCCGCCACAGGCATGA
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