prot_P-littoralis_Contig7.231.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.231.1
Unique Nameprot_P-littoralis_Contig7.231.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length759
Homology
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BLAST of mRNA_P-littoralis_Contig7.231.1 vs. uniprot
Match: A0A6H5JM23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM23_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 5.170e-47
Identity = 92/170 (54.12%), Postives = 111/170 (65.29%), Query Frame = 0 
Query:  405 VKTAAKKKDGGIVHCCRKVDSRCEEKEAWVRAPYLDGKDDGREVGGVFVYLPVAIIRQPSDGQGAEDDNVYARPGGGSETLQAGQEEDRRLIWEVPRPALFDKMPAKEKGATCDTCRDSERGCSWTPDGLELLCNLCADEPRRSVQRCRNSSELRGFGQFRCASSCGCDC 574
            VKT A  K    VHCC +      E E WVR PYL  +D G+EV G FV+LPVAI+  P+ GQ  ++  VY RPGGG  T +    ED+R++WEVP+  + DK+PA E GA CD C D +RGCSWTPDGLELLCN CAD PRR V   R   ELRG+GQF   S+C C+C
Sbjct:  187 VKTIAAAKKIAEVHCCHQPQH---ENEGWVRVPYLSDEDGGKEVVGAFVHLPVAIL-PPTCGQVCDEGTVYVRPGGGRPTRE-WYHEDQRVVWEVPKSTILDKVPAGE-GAKCDACHDDKRGCSWTPDGLELLCNYCADAPRREVGDYR---ELRGYGQFTWVSACDCNC 347
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BLAST of mRNA_P-littoralis_Contig7.231.1 vs. uniprot
Match: D7FPS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS6_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 6.950e-35
Identity = 76/162 (46.91%), Postives = 93/162 (57.41%), Query Frame = 0 
Query:  405 VKTAAKKKDGGIVHCCRKVDSRCEEKEAWVRAPYLDGKDDGREVGGVFVYLPVAIIRQPSDGQGAEDDNVYARPGGGSETLQAGQEEDRRLIWEVPRPALFDK-----------------MPAKEKGATCDTCRDSERGCSWTPDGLELLCNLCADEPRRSV 549
            V+T A  K    VHCC +      E E WVR PYL  +D+G+EV G FV+LPV I+  P+ GQ  ++  VY RPGGG  T +    ED+R++W+VP+  + DK                 M    KGA CD C D  RGCSWTPDGLELLCN CAD PRR V
Sbjct:  210 VETIAAAKKIAEVHCCHQPQH---ENEGWVRVPYLSDEDEGKEVAGAFVHLPVTIL-PPTCGQVCDEGTVYVRPGGGPPTRE-WYHEDQRVVWKVPKSIILDKVILTFSAASRDARCLRNMVPAGKGAKCDACHDDRRGCSWTPDGLELLCNYCADAPRREV 366
[Close]
BLAST of mRNA_P-littoralis_Contig7.231.1 vs. uniprot
Match: D7FU97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU97_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.010e-20
Identity = 59/147 (40.14%), Postives = 68/147 (46.26%), Query Frame = 0 
Query:  405 VKTAAKKKDGGIVHCCRKVDSRCEEKEAWVRAPYLDGKDDGREVGGVFVYLPVAIIRQPSDGQGAEDDNVYARPGGGSETLQAGQEEDRRLIWEVPRPALFDKMPAKEKGATCDTCRDSERGCSWTPDGLELLCNLCADEPRRSVQR 551
            V+T A  K    VHCC +      E E WVR PYL  +D G+EV G FV+LPV I+                                         P    ++PA  KGA CD C D  RGCSWTPDGLELLCN CAD PRR  +R
Sbjct:  241 VETIAAAKKIAEVHCCHQPQH---ENEGWVRMPYLSDEDGGKEVAGAFVHLPVTIL-----------------------------------------PPTCGQVPAG-KGAKCDACHDDRRGCSWTPDGLELLCNYCADAPRRERKR 342
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JM23_9PHAE5.170e-4754.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS6_ECTSI6.950e-3546.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU97_ECTSI3.010e-2040.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 633..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:912179..921235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.231.1mRNA_P-littoralis_Contig7.231.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 910398..921455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.231.1 ID=prot_P-littoralis_Contig7.231.1|Name=mRNA_P-littoralis_Contig7.231.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=759bp
MFFYLVRLLAGAFAADKADVAQQQQQQASPSVEMEEPRDERVPAPMAIKQ
TRTPAAVDRGPRADNARRERSHAADTGPSPPRVVPLTCENLEAFNAFVGM
ERSISTEEGQSQLSERTGGAFPIPETPRRRRNSPEAVAVVTPSPPPRPAA
KVKIYVEQPAASSAAVDVNVAPLLIPDDVMRQSNDDAGIGPSPPPPVAQR
EGISSPDPCPSDVIGGPLLIPDDVRQSNGTIGTGPSSPPPVAQRKRTATR
QSGSTAEENVEESRQHRPSLPSEPKVGASFVPETPSSATSSSDTAAATPA
APSRRPSEKRRVHFGPPQVKWFHKTRPVQILDVRVAGCRRSDSYDTTSGI
EKEFGSTRRQRLHYPIAKWDSDLVKPTTVPWTDAQSAIAGDKQHVLALYS
AGTMVKTAAKKKDGGIVHCCRKVDSRCEEKEAWVRAPYLDGKDDGREVGG
VFVYLPVAIIRQPSDGQGAEDDNVYARPGGGSETLQAGQEEDRRLIWEVP
RPALFDKMPAKEKGATCDTCRDSERGCSWTPDGLELLCNLCADEPRRSVQ
RCRNSSELRGFGQFRCASSCGCDCEGIVADGEQSARQPVLAMPVSSAAPP
PFLSSPLLATESPRRPGVAPAIAKRRRAPESMPQPTPAMPVSSGAAPPPS
SSPAPTPGPPRRSRMAPATTKRQREVESMPQPAVAALGSGDAPFSITHTP
VTVQVPAGEGATCDSCGDSEHRCSWTPDCLELFCDTCADERRRSVQRWGS
SRELLGTG*
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