mRNA_P-littoralis_Contig1175.12.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1175.12.1
Unique NamemRNA_P-littoralis_Contig1175.12.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 1.310e-181
Identity = 260/339 (76.70%), Postives = 280/339 (82.60%), Query Frame = 1
Query:    1 AAEGEGIDGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFG 1017
            AAEG  +  L PE+ALA ALAA D+IQQDD+LSD E                  + D STCAWAQ+L +E+L KD TSI A+KFREDFR+PYPFFLRLVE+VK KDWFAT Q DA GR+ HPVEHKV+ACLTIL RGN FGSIY LSWMS+  VQK FH+FC+HFATEMYDEHIFLP++ENGELDRVMGQYEKLGFPGAMGSTD THI W RCPYNQ RS TGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS  DLLFSKRLESVRKDVECFFG
Sbjct:    4 AAEGR-VKDLHPEVALAAALAALDDIQQDDMLSDAEXXXXXXXXXXXXXXXXXXKNDTSTCAWAQVLEDEDL-KDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFG 340          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 8.870e-154
Identity = 218/332 (65.66%), Postives = 253/332 (76.20%), Query Frame = 1
Query:   22 DGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFG 1017
            D LLP  ALA AL A DE                           R+RK+   CAWAQ+L +++L +D  SI +++FR DFR+P  FFLRLV +VKSKDWF T+  DA+ RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS D THI W +CPYN ARS TGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS  D+LFSKRLESVRKDVECFFG
Sbjct:    8 DALLPATALAGALVALDE---------------------------RKRKEVEKCAWAQMLEDKDL-EDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFG 311          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 1.170e-145
Identity = 210/315 (66.67%), Postives = 250/315 (79.37%), Query Frame = 1
Query:    1 AAEGEGIDGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYP 945
            A  G G D LLP  ALA AL A DE+Q++D LS  E++ A +L R ++ R QRQRK    CAWA++L +++L ++  S  +++FR DFR+P  FFLRLV +VKSK+WFATA  DA+GRQ HPVEHKV+A LTIL RGNCF SIY +SWMS+A VQ  FH FCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS D THI W +CPYN  RS TGKEG PTIGYQVTVNHAGR  AVTEGFTGSTNDKTI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+   + P
Sbjct:    2 AENGVGDDALLPATALAVALVALDEVQRND-LSQEEEDTAPDLTRPRLSRTQRQRKYVERCAWARMLEDKDL-EESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 7.800e-139
Identity = 215/362 (59.39%), Postives = 243/362 (67.13%), Query Frame = 1
Query:   16 GIDGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFG 1017
            G+D LLP  ALA AL A  E                                        LL E++ L+D TSI A++ R DFR+PY  FLRLV +VKSK+WF+TA  DA G   HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFC+HFA EMYDE I LPT+E+G+LD VM QY++LGF GA+GS D THIAW RCPYNQARS TGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFG
Sbjct:    5 GMDALLPATALAVALVAVHE----------------------------------------LLLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFG 326          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 2.870e-123
Identity = 201/341 (58.94%), Postives = 241/341 (70.67%), Query Frame = 1
Query:   43 ALATALAAFDEIQQ------DDILSDVED-----EPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLK-----DRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFG 1017
            A + ALAAF++ QQ      D +L D+++     E  EE  R    RR   RKD +   WA  L+E + L+     D TS  AR+FRE FR+PYPFF+ LV +VK +DWF T + DASGR+G PV+ KV+ACL ILARGNCF  IY +S++S      TFH+F ++FA EMY EHIFLPT +  +  +VM QY++LGF GA GSTD THI WG CPYNQARS TGKEG PT+ YQVTV+H  RVLAVT GFTGSTNDK+II +D AV +IR+D  Y+EK F VY  DGT   LKGCYL+VDNGYHKW TLI PSKYP+   DL FSKRLESVRKDVECFFG
Sbjct:   31 AFSVALAAFNQQQQRTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFG 369          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 6.520e-123
Identity = 196/351 (55.84%), Postives = 245/351 (69.80%), Query Frame = 1
Query:    1 AAEGEGIDGLLPEIALATALAAFDEIQQ-----DDILSDVEDE-----PAEELPRVKMGRRQRQRKDGSTCAWAQLLRE--EELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFG 1017
            A E  GID        A A A+  ++Q+     D I+ D ED+       +E  R    RR   RKD +   W Q L E  E    D T+ EAR+FR +FR+PYPFF+ LVE+V+ +DWF T + D +GRQ  PVE KV+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTD THI WG CPYNQAR  TGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FG
Sbjct:   37 ATESGGIDVPAAFATTAVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFG 385          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.470e-117
Identity = 190/326 (58.28%), Postives = 227/326 (69.63%), Query Frame = 1
Query:   28 LLPEIALATALAAFDEIQQDDILSD--VEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKD 999
            LLP  ALA AL A DE+Q++D+     +E++PA +LP  ++ R QRQRKD  TCAWAQLL +++L +D TSI A++FR DFR+PY FFLRLV +VKSK+WF  A  DA GR  HPVEHKV+A LTIL R NCF SI+ +SWMS+  VQ  FHKFC+HFA +MYDEHI L  +E+G+LD V+      G                 CPYNQARS TGKEG PTI YQV                      TI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRL+SVR+D
Sbjct:   55 LLPARALAVALVAVDEVQRNDLSQQDLLEEDPASDLPFERLARSQRQRKDVETCAWAQLLEDKDL-EDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRD 341          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 1.420e-114
Identity = 188/321 (58.57%), Postives = 225/321 (70.09%), Query Frame = 1
Query:   22 DGLLPEIAL-ATALAAFDEIQQDDILSD---VEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIE-------PSKYPLS 951
            D LLP  AL A  LAA D++Q++D+       E++ A +LPR K+ R QR+RKD   CAWAQ+L +++L  D  SI +++FR DFR+PY FFLRL  +VKSKDWF T+  DA+GRQ HPVEHKV+A LTIL RGNCF SIY +SWMS+    KT                       N ELD VM QY++LGF G+MGS D THI W +CPYN ARS TGKEG P IGYQV V+HAGR +AVTEGFT STNDKTI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCYL+VDNGYHK    +E       PS +PLS
Sbjct:   40 DALLPATALLAVTLAALDKVQRNDLSQKDLLEEEDRAPDLPRPKLNRGQRKRKDVEKCAWAQMLEDKDL-DDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSA----KT-----------------------NDELDHVMEQYDRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVPAIGYQVMVSHAGRAIAVTEGFTCSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKLVNSVESKRPSLGPSPFPLS 332          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5JBL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL1_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 5.960e-113
Identity = 175/297 (58.92%), Postives = 213/297 (71.72%), Query Frame = 1
Query:   22 DGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHK 912
            D LLP  ALA  L A DE+Q++D+  + E++ A +LPR K+ R QR+RKD   CAWA++L +++L +D  SI +++FR DFR+PY FFLRL  +VKSKDWF T+  DA+GRQ H VEHKV+A LTIL RGNCF SIY +SWMS   VQ  FHKF KHFA EMYDEHI+LP+++NGELD VM Q ++LGF GAM S                               VTVNHAGR + VTEGFTGSTNDKTIICWDAAV++IR DKQY ++TFDVYN+DGTT TLKGCYL+VDNGYHK
Sbjct:   40 DALLPATALAVVLVALDEVQRNDLSQEEEEDRAPDLPRPKLSRGQRKRKDVEKCAWAKMLEDKDL-EDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHQVEHKVLAWLTILGRGNCFASIYQMSWMSGKTVQTMFHKFRKHFAREMYDEHIYLPSEQNGELDHVMEQCDRLGFLGAMSSMG-----------------------------VTVNHAGRAIVVTEGFTGSTNDKTIICWDAAVEKIRTDKQYPKQTFDVYNEDGTTTTLKGCYLLVDNGYHK 306          
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.520e-104
Identity = 156/238 (65.55%), Postives = 187/238 (78.57%), Query Frame = 1
Query:   10 GEGIDGLLPEIALATALAAFDEIQQDDILSDVEDEPAEELPRVKMGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGR 723
            G G D LLP  ALA AL A DE+Q++D LS  E++ A +LPR ++ R QRQRKD  TCAWAQ+L +++L +D  S  +++FR DFR+PY FFLRLV +VKSK+WF TA  D +GR  HPVEHKV+A LTIL RGNCF SIY +SWMS+A VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS D THI W +CPYN ARS TGKEG PT+GYQVTVNHAGR
Sbjct:    5 GVGDDALLPATALAVALVALDEVQRND-LSQEEEDTAPDLPRPRLSRTQRQRKDVKTCAWAQMLEDKDL-EDSNSRTSKQFRLDFRVPYSFFLRLVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1175.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE1.310e-18176.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE8.870e-15465.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI1.170e-14566.67Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5KNX4_9PHAE7.800e-13959.39DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE2.870e-12358.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE6.520e-12355.84Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE1.470e-11758.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFR8_9PHAE1.420e-11458.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBL1_9PHAE5.960e-11358.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L642_9PHAE1.520e-10465.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1175contigP-littoralis_Contig1175:55093..58681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1379
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.11e-101
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size894
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789491.914057-UTR-P-littoralis_Contig1175:55092..552331680789491.914057-UTR-P-littoralis_Contig1175:55092..55233Pylaiella littoralis U1_48UTRP-littoralis_Contig1175 55093..55233 +
1680789491.9680498-UTR-P-littoralis_Contig1175:58337..586811680789491.9680498-UTR-P-littoralis_Contig1175:58337..58681Pylaiella littoralis U1_48UTRP-littoralis_Contig1175 58338..58681 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789491.9284594-CDS-P-littoralis_Contig1175:55233..554701680789491.9284594-CDS-P-littoralis_Contig1175:55233..55470Pylaiella littoralis U1_48CDSP-littoralis_Contig1175 55234..55470 +
1680789491.9387412-CDS-P-littoralis_Contig1175:57358..578921680789491.9387412-CDS-P-littoralis_Contig1175:57358..57892Pylaiella littoralis U1_48CDSP-littoralis_Contig1175 57359..57892 +
1680789491.9551473-CDS-P-littoralis_Contig1175:58214..583371680789491.9551473-CDS-P-littoralis_Contig1175:58214..58337Pylaiella littoralis U1_48CDSP-littoralis_Contig1175 58215..58337 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1175.12.1prot_P-littoralis_Contig1175.12.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1175 55234..58337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1175.12.1

>prot_P-littoralis_Contig1175.12.1 ID=prot_P-littoralis_Contig1175.12.1|Name=mRNA_P-littoralis_Contig1175.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=298bp
MGRRQRQRKDGSTCAWAQLLREEELLKDRTSIEARKFREDFRIPYPFFLR
LVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCFGSIYMLS
WMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFP
GAMGSTDDTHIAWGRCPYNQARSCTGKEGKPTIGYQVTVNHAGRVLAVTE
GFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLI
VDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGSSSSP*
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mRNA from alignment at P-littoralis_Contig1175:55093..58681+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1175.12.1 ID=mRNA_P-littoralis_Contig1175.12.1|Name=mRNA_P-littoralis_Contig1175.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3589bp|location=Sequence derived from alignment at P-littoralis_Contig1175:55093..58681+ (Pylaiella littoralis U1_48)
GCAGCAGAGGGAGAAGGTATCGATGGCCTCTTGCCAGAAATTGCACTCGC AACCGCCTTGGCTGCTTTCGATGAGATCCAACAAGACGACATACTATCAG ATGTGGAGGACGAGCCCGCTGAGGAACTACCGCGAGTGAAGATGGGACGA AGACAGAGGCAGAGGAAAGACGGCAGCACGTGTGCTTGGGCACAGCTGCT CCGGGAGGAAGAGCTGCTGAAGGACAGGACGAGCATAGAAGCAAGGAAGT TTCGAGAGGACTTTCGCATCCCGTACCCTTTCTTCCTGCGGCTTGTGGAA GTGGTCAAGAGCAAGGACTGGTTTGCCACTGCTCAGCACGACGCATCAGG GCGGCAAGGCCACCCAGTGGAGCATAAGGTGAGGTTAGGAGGTGCTTCAC TCACTACTTTGGCGGTTGTACAGGTGGTGGAAGCAGTAGACTGTCCGCAT GCATGTCTTGCACTATAGAGATGTGAATTCAAAAAATCGTACTAAATACA GAGCGCTGCAGGTACTGCTGTATGATGTCATACGTATAGTATCATACACC AAGTACTTCGTACTCTGTATTATAGTCTACTTCGTTCAGAGATGCTTACT TAGCAGCAATAGCGTTGCTTCCGTTCCTGTGTACGTATCATACATAAGAG GATACAAAAAGGATGTGCCCGCCCCTCTTGCAGCACTAAAGCTGGTACAC CTGTACAGCACTAGTGAGGCTGCAAAAAATATTACCGTTCTCTCGGTTAT GGTCGATGGGCATTGCTGCATGCATTGGTGTCGCGTTTTACTCGGGTGCA GGCAGTGCCTGGTTGCGTATTTGCTCGTTATCGTGGCGATCCCATAGCTG CGTAAAAAAGGCTTATTTTTCTCATGAAGCCTCAACAACACAATGATACA GCGATATGATATGATATGATCTTCGTATTTCTCCTTGATAAGCTACGTAC CAGACAAGGTTCGTGTCCCTGTCAGCTGTCGCCTTCTAGAGCAGTACTGG TACTAGAATGTCGGTGCCGCGATGTTCTAGTGTGCAGGCAACTCCTGGAT GCCGACATGTGCCGATTAGAATAAGATTATCACACCAGTGATAAAGTACT ACAGTCTGAACACCACTGATGAGACCGTTTCTTACGGCTCCATTATTTGG TCCAGCGTTTTTTCTCCTGAGGTACCCCCCCCCCCCAATAAAAGAGAGCC CAAACGGTTGAAAAATATACTTCTTGAGCATAACAGGAGATAGCACCGAG CAGAACTCGACCCCTGGGACACCAATCGAGACTATAACTGTTAAACGGTA CGCTCTAGTGTTCTCAGGTTGGCCACGGGAAATTTGGTGGGTGTGGGCTT CGGCTGTGGCGAGGTTTCGGCGGCGGAGTGGGTTGAGGTAGGAAAATCCG GTGGAAAAAAAAACGCTGTCCGAGCCTCTTTTTTGGCCGGAAAAACAGGA GCGAAGTCTGTTATTTCGTTTCATCTATTTTTCCATCTCCAACACACACC GCCGCCAAAATCTCGCCACAGCCCGAACCCACTGCCACCAAACTTCCTGT GGCCAACTTGAGAACGTAGGAGCACACGATCTATCAGGTTTGATTGGCAT CTGTGTCGTAGAGGTCGAGTTCTGGTTGGTGCTGTCGCACGATGTGTGCA ATGGCGATCAAACCTATCGTTACGTCGCTTCAGTGTTCTGAGATTGGCCA TGGCAAGTTTGATGGATGTGGGCCTTAGCTGCTGTAAGATTTTGCCGGTG GTGTACGTCGTGGTAGAATAAACAATGCCAAAAGAATCCTGTTCGAGCAG GCTCGCACGGAAACGAAACAGGCTCGAACACAGCAGTCCACACATATATA TATTTTTTGTCATTGTTTGGGATACCTCAACTCACACCGCCGCCAAAACG AATTCGACACAGCAAAAGCCCACACCCACCAAACTCCCTTCGGCTAAAAC CTCAGCACACGGGAGTGCACGCTCCAACAGGTTTGATCGCCATCGCTGCG TGCCAGAGGCCAAGTTCCGACTGGTGTTGCCGCGTGATGTGCTCAACAGt TTTTTTGTTCGGTCGTTAGGAATCTTCTCCGTTTTCGGGGGGGGGGGATG AAAATGATGACCGCATGAATACTCAGGAAACCAGAACCAGCCGTATGACC AGCCTCACATTGTTCACACCTTCTTATTTTGATAAAGCACAACACCTTAC ATGACACTCTGTGGCTGATTGCGTGGATTCCCGTCCAATCAACAAATGTT GCGATTGGTGCTATAGGTGATGGCCTGCCTGACAATACTCGCCAGAGGGA ACTGTTTCGGAAGCATCTACATGCTTTCGTGGATGAGCAGCGCGGTAGTG CAGAAGACGTTCCACAAATTCTGCAAGCACTTCGCGACGGAAATGTACGA CGAGCACATCTTCCTCCCGACGGACGAGAACGGCGAGCTTGACCGCGTTA TGGGACAGTACGAGAAGCTGGGGTTCCCGGGCGCAATGGGTTCCACTGAT GATACCCATATAGCGTGGGGTAGGTGCCCCTACAACCAAGCCCGCTCGTG CACTGGAAAGGAAGGCAAGCCTACCATCGGGTACCAGGTGACGGTCAACC ATGCTGGGCGCGTGTTGGCCGTGACAGAGGGGTTCACAGGGTCCACCAAC GACAAGACGATCATCTGCTGGGATGCAGCGGTGGACCGGATTCGCAAAGA CAAGCAGTACACGGAAAAGACATTTGACGTCTACAACAAGGATGGCACCA CGCGAACCCTGAAGGGTTGCTACTTGATCGTTGACAACGGTTACCACAAG GTGAAAAATGTTTGGTATCACATGGAACGCGATTGTGTTTTTGTCGAATC GCATGGGCATTTTTGGCCGAACAAAAGTTCCTCCCAGTTAGCCGCGCTCA AAATTGTCCCCCACGTCCTCTTGGGTGCTGTGGACATGATTGTGTGACAC TGAATTGCTCCCCATAATGGTGTTGTTGAAGCTGTGGGGGATGAAGCAGT TGACAAGTTTACACAGTTCGTTTAGTACCCAATCCTCAAAATGGAACGCG GTACAGGACGATTTATTAATACTTGATCATTCCAGGTGCGCCCtTTTTTT TCTGTTCGTTCGTTCCATTCAGTGGCGGACGCTGATCGAGCCCTCCAAGT ACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGGAGAGCGTG AGGAAGGATGTGGAGTGCTTCTTCGGATCCTCAAGCTCGCCATGACCTAC CAGGAGCAGGAGCGCATTGACTACGTGTTCTTCACGTGCTGCATCCTGCA CAACATGCTGCATACCTTCGACGGCATGGACGACCTGGAGGAGAACGTCA TCTGGGTCAGCAGTGCCGAGCTCCAGAGCACGTGGGAGCACAACGTGGAC TCCACCTCGGTCGGGACTAAGGACGTCAACGAGAAGCCCCAAATCGAGGC GGAGCCCGCGCTGCTCAAGAGGCAGCTGACCACGAGCTACCTGTACCGCA AGAAGATAAAGTGGGATATTGTTTGGCTTTCTAGGTGAACGTGTGCGTAC ACGACGTGGCGTGACACCGCAGTAGATCACGGAATGTTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1175:55093..58681+

>mRNA_P-littoralis_Contig1175.12.1 ID=mRNA_P-littoralis_Contig1175.12.1|Name=mRNA_P-littoralis_Contig1175.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=894bp|location=Sequence derived from alignment at P-littoralis_Contig1175:55093..58681+ (Pylaiella littoralis U1_48)
ATGGGACGAAGACAGAGGCAGAGGAAAGACGGCAGCACGTGTGCTTGGGC
ACAGCTGCTCCGGGAGGAAGAGCTGCTGAAGGACAGGACGAGCATAGAAG
CAAGGAAGTTTCGAGAGGACTTTCGCATCCCGTACCCTTTCTTCCTGCGG
CTTGTGGAAGTGGTCAAGAGCAAGGACTGGTTTGCCACTGCTCAGCACGA
CGCATCAGGGCGGCAAGGCCACCCAGTGGAGCATAAGGTGATGGCCTGCC
TGACAATACTCGCCAGAGGGAACTGTTTCGGAAGCATCTACATGCTTTCG
TGGATGAGCAGCGCGGTAGTGCAGAAGACGTTCCACAAATTCTGCAAGCA
CTTCGCGACGGAAATGTACGACGAGCACATCTTCCTCCCGACGGACGAGA
ACGGCGAGCTTGACCGCGTTATGGGACAGTACGAGAAGCTGGGGTTCCCG
GGCGCAATGGGTTCCACTGATGATACCCATATAGCGTGGGGTAGGTGCCC
CTACAACCAAGCCCGCTCGTGCACTGGAAAGGAAGGCAAGCCTACCATCG
GGTACCAGGTGACGGTCAACCATGCTGGGCGCGTGTTGGCCGTGACAGAG
GGGTTCACAGGGTCCACCAACGACAAGACGATCATCTGCTGGGATGCAGC
GGTGGACCGGATTCGCAAAGACAAGCAGTACACGGAAAAGACATTTGACG
TCTACAACAAGGATGGCACCACGCGAACCCTGAAGGGTTGCTACTTGATC
GTTGACAACGGTTACCACAAGTGGCGGACGCTGATCGAGCCCTCCAAGTA
CCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGGAGAGCGTGA
GGAAGGATGTGGAGTGCTTCTTCGGATCCTCAAGCTCGCCATGA
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