prot_P-littoralis_Contig693.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig693.42.1
Unique Nameprot_P-littoralis_Contig693.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length218
Homology
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 8.740e-113
Identity = 171/196 (87.24%), Postives = 185/196 (94.39%), Query Frame = 0
Query:   11 ALSYIDKGYDDPQMKQIVHSLIQDEMAAFEPLDYLADKPDPRTRFKSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRLKTL 206
            ALSYIDK YDDP+MK+IVHSLI++EMAAFEP DYLADKP P TRFKSPLLKSEWARVRAEK ++ +DTSRYDLQPPQGAAAE+E AWKR+LDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAE VN+KRKTSQE AE+TLWNLARKR+EGFDKN++IQLACEGLR EVKRLK L
Sbjct:   22 ALSYIDKDYDDPRMKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKAL 217          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.450e-43
Identity = 91/205 (44.39%), Postives = 132/205 (64.39%), Query Frame = 0
Query:    3 ASQEQHLSALSYIDKGYDDPQMKQIVHSLIQDEMAAFEPLDYLADKPDPRTRF---KSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRLK 204
            AS    + AL YIDK YDDP+ +++VH LI++EMA F P +YL D+          K  +L +E ARV     M  +D +RY+++ P GA AE+  AW+ ++ NA+AQ  HQ+NR LNLELL NYGA+ WL HNKA  G E+ + +  KR R+EA+++N +R+ +Q    + LW+L R+R E  DKNL+I LA   L+ ++K+ K
Sbjct:    2 ASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 8.230e-34
Identity = 89/208 (42.79%), Postives = 123/208 (59.13%), Query Frame = 0
Query:    8 HLSALSYIDKGYDDPQMKQIVHSLIQDEMA--AFEPLDYLADKPDPRTRF-KSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRLKTLAQAEAA 212
            +L AL YID G  DP ++  V  LI +EM    F   DYLAD+P P   F KS  + +E  RV A K M P+D SRY  + P      +  AW+ +L+N RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LR+E+KRL+T   ++AA
Sbjct:   25 NLDALPYID-GEMDPDIRARVDQLILEEMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIKRLRTDVASKAA 231          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.240e-31
Identity = 90/208 (43.27%), Postives = 123/208 (59.13%), Query Frame = 0
Query:    8 HLSALSYIDKGYDDPQMKQIVHSLIQDEMA--AFEPLDYLADKPDPRTRF-KSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRLKTLAQAEAA 212
            +L AL YID G  DP ++  V  LI +EM    F   DYLAD+P P   F KS  + +E  RV A K M P+D SRY  + P      +  AW+ +L+N RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LR+E+KRL+T   +EAA
Sbjct:    9 NLDALPYID-GEMDPDIRVRVDQLILEEMRNPRFSKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIKRLRTDVASEAA 215          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 7.180e-27
Identity = 78/199 (39.20%), Postives = 118/199 (59.30%), Query Frame = 0
Query:    9 LSALSYIDKGYDDPQMKQIVHSLIQDEMAAF--EPLDYLADKPD-PRTRFKS-PLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRL 203
            + AL YID    D + +     LI++E+     +P DYLA  P  P +RF+  P+L+ E+ARV+A K ME MDTSR+ L PP  +   +  AW+ + DNA +Q EHQ+NRLLNLELL  +G +    HNK+ EG    +  + ++ +++ +S+N +RK SQE   R L  + ++      KN++I +AC+ L  EV  L
Sbjct:   20 IDALPYIDGMTSDDRHQ--AEELIKEELKKSNKKPSDYLASFPPLPASRFEGHPILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYNRLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEVSEL 216          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A3M7PSE4_BRAPC (Pre-mRNA-splicing factor SPF27 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7PSE4_BRAPC)

HSP 1 Score: 106 bits (264), Expect = 1.120e-24
Identity = 69/205 (33.66%), Postives = 115/205 (56.10%), Query Frame = 0
Query:    9 LSALSYIDKGYDDPQMKQIVHSLIQDEMAAFEPLDYLADKPDPRT--RFKSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLR---VEVKRLKTLAQ 208
            + AL YID GY++P++KQ+V SLI++E   ++P     +   P     F++ +LK+E+ R+   + ME M   RY+L PP      +  AW  S++N++AQ EHQ +R++NLELL +YGA+ W  +N+  +        Q +  ++  ++VN+ RK  Q  A   L NL +K      KN +I+ A   L    +++K+ K  A+
Sbjct:    7 VDALPYIDSGYEEPEVKQMVFSLIEEECRRYKPTKNYLEVFGPTNLHAFETDILKNEFQRMEQRQPMEMMSMKRYELLPPSSGKQSDVSAWLESVENSQAQLEHQISRIVNLELLSDYGANSWKTYNQTLKSMTDQAEKQLEDLKKNIQNVNLSRKYEQTSAGSKLDNLEKKWIGLVSKNYEIECAIVELEKELIDIKKKKISAE 211          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A200R445_9MAGN (Pre-mRNA-splicing factor SPF27 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R445_9MAGN)

HSP 1 Score: 106 bits (264), Expect = 1.950e-24
Identity = 73/204 (35.78%), Postives = 118/204 (57.84%), Query Frame = 0
Query:    9 LSALSYIDKGYDDPQMKQIVHSLIQDEM--AAFEPLDYLADKPD-PRTRFKS-PLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWN-LARKRAEGFDKNLKIQLACEGLRVEVKRLKTLA 207
            + +L YID  Y DP +K++V  L+++EM  +  +P DYL D P  P++ F++ P+L  E+ RVRA K    ++ SRY L+PP G    +  AWK  L+NA++  +HQ  RL NL+L+  +G  +W  HN+  E   + + + A+   E  ESVN +RK  Q+       N L+ +  E  +KN++IQ AC  +   ++ L++ A
Sbjct:   28 IDSLPYIDDDYGDPNVKEVVDKLVEEEMRRSTKKPADYLKDLPPAPKSNFENHPMLAREYERVRAGKPPVTLEMSRYGLEPPPGNKWNDANAWKLHLENAQSSLQHQIVRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAMAQGYNERIESVNRERKYHQQQNTAVELNALSMQWKELCEKNIEIQSACAAIENHIEGLRSEA 231          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A834YNA2_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YNA2_9MAGN)

HSP 1 Score: 105 bits (262), Expect = 3.680e-24
Identity = 74/204 (36.27%), Postives = 117/204 (57.35%), Query Frame = 0
Query:    4 SQEQHLSALSYIDKGYDDPQMKQIVHSLIQDEM--AAFEPLDYLADKPD-PRTRFKS-PLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRL 203
            S+EQ + AL YID  Y DP +K+ V  L+++EM  +  +P D+L D P  P++ FK+ P+L  E+ RV++ K    +D SRY L+PP      +E AWK +L+ A+   +HQ  RL NL+L+  +GA +W  HN+  E   + + + A    E+ E VN +RK  Q+     L  L+ +  E  +KN++IQ AC  +   ++ L
Sbjct:   25 SKEQIIDALPYIDDDYGDPNVKEDVDRLVEEEMRRSTKKPADFLKDLPPLPKSNFKNHPMLAREYERVKSGKPPVALDMSRYGLEPPPVNKRNDETAWKLALEKAQRLLQHQVVRLENLDLMSKHGADVWKHHNQQLEAFLSRMQAMALGQNEKIEIVNRERKYHQQNTAVELDALSAQWKELCEKNIEIQAACAMIENHIEEL 228          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A1Y1W5F2_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5F2_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 5.260e-24
Identity = 76/196 (38.78%), Postives = 108/196 (55.10%), Query Frame = 0
Query:    9 LSALSYIDKGYDDPQMKQIVHSLIQDEMAAFEPLDYLADKPDPRTRFKS-PLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRL 203
            + +L YIDK YDDP M+  V SLIQ EM    P       P   T FK+  LL+ E+ RVRA K +   D  RY L+ P+ +  ++   W+ + +NA AQ EHQ+ RL+NLELLQ +GA+ W   N  +EG    +     R R+E  +VN  RK  Q  A   L ++  +  EG  K ++IQ+A   L+ E+ +L
Sbjct:    8 IDSLPYIDKEYDDPSMRDQVSSLIQKEMGRMSP----PLLPKSTTLFKNNDLLRKEYERVRAGKPLPEFDIERYKLEAPEDS--DSVGIWRSAAENAAAQLEHQNIRLVNLELLQQFGANSWKLSNYQKEGLLRNIEKATDRHRDEGINVNKARKYEQTEAGIRLRDIEERWTEGVKKCIEIQVASSELKGEIAQL 197          
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Match: A0A1Y1I6E7_KLENI (BCAS2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6E7_KLENI)

HSP 1 Score: 103 bits (258), Expect = 1.150e-23
Identity = 75/204 (36.76%), Postives = 116/204 (56.86%), Query Frame = 0
Query:    6 EQHLSALSYID-KGYDDPQMKQIVHSLIQDEM--AAFEPLDYLADKPD-PRTRFKS-PLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRSLDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEVKRLK 204
            ++ + AL YID +G  D   K+ V  +I DEM  +  +P DYLA+ P  P   F++ PLL  E+ RV+A K   P+D SRY + PP  +   +  AW+ ++ NA+AQ  HQ  R+ NL+L+  YGA+ WL HN+  + T   +    +  R+E ++ N +RK++QE A   +  L+ +  E   KNL I  AC+ L  +V  L+
Sbjct:   25 DEDIDALPYIDMQGVTDQSWKKEVERMIADEMKRSTKKPADYLAELPPAPTLNFENCPLLAKEYERVKAGKPPIPLDNSRYKVDPPIKSRQGDLAAWRSAVANAQAQLRHQEIRIENLDLMLKYGANAWLTHNQHLDATSTRLQGIQEAYRDEIDTTNKQRKSTQESAAFEIDRLSSQWLELVRKNLDISAACQVLEEKVDALR 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig693.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2U2_9PHAE8.740e-11387.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMV2_9STRA1.450e-4344.39Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
W7TEH7_9STRA8.230e-3442.79Breast carcinoma amplified sequence 2 n=1 Tax=Nann... [more]
A0A4D9DBM6_9STRA1.240e-3143.27Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A5J4YGH3_9CHLO7.180e-2739.20Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Tre... [more]
A0A3M7PSE4_BRAPC1.120e-2433.66Pre-mRNA-splicing factor SPF27 n=1 Tax=Brachionus ... [more]
A0A200R445_9MAGN1.950e-2435.78Pre-mRNA-splicing factor SPF27 n=1 Tax=Macleaya co... [more]
A0A834YNA2_9MAGN3.680e-2436.27Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
A0A1Y1W5F2_9FUNG5.260e-2438.78Breast carcinoma amplified sequence 2 n=2 Tax=Lind... [more]
A0A1Y1I6E7_KLENI1.150e-2336.76BCAS2 n=1 Tax=Klebsormidium nitens TaxID=105231 Re... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 9..207
e-value: 3.6E-51
score: 173.8
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 4..210
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 4..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig693contigP-littoralis_Contig693:119084..122005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig693.42.1mRNA_P-littoralis_Contig693.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig693 119022..122692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig693.42.1 ID=prot_P-littoralis_Contig693.42.1|Name=mRNA_P-littoralis_Contig693.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp
MAASQEQHLSALSYIDKGYDDPQMKQIVHSLIQDEMAAFEPLDYLADKPD
PRTRFKSPLLKSEWARVRAEKAMEPMDTSRYDLQPPQGAAAENEVAWKRS
LDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRA
REEAESVNIKRKTSQEVAERTLWNLARKRAEGFDKNLKIQLACEGLRVEV
KRLKTLAQAEAAKGSPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27