prot_P-littoralis_Contig69.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.13.1
Unique Nameprot_P-littoralis_Contig69.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length236
Homology
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A6H5KSS9_9PHAE (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS9_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 1.150e-140
Identity = 210/236 (88.98%), Postives = 225/236 (95.34%), Query Frame = 0
Query:    1 MDDGVTSESGQQTKDNLFDLENGGGQ-LDDSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            MDD + SE+G Q KD LFDLENGG + LDDSDLNEDVA+LR+ WRNEV APELL +DEHLVSDL+QQ+ENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATAD +M+GRLSDREREHAKGYVDMLEDHF+RTCLSQMPSNFRSLTNT+QEENMVQEPNLDTFVVCRA+DDVGLVQIGEAAGRE+SSM+LRQGDMFIVRYRPIRTLVLEGRVDLI
Sbjct:    1 MDDEIASEAGPQDKDTLFDLENGGTEPLDDSDLNEDVAKLRTLWRNEVCAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLEGRVDLI 236          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: D8LTQ1_ECTSI (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ1_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 2.950e-120
Identity = 180/196 (91.84%), Postives = 191/196 (97.45%), Query Frame = 0
Query:   40 RSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            R+ WRNEVSAPELL +DEHLVSDL+QQ+ENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLAT D +M+GRLSDREREHAKGYVDMLEDHF+RTCLSQMPSNFRSLTNT+QEENMVQEPNLDTFVVCRA+DDVGLVQIGEAAGRE+SSM+LRQGDMFIVRYRPIRTLVL GRVDLI
Sbjct:   41 RTLWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A7S1CA29_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA29_9STRA)

HSP 1 Score: 162 bits (410), Expect = 9.840e-46
Identity = 88/206 (42.72%), Postives = 138/206 (66.99%), Query Frame = 0
Query:   29 DSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDL 234
            DS  N D+ R++ A+ NE ++PELL  +  LV DL+     Q E++ DARA+  EAF+ASLYQME+DR+++ +S YLRTRL K++R A+H+L T++  M  R+S  E     GYVD LE HF ++ +  +P+ +R LT++++  +MV+ PN DT V CR  +DVG  Q+ + A  E  S+++  G+ F+V++  +R+LV  G+V+L
Sbjct:   65 DSLRNMDIVRIKRAFLNEKTSPELLPYEADLVQDLVDATTQQSEVIADARATTAEAFAASLYQMEIDRVKFLVSSYLRTRLFKIQRYAVHLLRTSE--MHARMSPEEERFTVGYVDALEQHFHKSFMDAVPAKYRGLTDSSKRTDMVRRPNADTHVFCRVVEDVGDHQLDDDAFAEPLSLSI--GNAFVVKFSSVRSLVEAGKVEL 266          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A8K1CTT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTT8_PYTOL)

HSP 1 Score: 157 bits (398), Expect = 1.420e-44
Identity = 96/214 (44.86%), Postives = 137/214 (64.02%), Query Frame = 0
Query:   27 LDDSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
             D  +LNEDV R+++ W NE++APE+L  D+ +V++++ QI+NQQE VD      A  + E AF   LYQME+DRL+Y +S YLRTRLRK E+ A H+L   D  +  RLS +E + AK YV + ++H S   L++ P   RSLT     E MV EP+LD+FV C +K+ +G +Q  +  G E  SM+  QGD  +VRYR ++  V EG+V L+
Sbjct:   11 FDRENLNEDVERMQTLWLNEINAPEILPYDDEMVAEMLDQIKNQQEYVDSVSEDKAALTEERAFINKLYQMEIDRLKYMVSSYLRTRLRKTEKFAQHILN--DPVLTQRLSQKEIQFAKQYVMLFDNHVSELALARFPDEHRSLT----AEGMVVEPDLDSFVFCESKESLGQLQCDDN-GVEYISMH--QGDRHVVRYRSVKNHVEEGQVGLL 215          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A6A3MJ49_9STRA (DNA replication complex GINS protein SLD5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJ49_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.700e-44
Identity = 90/214 (42.06%), Postives = 136/214 (63.55%), Query Frame = 0
Query:   27 LDDSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
             D  +LNEDV  +R  W NE++APE+L  +E +V+++++QI NQQE VD      A+ + E++F   LYQME+DRLRY++S YLRTRLRK+E+ A+ +L+  D  +  RLS +ER  A+ +V + E H +   L++    +RSLT    +E MV EPNLD+FV C  K+    VQ+ E  G     + + Q D +++RYR I++ V  G++ LI
Sbjct:   17 FDRDNLNEDVVNMRILWVNELNAPEILRYNEEMVAEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYTVSSYLRTRLRKIEKFAIQILS--DPTLTQRLSLKERNFAQQFVMLFESHVNELALNKFNQEYRSLT----DEGMVSEPNLDSFVFCEGKEGAEAVQVDEKGG---DFVQMHQADRYVLRYRSIKSQVESGKIGLI 221          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A024TMS8_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMS8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.990e-44
Identity = 89/212 (41.98%), Postives = 135/212 (63.68%), Query Frame = 0
Query:   29 DSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            + +LNEDVA LR AW NE++APELL+    L+SD+++Q++NQQ  VDD  A     + E +F+  LYQME+DR++Y L+ YLR RLRK+E+  +HVL  + ++M    S  E ++A  + D+ E H     LS++P+  + L     E +M+  PNLD FV C+  +D+G VQI +   R    +N R+ D  ++RYR +R+LV EG+V L+
Sbjct:    7 EENLNEDVALLRDAWVNELNAPELLSFQTDLISDMVEQVQNQQSYVDDMSADVATLTEERSFTNKLYQMEIDRIKYMLASYLRIRLRKIEQHTMHVLNESLDKM----SRGEIDYAHSFKDLYESHCRDLLLSRLPNEHQQL----DEPHMIDHPNLDAFVFCQTVEDIGNVQIDD---RGSEHVNARKNDRHVLRYRVVRSLVEEGKVTLL 207          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: K3X7K8_GLOUD (DNA replication complex GINS protein SLD5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K8_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 1.170e-43
Identity = 93/215 (43.26%), Postives = 133/215 (61.86%), Query Frame = 0
Query:   26 QLDDSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            + D  +LNEDV R+R+ W NE++APE+L  DE +VS+++ QI NQQE VD         + E AF   LYQME+DRL+Y +S YLRTRLRK+E+ ALH+L+  D  +  RLS +E   AK YV + E H +   L +     RS+T+    E M+ EP+LDTFV C +K  +G +Q  +   R    + +R+ D  ++RYR ++T V +G V LI
Sbjct:   11 EFDQENLNEDVTRMRALWINEMNAPEILPYDEEIVSEMLDQIRNQQEYVDSVSEDKDSLTEERAFVNKLYQMEIDRLQYMVSSYLRTRLRKIEKFALHLLS--DAVLSQRLSQKELNFAKQYVVLFETHVNDLALGKFAEEHRSITS----EGMIVEPDLDTFVFCESKTVLGQLQCDD---RGAEYITMRKSDRHVLRYRAVKTQVEDGSVALI 216          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: W4GLW1_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLW1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.540e-43
Identity = 89/212 (41.98%), Postives = 133/212 (62.74%), Query Frame = 0
Query:   29 DSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARA-----SPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            + +LNEDVA LR AW NE++APELLT    L+SD+++Q++NQQ  VD+  A     + E +F+  LYQME+DR++Y L+ YLR RL K+ER   HVL  + +    +LS  E ++A  Y D+ E H     LS++P + + L     E +M+  P+LDTFV C++  D+G VQI +   R    +N R+ D  ++RYR + +LV EG+V L+
Sbjct:    7 EENLNEDVALLRDAWANELNAPELLTFQTDLISDMVEQVQNQQSYVDEMSADVATLTEERSFTNKLYQMEIDRIKYMLASYLRLRLMKIERHTRHVLHASMD----KLSPGEVDYAHSYKDLYESHCRDLLLSKLPPDHQQL----DEPHMIDHPDLDTFVFCQSNQDIGNVQIDD---RGSEHVNARKDDRHVLRYRVVSSLVEEGKVKLL 207          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A8J5IXW6_9STRA (DNA replication complex GINS protein SLD5 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IXW6_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.340e-42
Identity = 91/215 (42.33%), Postives = 134/215 (62.33%), Query Frame = 0
Query:   26 QLDDSDLNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDD-----ARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            + D  +LNEDV R+R+ W NE++APE+L  DE +VS++++QI NQQE VD      A+ + E++F   LYQME+DRLRY +S YLRTRL K+E+ A+H+L+  D  +  RLS +ER  A+ +V + E H +   L +     R+LT     E MV EPNLD+FV C+ K+  G VQ  +  G     + +   D +++RYR ++  V  G +DLI
Sbjct:    8 EFDQENLNEDVQRMRTLWVNELNAPEILQYDEEMVSEMLEQIRNQQEYVDSVYEDRAQLTEEKSFVNKLYQMEIDRLRYMVSSYLRTRLHKIEKFAIHILS--DAVLTQRLSVKERNFAQQFVMLFESHVNDLALGKFTKENRTLT----AEGMVPEPNLDSFVFCQGKE-AGGVQCDDKGG---DFVQVTSADRYVLRYRSVQEHVQAGTIDLI 212          
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Match: A0A7S2C5M9_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5M9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.780e-42
Identity = 84/204 (41.18%), Postives = 130/204 (63.73%), Query Frame = 0
Query:   32 LNEDVARLRSAWRNEVSAPELLTLDEHLVSDLMQQIENQQEIVDDARASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHFSRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEAAGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI 235
            LNED+ +LR+AW  E + P++   DE L +D+ +QI+NQQ  +D      +EAF+ASLYQME+DR+++SL++YLRTRL KVE   LH+LA+ +++   +LS  E ++A+ Y  ++++HF+   L ++P  FR         + ++ PN DT+V CR K+D+G VQ+       DS   L  GD+ ++RY PI+ LV    V LI
Sbjct:    9 LNEDIGKLRNAWVAESTCPDIRPFDEDLFADVSEQIQNQQAFIDKTVTETDEAFTASLYQMEIDRVKFSLARYLRTRLLKVESQVLHILASPEQK--AKLSPAELDYAEKYERLVKEHFTHCVLDELPEPFRKFGEADDAGDALR-PNQDTYVFCRIKEDLGEVQLDHTM---DSRTPLNAGDLQVLRYLPIQALVENDEVVLI 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSS9_9PHAE1.150e-14088.98DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
D8LTQ1_ECTSI2.950e-12091.84DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A7S1CA29_9STRA9.840e-4642.72DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A8K1CTT8_PYTOL1.420e-4444.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3MJ49_9STRA1.700e-4442.06DNA replication complex GINS protein SLD5 n=4 Tax=... [more]
A0A024TMS8_9STRA8.990e-4441.98DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
K3X7K8_GLOUD1.170e-4343.26DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
W4GLW1_9STRA2.540e-4341.98DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A8J5IXW6_9STRA2.340e-4242.33DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
A0A7S2C5M9_9STRA2.780e-4241.18DNA replication complex GINS protein SLD5 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableGENE3D1.20.58.1030coord: 22..224
e-value: 3.4E-61
score: 208.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 179..235
IPR008591GINS complex subunit Sld5PIRSFPIRSF007764GINS_Sld5coord: 14..235
e-value: 9.2E-47
score: 157.6
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 28..235
IPR031633DNA replication complex GINS protein SLD5, C-terminalPFAMPF16922SLD5_Ccoord: 178..235
e-value: 3.0E-17
score: 62.6
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 59..127
e-value: 3.5E-4
score: 21.0
IPR038749GINS complex protein Sld5, alpha-helical domainCDDcd11711GINS_A_Sld5coord: 35..155
e-value: 8.47199E-44
score: 141.594
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 33..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:83496..90883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.13.1mRNA_P-littoralis_Contig69.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 79574..91479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.13.1 ID=prot_P-littoralis_Contig69.13.1|Name=mRNA_P-littoralis_Contig69.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=236bp
MDDGVTSESGQQTKDNLFDLENGGGQLDDSDLNEDVARLRSAWRNEVSAP
ELLTLDEHLVSDLMQQIENQQEIVDDARASPEEAFSASLYQMELDRLRYS
LSKYLRTRLRKVERDALHVLATADEQMEGRLSDREREHAKGYVDMLEDHF
SRTCLSQMPSNFRSLTNTTQEENMVQEPNLDTFVVCRAKDDVGLVQIGEA
AGREDSSMNLRQGDMFIVRYRPIRTLVLEGRVDLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008591GINS_Sld5
IPR031633SLD5_C
IPR021151GINS_A
IPR038749Sld5_GINS_A
IPR036224GINS_bundle-like_dom_sf