prot_P-littoralis_Contig683.2.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig683.2.2
Unique Nameprot_P-littoralis_Contig683.2.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length267
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig683.2.2 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 8.720e-55
Identity = 116/225 (51.56%), Postives = 129/225 (57.33%), Query Frame = 0 
Query:    5 QSSLDLSLRWEGLVLKDVELRRDFMSELLGLPVDVPHAFVRRAVLHLPWYTLMLGSVVAKLEGVTIVMRGDASTAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGRQKQVPRWLKWILRRLKVKLVDVTLRYESVGMCPLQGAPAAAIEVTLGSLEVQPVSLQGASAWFQQQARAQQKSQQHQYRE 229
            +SSLDLSLRWEG+VLKDVELRRDF+SELLGLPVDVPHAFVRRAVLHLPWYTL+LG                                                                                      + GRQ+ +PRWLKW+LRRLKVKL DVTLRYESVGMCPLQGA  AA+EVTLGSLEVQPVSLQGASAWF++Q +A+ KS Q  YRE
Sbjct:  192 ESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGP-------------------------------------------------------------------------------------KAGRQRPMPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRQVQAEHKSLQ--YRE 329
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig683.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI8.720e-5551.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13-like, N-terminal domainPFAMPF12624Chorein_Ncoord: 4..82
e-value: 9.4E-11
score: 41.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig683contigP-littoralis_Contig683:1067..4333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig683.2.2mRNA_P-littoralis_Contig683.2.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig683 1067..4333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig683.2.2 ID=prot_P-littoralis_Contig683.2.2|Name=mRNA_P-littoralis_Contig683.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
EDGSQSSLDLSLRWEGLVLKDVELRRDFMSELLGLPVDVPHAFVRRAVLH
LPWYTLMLGSVVAKLEGVTIVMRGDASTAKAAAAAAATAAPRDSDGAAAP
QRGGGDGSDGHRHDQGPGSSCTAPPQQQQQQQQRAESGSSGRSRSRTGRQ
KQVPRWLKWILRRLKVKLVDVTLRYESVGMCPLQGAPAAAIEVTLGSLEV
QPVSLQGASAWFQQQARAQQKSQQHQYREELLLRGLAVSVEPLVDPPSPL
PPPAAGATTADNAGTSS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13-like_N