prot_P-littoralis_Contig68.48.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig68.48.1
Unique Nameprot_P-littoralis_Contig68.48.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length266
Homology
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGGIYD GSN+VY QP+S  PP    G  +RCGRCGR+ H    CAAPRRFEG
Sbjct:  363 GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRNDHHAIDCAAPRRFEG 416          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 4.090e-12
Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGGIYD GSN+VY QP+S  PP    G  +RCGRC R GH    CAAPRRFEG
Sbjct:  477 GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEG 530          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.250e-11
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGGIYD GSN+VY QP+S  PP       +RC RCGR GH    CAAPRRFEG
Sbjct:  233 GVGGIYDCGSNAVYHQPESLPPPGAPMSTVHRCCRCGRHGHHAIDCAAPRRFEG 286          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.770e-10
Identity = 33/54 (61.11%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGGIYD GSN+VY QPKS  PP    G+ +RCGR     H    CAAPRRFEG
Sbjct:  363 GVGGIYDCGSNAVYHQPKSLPPPGAPMGIVHRCGRXXXXXHHAIGCAAPRRFEG 416          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5KIP6_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.290e-9
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   75 FGVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEGYCGACTQFGHMRK 142
            +G GG+YD G N+VY Q +S  P     GV ++C RCGR GH    C APRRFEG C A     H R+
Sbjct:  321 WGSGGLYDCGRNAVYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRR 388          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5L4A7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.340e-9
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   75 FGVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEGYCGACTQFGHMRK 142
            +G GG+YD G N+VY Q +S  P     GV ++C RCGR GH    C APRRFEG C A     H R+
Sbjct:  321 WGSGGLYDCGRNAVYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRR 388          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5KYI1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI1_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.400e-9
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   75 FGVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEGYCGACTQFGHMRK 142
            +G GG+YD G N+VY Q +S  P     GV ++C RCGR GH    C APRRFEG C A     H R+
Sbjct:  321 WGSGGLYDCGRNAVYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRR 388          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 5.580e-8
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGG+YD GSN+V  QP+S  PP    G  +RCGR     H    CAAPRRFEG
Sbjct:  435 GVGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEG 488          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.420e-7
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGGIYD GS++VY QP+S  PP+   G  +RCGR          CAAPRRFEG
Sbjct:  435 GVGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 488          
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.060e-7
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   76 GVGGIYDNGSNSVYFQPKSPIPPNIQQGVEYRCGRCGRSGHKPEICAAPRRFEG 129
            GVGG YD GSN+VY QP+S  PP    G  +RCGR          CAAPRRFEG
Sbjct:  218 GVGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JBS7_9PHAE1.500e-1264.81CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYB5_9PHAE4.090e-1264.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV09_9PHAE3.250e-1162.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU47_9PHAE3.770e-1061.11CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KIP6_9PHAE1.290e-948.53CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L4A7_9PHAE1.340e-948.53CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYI1_9PHAE1.400e-948.53CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JN41_9PHAE5.580e-855.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVD9_9PHAE1.420e-755.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN1_9PHAE3.060e-755.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..266
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 105..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:272543..273340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.48.1mRNA_P-littoralis_Contig68.48.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig68 272543..273340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig68.48.1 ID=prot_P-littoralis_Contig68.48.1|Name=mRNA_P-littoralis_Contig68.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp
SGGQRQYAGGGGGGRYTAGRGGQQQQQWQQGGGRQQPQQQQQQQFQQQQP
QQQQQPPQRPQQQQQQPSNQSGGRFGVGGIYDNGSNSVYFQPKSPIPPNI
QQGVEYRCGRCGRSGHKPEICAAPRRFEGYCGACTQFGHMRKNYAINGLS
ASPAAPPHVHAIAPAGAAGSAAAHGWGCGGRGDLSSQQLVADQGGDDIPS
QPGGEAYGGGVDGGGGFPRAPADGQMSSAFVAPNSGDGVGDGWNTGLALQ
QQIPGREHQQHSDGEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf